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The map label for this gene is yqaE [H]

Identifier: 52785200

GI number: 52785200

Start: 1426149

End: 1426517

Strand: Reverse

Name: yqaE [H]

Synonym: BLi01433

Alternate gene names: 52785200

Gene position: 1426517-1426149 (Counterclockwise)

Preceding gene: 52785252

Following gene: 52785199

Centisome position: 33.78

GC content: 37.4

Gene sequence:

>369_bases
ATGAAATTCGGAGATCGACTTAGAGAACTCAGGAAAATGAGGCCGAATCTTTCTCAAAAAAAATTAGGGGAACATTTAGG
TCTTGCAGAAAGCACAATTAGTATGTATGAGCAAAATAGAAGAGAACCGGAATATGAAATTCTAATTAAAATAGCTGATT
ATTTCGATGTTTCAATTGACTACTTACTTCGAGGCACTGATCCGAAGGTTCAAGATAAAATCTTTGAAGACGAAGCAAAG
AGGATTCTAAATGACCCTAAAACCTTCATCGCGGCTCGTGATGGAGAAATTACACAGGAGATTTTAGATGCTGCCCTTGA
AATCATTACGGAGCAACTGAAAGAAGGCGGGAAAAAGAAATCTGACTAA

Upstream 100 bases:

>100_bases
TCTATTATATTAAACCGCACGATTCGTAAAGTCAATACATATTGTGAAGTTTTTTTGTAAAGCGTCACGAATCGTGATAT
TATCTATAAAGGTGATGAAT

Downstream 100 bases:

>100_bases
GCAAGGAGTGACAGCATGGAGTGGAATTTAAAGGAGTTATTTTTATGACTTTAGGAGAAAGGTTAAAAATGTTGAGAAAT
AAACAAAAACCTAAGCTCTC

Product: YqaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKFGDRLRELRKMRPNLSQKKLGEHLGLAESTISMYEQNRREPEYEILIKIADYFDVSIDYLLRGTDPKVQDKIFEDEAK
RILNDPKTFIAARDGEITQEILDAALEIITEQLKEGGKKKSD

Sequences:

>Translated_122_residues
MKFGDRLRELRKMRPNLSQKKLGEHLGLAESTISMYEQNRREPEYEILIKIADYFDVSIDYLLRGTDPKVQDKIFEDEAK
RILNDPKTFIAARDGEITQEILDAALEIITEQLKEGGKKKSD
>Mature_122_residues
MKFGDRLRELRKMRPNLSQKKLGEHLGLAESTISMYEQNRREPEYEILIKIADYFDVSIDYLLRGTDPKVQDKIFEDEAK
RILNDPKTFIAARDGEITQEILDAALEIITEQLKEGGKKKSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14172; Mature: 14172

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGDRLRELRKMRPNLSQKKLGEHLGLAESTISMYEQNRREPEYEILIKIADYFDVSID
CCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YLLRGTDPKVQDKIFEDEAKRILNDPKTFIAARDGEITQEILDAALEIITEQLKEGGKKK
HHCCCCCCHHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SD
CC
>Mature Secondary Structure
MKFGDRLRELRKMRPNLSQKKLGEHLGLAESTISMYEQNRREPEYEILIKIADYFDVSID
CCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YLLRGTDPKVQDKIFEDEAKRILNDPKTFIAARDGEITQEILDAALEIITEQLKEGGKKK
HHCCCCCCHHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]