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The map label for this gene is yrkC [H]

Identifier: 52785252

GI number: 52785252

Start: 1461102

End: 1461695

Strand: Reverse

Name: yrkC [H]

Synonym: BLi01487

Alternate gene names: 52785252

Gene position: 1461695-1461102 (Counterclockwise)

Preceding gene: 52785253

Following gene: 52785200

Centisome position: 34.62

GC content: 37.54

Gene sequence:

>594_bases
ATGTATTATGTTCCTCATATGTATCCATATCAATATTCTTATCCTTATTATGTTAATGTGCCAATGTACAACTGTAGAAG
ACAGTCAGTTCACCGGACTGTTCCTAGTGAAGTAGAGCATGCAAACAAATTAAGTTCTGTTCGCTCATCCAAAGGTAGTA
ACAGCATTTTGTTAAAGGATTATGGACCAGAAGCGTTTGTGGTTAATATCAATGAAGCTACGAAGCAAAATAATACGTAC
CGTACCGCTTTATGGACAGGAACTCATTTGCAAGTCACCTTAATGAGTCTCAATGTTGGAGAAGATATTGGTTTGGAAAT
GCACCCTAACGTTGATCAATTCTTACGTGTTGAACAAGGTCAGGGAATCGTTCAAATGGGCAAGAATAAAGACCATTTAA
ATTTCAAAAGAAATGTCTATGATGATTCTGCAATCATAATACCCGCTGGAACATGGCACAATCTAACCAATACAGGTAGA
ATCCCGCTAAAACTATACTCCATATATGCTCCTCCTAACCATCCATTTGGTACTGTTCATGTTACTAAAGGAGATGCATT
AGCTTCAGAAGAAGAATACGGTCATGGCAATTGA

Upstream 100 bases:

>100_bases
AACACCATTGACTTTGAACAAAAATTGGTATCTAAGTACATTCCCTGAGCATAATGCATAGGATTAATTCATATAAAGCT
TTGAAGGGATTGAGAAAAAA

Downstream 100 bases:

>100_bases
AATAGTATGCTTGGCATAACTCCAATAAGTTGATACAGAAAACAGATCTTTTCAGAAATAAAATTAATCAAAAAAGCAGG
CCGAATGCCTGCTTTAGTTT

Product: YrkC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MYYVPHMYPYQYSYPYYVNVPMYNCRRQSVHRTVPSEVEHANKLSSVRSSKGSNSILLKDYGPEAFVVNINEATKQNNTY
RTALWTGTHLQVTLMSLNVGEDIGLEMHPNVDQFLRVEQGQGIVQMGKNKDHLNFKRNVYDDSAIIIPAGTWHNLTNTGR
IPLKLYSIYAPPNHPFGTVHVTKGDALASEEEYGHGN

Sequences:

>Translated_197_residues
MYYVPHMYPYQYSYPYYVNVPMYNCRRQSVHRTVPSEVEHANKLSSVRSSKGSNSILLKDYGPEAFVVNINEATKQNNTY
RTALWTGTHLQVTLMSLNVGEDIGLEMHPNVDQFLRVEQGQGIVQMGKNKDHLNFKRNVYDDSAIIIPAGTWHNLTNTGR
IPLKLYSIYAPPNHPFGTVHVTKGDALASEEEYGHGN
>Mature_197_residues
MYYVPHMYPYQYSYPYYVNVPMYNCRRQSVHRTVPSEVEHANKLSSVRSSKGSNSILLKDYGPEAFVVNINEATKQNNTY
RTALWTGTHLQVTLMSLNVGEDIGLEMHPNVDQFLRVEQGQGIVQMGKNKDHLNFKRNVYDDSAIIIPAGTWHNLTNTGR
IPLKLYSIYAPPNHPFGTVHVTKGDALASEEEYGHGN

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 22390; Mature: 22390

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYVPHMYPYQYSYPYYVNVPMYNCRRQSVHRTVPSEVEHANKLSSVRSSKGSNSILLKD
CEECCCCCCCEECCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
YGPEAFVVNINEATKQNNTYRTALWTGTHLQVTLMSLNVGEDIGLEMHPNVDQFLRVEQG
CCCCEEEEECCHHHCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEECCCHHHHEEECCC
QGIVQMGKNKDHLNFKRNVYDDSAIIIPAGTWHNLTNTGRIPLKLYSIYAPPNHPFGTVH
CCEEEECCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEE
VTKGDALASEEEYGHGN
EECCCCCCCCCCCCCCC
>Mature Secondary Structure
MYYVPHMYPYQYSYPYYVNVPMYNCRRQSVHRTVPSEVEHANKLSSVRSSKGSNSILLKD
CEECCCCCCCEECCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
YGPEAFVVNINEATKQNNTYRTALWTGTHLQVTLMSLNVGEDIGLEMHPNVDQFLRVEQG
CCCCEEEEECCHHHCCCCCEEEEEEECCEEEEEEEEEECCCCCCEEECCCHHHHEEECCC
QGIVQMGKNKDHLNFKRNVYDDSAIIIPAGTWHNLTNTGRIPLKLYSIYAPPNHPFGTVH
CCEEEECCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEE
VTKGDALASEEEYGHGN
EECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]