Click here to switch to the map view.

The map label for this gene is yqaB [H]

Identifier: 52785196

GI number: 52785196

Start: 1423771

End: 1424247

Strand: Reverse

Name: yqaB [H]

Synonym: BLi01429

Alternate gene names: 52785196

Gene position: 1424247-1423771 (Counterclockwise)

Preceding gene: 52785197

Following gene: 52785195

Centisome position: 33.73

GC content: 35.43

Gene sequence:

>477_bases
GTGTATACAAAAAGTCATTTAGAAGATTGGATTGAAAACTTGTACAGAAGCATCAGTATCATTACACCAGAGCAAATTGA
TTTCGAGCGTATAGCTGAGTTGTTAGGCATAAGTGTTTATTTTAAGCCTATCCCAAGTTGTTCTTTCAAGTATAATGACG
TGTATACGATTATATTAGATAGCCGGAAAACCCGTTTCGAGCAGTGGGACGACTTTGCTCATGAACTATGCCACCTTTAC
AGACATGAAGGAGATAAAAAAACAATGCCAAAGTTTTGGTCAGATTATCAGGAGAGACAAGCCAATTACTTCTCATATCA
CTTTTGCATCCCCACTTTTATGCTTCATGGAATGAAAATTCCACAAAATCATTTTTTTGACGCTCACCTCATTTCTAAGA
TGTTTAAAGTCACTGAACCATTTGCGAAAGTACGCCTTAACATGTACTTTAACAAAATTCATCTTATTGTTAGTTAA

Upstream 100 bases:

>100_bases
AGGGGCTTTTCTTTTCACTAAATAACAGAACGTATGTTTCCTTTGTTTTAAATAAGAATTACCTCAATTTGATAAATGGG
CTTAGGAGGCGTTCTTCTTG

Downstream 100 bases:

>100_bases
AAGAAACTTTAAATAGGATTGGGGGGATAATATGGCTTCATTTCAGCAGTACAAAACCAAAACGGGCTATAAATGGCTTT
TTAAAATGGGAGTTGGTATC

Product: YqaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MYTKSHLEDWIENLYRSISIITPEQIDFERIAELLGISVYFKPIPSCSFKYNDVYTIILDSRKTRFEQWDDFAHELCHLY
RHEGDKKTMPKFWSDYQERQANYFSYHFCIPTFMLHGMKIPQNHFFDAHLISKMFKVTEPFAKVRLNMYFNKIHLIVS

Sequences:

>Translated_158_residues
MYTKSHLEDWIENLYRSISIITPEQIDFERIAELLGISVYFKPIPSCSFKYNDVYTIILDSRKTRFEQWDDFAHELCHLY
RHEGDKKTMPKFWSDYQERQANYFSYHFCIPTFMLHGMKIPQNHFFDAHLISKMFKVTEPFAKVRLNMYFNKIHLIVS
>Mature_158_residues
MYTKSHLEDWIENLYRSISIITPEQIDFERIAELLGISVYFKPIPSCSFKYNDVYTIILDSRKTRFEQWDDFAHELCHLY
RHEGDKKTMPKFWSDYQERQANYFSYHFCIPTFMLHGMKIPQNHFFDAHLISKMFKVTEPFAKVRLNMYFNKIHLIVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010359 [H]

Pfam domain/function: PF06114 DUF955 [H]

EC number: NA

Molecular weight: Translated: 19193; Mature: 19193

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKSHLEDWIENLYRSISIITPEQIDFERIAELLGISVYFKPIPSCSFKYNDVYTIILD
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEECCCEEEEEEC
SRKTRFEQWDDFAHELCHLYRHEGDKKTMPKFWSDYQERQANYFSYHFCIPTFMLHGMKI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCC
PQNHFFDAHLISKMFKVTEPFAKVRLNMYFNKIHLIVS
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHEEEEEEEEC
>Mature Secondary Structure
MYTKSHLEDWIENLYRSISIITPEQIDFERIAELLGISVYFKPIPSCSFKYNDVYTIILD
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEECCCEEEEEEC
SRKTRFEQWDDFAHELCHLYRHEGDKKTMPKFWSDYQERQANYFSYHFCIPTFMLHGMKI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCC
PQNHFFDAHLISKMFKVTEPFAKVRLNMYFNKIHLIVS
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 3125151; 7489895 [H]