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The map label for this gene is int [H]

Identifier: 52785195

GI number: 52785195

Start: 1422600

End: 1423739

Strand: Reverse

Name: int [H]

Synonym: BLi01428

Alternate gene names: 52785195

Gene position: 1423739-1422600 (Counterclockwise)

Preceding gene: 52785196

Following gene: 52785191

Centisome position: 33.72

GC content: 37.11

Gene sequence:

>1140_bases
ATGGCTTCATTTCAGCAGTACAAAACCAAAACGGGCTATAAATGGCTTTTTAAAATGGGAGTTGGTATCGATCCCAAAAC
AGGCAATAGGAAAACAACAACACGCCGAGGCTTTAAGACCAAAAAAGAAGCTGTCGCAGCCGCTGCGGAATTCCAGAAGG
AAATCGATAATAATGCTCTTGCCCGAAATGACATTACTTTTGAGGATGTCTTTAAAGAATGGTGGGATGTTCATTCCAAA
ACGATAAAGCGCAGCACCAGATATAGAAAGCTATCGAATTTCAAAAAGCATATCCTGCCGCACTTCGGGAAATTAAAAAT
AAAAGACATCACAAGAGCATATTGTCAAAAGGTGATAAATCTGATAGCTCAGGATATTGATTCTGTTCAAAATGTAAAAA
TTCAAGCTAACCTTGTATTTAAATATGCTCTAAGGATGGAATACATCACAAAAAATCCAATGGAATTCGTTGTGATCCCC
AAAAAAGAAGAGAATTTTTTATCGCAGGAAGAAGAGAAACGGAACTTTTGGGAAAAGGACGAAATCAAAACCTTTCTCGA
AAAAGCGCATTCTCAACTCGCCCCACAAGATTATGTCATGTTTTATGTTCTTATTTTCACTGGTATGCGCAAAGGGGAAC
TTATTGCCTTGGAATGGAAAGACGTTGATTTAAAAGAGAAAACAATAAACATCAAACAAACAATGTTTTTTGAAAACGGT
AAAGAAGTCATCCAAACAACGAAAAAATATCATTCCAAGCGAATTATCACAATTGATGATCAAACAGCCCAAATACTTAA
AAAATGGCGCACACAACAAAAAGAAATGCTCTTGTCTAATGGAATCACCTCAGAAGCTAAATATGTCCTTATACGGGGCG
ATATGCGTCCTCTAAGGCTTGCATATCCAAACGACCTTTTAAACCGTATGATCACTAAAAATAAGCTTCACAGAATCACA
ATTCACGGTTTTAGGCATTCTCACGCATCAATCCTTTTTGAAGCAGGCGCATCCATAAAAGAAGTACAAGCCCGTTTAGG
TCACAAAGAAATTCAAACGACTATGAACATCTATACACATGTCACGAAAACCGCAAAAGCAAAAACGGCCGAAACATTTA
AAAAGTACATGGAATTATGA

Upstream 100 bases:

>100_bases
GTCACTGAACCATTTGCGAAAGTACGCCTTAACATGTACTTTAACAAAATTCATCTTATTGTTAGTTAAAAGAAACTTTA
AATAGGATTGGGGGGATAAT

Downstream 100 bases:

>100_bases
GAAATTCATTTAAACGTGGTCAAAATGTGGTCAAAAATCAATTTTAAACAAAAAACAAGCCCTCTTCCGAGCGACCGGAT
GAGGGCTTGAACATTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MASFQQYKTKTGYKWLFKMGVGIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALARNDITFEDVFKEWWDVHSK
TIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVINLIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIP
KKEENFLSQEEEKRNFWEKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENG
KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGDMRPLRLAYPNDLLNRMITKNKLHRIT
IHGFRHSHASILFEAGASIKEVQARLGHKEIQTTMNIYTHVTKTAKAKTAETFKKYMEL

Sequences:

>Translated_379_residues
MASFQQYKTKTGYKWLFKMGVGIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALARNDITFEDVFKEWWDVHSK
TIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVINLIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIP
KKEENFLSQEEEKRNFWEKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENG
KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGDMRPLRLAYPNDLLNRMITKNKLHRIT
IHGFRHSHASILFEAGASIKEVQARLGHKEIQTTMNIYTHVTKTAKAKTAETFKKYMEL
>Mature_378_residues
ASFQQYKTKTGYKWLFKMGVGIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALARNDITFEDVFKEWWDVHSKT
IKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVINLIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPK
KEENFLSQEEEKRNFWEKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENGK
EVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGDMRPLRLAYPNDLLNRMITKNKLHRITI
HGFRHSHASILFEAGASIKEVQARLGHKEIQTTMNIYTHVTKTAKAKTAETFKKYMEL

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44619; Mature: 44487

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFQQYKTKTGYKWLFKMGVGIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNAL
CCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC
ARNDITFEDVFKEWWDVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVIN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
LIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEKRNFWEKD
HHHHHHHHHHCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHHHHCCCCHH
EIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENG
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHCC
KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGDMRPLRL
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
AYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGHKEIQTTMNIYTH
ECCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
VTKTAKAKTAETFKKYMEL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASFQQYKTKTGYKWLFKMGVGIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNAL
CCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC
ARNDITFEDVFKEWWDVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVIN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
LIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEKRNFWEKD
HHHHHHHHHHCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHHHHCCCCHH
EIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFENG
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHCC
KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGDMRPLRL
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
AYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGHKEIQTTMNIYTH
ECCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
VTKTAKAKTAETFKKYMEL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]