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The map label for this gene is yjbK [H]

Identifier: 52785023

GI number: 52785023

Start: 1264812

End: 1265384

Strand: Reverse

Name: yjbK [H]

Synonym: BLi01252

Alternate gene names: 52785023

Gene position: 1265384-1264812 (Counterclockwise)

Preceding gene: 52785028

Following gene: 52785022

Centisome position: 29.97

GC content: 42.23

Gene sequence:

>573_bases
ATGAGCCAGGAACTTGAAATCGAATTTAAAAATATGCTGACAAAAAAAGAATTTGAGAAAATCAAATCATATTATCAATT
TTCCTCCGAGCAATTTGTTATACAAAAAAACCATTATTACGATACGCCTTCCTTCTCTTTAAAAGAAAAAGGAGCTGCCC
TAAGAATTCGCGAAAAGCAGCAGCGATTTGTCCTGACATTAAAAGAACCGGCGCCTGTCGGACTGATGGAAACCCACCAG
GAGCTGACCCGGAAGCCTGAAATCGAAACGTTCATGATTCCGCATGGGCCGGTATACGATCGTCTGAAGCGTCTCGGCAT
TGAAGCGGACGAGCTCATCCTTTTCGGAACGCTTGCGACAAGCCGTGCAGAAAAAAAATTGCCGCAGGGCTTAATTGTTT
TGGATCACAGCCGATACTTAATGGTAGAAGACTTTGAAATCGAATTCGAAGTGACGGATTATGAACGCGGAAAACGGGAT
TTCTCTGAACTGCTGAAATCGTTCGGCATCCCTGAGCGTGAAACCAAAAACAAAATCGTCCGATTTTATGAGCAAAAACT
TAAAGATCAATAA

Upstream 100 bases:

>100_bases
TCATTTTATCATATCAGCTTCAATATTGATAAACGTTCCTTCTCAAGAGATAATAAGGAAAATGCAATTTTACGAGCTGA
GAGGATGAAAAAATTAAAGA

Downstream 100 bases:

>100_bases
GGTGGGAAAACAATGAACGTCAACCATTTGGCCGCTCTCTTGGAACTTCAGGCGATACGGTCGTTTTATCCGGCTTCAGA
CAGCGGTTCCGAAGATGCGG

Product: YjbK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSQELEIEFKNMLTKKEFEKIKSYYQFSSEQFVIQKNHYYDTPSFSLKEKGAALRIREKQQRFVLTLKEPAPVGLMETHQ
ELTRKPEIETFMIPHGPVYDRLKRLGIEADELILFGTLATSRAEKKLPQGLIVLDHSRYLMVEDFEIEFEVTDYERGKRD
FSELLKSFGIPERETKNKIVRFYEQKLKDQ

Sequences:

>Translated_190_residues
MSQELEIEFKNMLTKKEFEKIKSYYQFSSEQFVIQKNHYYDTPSFSLKEKGAALRIREKQQRFVLTLKEPAPVGLMETHQ
ELTRKPEIETFMIPHGPVYDRLKRLGIEADELILFGTLATSRAEKKLPQGLIVLDHSRYLMVEDFEIEFEVTDYERGKRD
FSELLKSFGIPERETKNKIVRFYEQKLKDQ
>Mature_189_residues
SQELEIEFKNMLTKKEFEKIKSYYQFSSEQFVIQKNHYYDTPSFSLKEKGAALRIREKQQRFVLTLKEPAPVGLMETHQE
LTRKPEIETFMIPHGPVYDRLKRLGIEADELILFGTLATSRAEKKLPQGLIVLDHSRYLMVEDFEIEFEVTDYERGKRDF
SELLKSFGIPERETKNKIVRFYEQKLKDQ

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 22607; Mature: 22476

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQELEIEFKNMLTKKEFEKIKSYYQFSSEQFVIQKNHYYDTPSFSLKEKGAALRIREKQ
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHCCCCEEEEECCC
QRFVLTLKEPAPVGLMETHQELTRKPEIETFMIPHGPVYDRLKRLGIEADELILFGTLAT
CEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHEEEEEEHHH
SRAEKKLPQGLIVLDHSRYLMVEDFEIEFEVTDYERGKRDFSELLKSFGIPERETKNKIV
HHHHHCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
RFYEQKLKDQ
HHHHHHHCCC
>Mature Secondary Structure 
SQELEIEFKNMLTKKEFEKIKSYYQFSSEQFVIQKNHYYDTPSFSLKEKGAALRIREKQ
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHCCCCEEEEECCC
QRFVLTLKEPAPVGLMETHQELTRKPEIETFMIPHGPVYDRLKRLGIEADELILFGTLAT
CEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHEEEEEEHHH
SRAEKKLPQGLIVLDHSRYLMVEDFEIEFEVTDYERGKRDFSELLKSFGIPERETKNKIV
HHHHHCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
RFYEQKLKDQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]