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The map label for this gene is yjbJ [H]

Identifier: 52785022

GI number: 52785022

Start: 1264146

End: 1264799

Strand: Reverse

Name: yjbJ [H]

Synonym: BLi01251

Alternate gene names: 52785022

Gene position: 1264799-1264146 (Counterclockwise)

Preceding gene: 52785023

Following gene: 52785021

Centisome position: 29.95

GC content: 50.76

Gene sequence:

>654_bases
ATGAACGTCAACCATTTGGCCGCTCTCTTGGAACTTCAGGCGATACGGTCGTTTTATCCGGCTTCAGACAGCGGTTCCGA
AGATGCGGGTTTTGATTTCAGCTCGATTTTAAACCAATATTTAAGCAATGTCGGCGGCTTGGAGTCTTCACAGCCCGCGG
TTGCTCCGACTGTGTCGACAGCGTCTCAGCTTCAGGCCCCGCTGGCAGCTGAAAAGCCTGAGGCAATTGCGGCCGTCCCA
TCTGCCGCAGCGAAACCCGTCTCTTTCGGCGGCCAAAATCAGAACATTGACCAGATCATCAAAAACGCCGCAGAAAAATA
CGGGGTCGATGAGAAACTGATTCATGCCGTCGTCAAGCAGGAATCACGCTATCAAGAGAAAGCGGTCAGCCCGGCCGGCG
CCATGGGCCTGATGCAGCTCATGCCGTCCACGGCGAAGGCGCTCGGCGTGAATAACGCTTTTGACCCCGTTCAAAATATA
GAAGGCGGAACAAAATACTTAAAGCAGATGCTCGATAAATACAGCGGAAATGTGAAGCTCGCATTAGCGGCATACAATGC
CGGACCGGGAAATGTCCAAAAGTACGGAGGCATTCCCCCTTTTAAAGAAACGCAAAATTATGTAAAAAAAATCACCTCAA
ATTACTACGCTTAA

Upstream 100 bases:

>100_bases
TGAACTGCTGAAATCGTTCGGCATCCCTGAGCGTGAAACCAAAAACAAAATCGTCCGATTTTATGAGCAAAAACTTAAAG
ATCAATAAGGTGGGAAAACA

Downstream 100 bases:

>100_bases
GCCGGAAAGGACGCTTTCCGGCTTTTTTTCCTGCATTTACCTCCTCTTTCATCCTCCCGGTATTAAAAATACACATTTAA
GAAGCGAATATGATATGATA

Product: YjbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNVNHLAALLELQAIRSFYPASDSGSEDAGFDFSSILNQYLSNVGGLESSQPAVAPTVSTASQLQAPLAAEKPEAIAAVP
SAAAKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAVVKQESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNI
EGGTKYLKQMLDKYSGNVKLALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA

Sequences:

>Translated_217_residues
MNVNHLAALLELQAIRSFYPASDSGSEDAGFDFSSILNQYLSNVGGLESSQPAVAPTVSTASQLQAPLAAEKPEAIAAVP
SAAAKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAVVKQESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNI
EGGTKYLKQMLDKYSGNVKLALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA
>Mature_217_residues
MNVNHLAALLELQAIRSFYPASDSGSEDAGFDFSSILNQYLSNVGGLESSQPAVAPTVSTASQLQAPLAAEKPEAIAAVP
SAAAKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAVVKQESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNI
EGGTKYLKQMLDKYSGNVKLALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082441, Length=119, Percent_Identity=36.9747899159664, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI171474010, Length=97, Percent_Identity=38.1443298969072, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082191, Length=114, Percent_Identity=35.0877192982456, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 23001; Mature: 23001

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNHLAALLELQAIRSFYPASDSGSEDAGFDFSSILNQYLSNVGGLESSQPAVAPTVST
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ASQLQAPLAAEKPEAIAAVPSAAAKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAVVKQ
HHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
ESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNIEGGTKYLKQMLDKYSGNVKL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEE
ALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA
EEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVNHLAALLELQAIRSFYPASDSGSEDAGFDFSSILNQYLSNVGGLESSQPAVAPTVST
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ASQLQAPLAAEKPEAIAAVPSAAAKPVSFGGQNQNIDQIIKNAAEKYGVDEKLIHAVVKQ
HHHHHCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
ESRYQEKAVSPAGAMGLMQLMPSTAKALGVNNAFDPVQNIEGGTKYLKQMLDKYSGNVKL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEE
ALAAYNAGPGNVQKYGGIPPFKETQNYVKKITSNYYA
EEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]