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The map label for this gene is yhcN [H]

Identifier: 52784750

GI number: 52784750

Start: 976323

End: 976883

Strand: Direct

Name: yhcN [H]

Synonym: BLi00978

Alternate gene names: 52784750

Gene position: 976323-976883 (Clockwise)

Preceding gene: 52784747

Following gene: 52784751

Centisome position: 23.12

GC content: 44.03

Gene sequence:

>561_bases
ATGTTCAATATGAAAAAAGGCGCGATTGCTGCTTTGCTCCTTCCGCTGCTGTTCACAGCCGGATGCGGCATGGCAAACCA
AGGGGCAGATAACAACCGGCGCAATCAGGACAATGCGCTTCAAAATGTAACAAACAGAGATAACGACGCTACGAATGTCA
ATGACGGCAGAAATGTCAATGACCGAATGAATGTGACAGACAACCGCGATGCCAATCGTGAAGACAATAATATGGAAGTG
GCGGATAAAGCCGCAGATAAAGTGGCGGAACTTAAAGAAGTCAGTAGTGCAAACGTGATTACGACAAACCGCAACGCTTA
TGTCGCGGTCGTTTTGAAAGGCAATCCGAAAGGCAACTTGACGAATGAGCTGAAAGGGAAAATCTCGAAAAAGGTTAAAG
AAACAGACAATAACATCAACAATGTGTTCGTTTCGGCAAACCCTGACTTTGTTGACCGGATGAGAAACTATGGCGACAGA
ATTCAAAATGGCGAACCGATCGAAGGACTTTTTGAAGAATTTGGTGAAACGATCAACAGAATTTTTCCGAATCAAAGATA
A

Upstream 100 bases:

>100_bases
TGATCATAACAAAATAAGCGTATAAAAAATATATTTTAGACAAATAAATAACACGAAAAAGAAAAAAACTATACGTAAAT
CATTAAAGGAGGCAATTTTA

Downstream 100 bases:

>100_bases
TGAAAAGCCGCAATCCGCGGCTTTTTTTATTGGCTGCTTTCAGACAGGGCACTTCCTGAATCATCCCGCATAGAGTGTAG
TACAGAAAAGTATGATGCGG

Product: YhcN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFNMKKGAIAALLLPLLFTAGCGMANQGADNNRRNQDNALQNVTNRDNDATNVNDGRNVNDRMNVTDNRDANREDNNMEV
ADKAADKVAELKEVSSANVITTNRNAYVAVVLKGNPKGNLTNELKGKISKKVKETDNNINNVFVSANPDFVDRMRNYGDR
IQNGEPIEGLFEEFGETINRIFPNQR

Sequences:

>Translated_186_residues
MFNMKKGAIAALLLPLLFTAGCGMANQGADNNRRNQDNALQNVTNRDNDATNVNDGRNVNDRMNVTDNRDANREDNNMEV
ADKAADKVAELKEVSSANVITTNRNAYVAVVLKGNPKGNLTNELKGKISKKVKETDNNINNVFVSANPDFVDRMRNYGDR
IQNGEPIEGLFEEFGETINRIFPNQR
>Mature_186_residues
MFNMKKGAIAALLLPLLFTAGCGMANQGADNNRRNQDNALQNVTNRDNDATNVNDGRNVNDRMNVTDNRDANREDNNMEV
ADKAADKVAELKEVSSANVITTNRNAYVAVVLKGNPKGNLTNELKGKISKKVKETDNNINNVFVSANPDFVDRMRNYGDR
IQNGEPIEGLFEEFGETINRIFPNQR

Specific function: Plays a role, either directly or indirectly, in spore outgrowth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore inner membrane; Lipid-anchor (Probable). Note=Expressed in the forespore. Attached to the inner spore membrane by a lipid anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014247
- InterPro:   IPR019076 [H]

Pfam domain/function: PF09580 Spore_YhcN_YlaJ [H]

EC number: NA

Molecular weight: Translated: 20660; Mature: 20660

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNMKKGAIAALLLPLLFTAGCGMANQGADNNRRNQDNALQNVTNRDNDATNVNDGRNVN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DRMNVTDNRDANREDNNMEVADKAADKVAELKEVSSANVITTNRNAYVAVVLKGNPKGNL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCC
TNELKGKISKKVKETDNNINNVFVSANPDFVDRMRNYGDRIQNGEPIEGLFEEFGETINR
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IFPNQR
HCCCCC
>Mature Secondary Structure
MFNMKKGAIAALLLPLLFTAGCGMANQGADNNRRNQDNALQNVTNRDNDATNVNDGRNVN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DRMNVTDNRDANREDNNMEVADKAADKVAELKEVSSANVITTNRNAYVAVVLKGNPKGNL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCC
TNELKGKISKKVKETDNNINNVFVSANPDFVDRMRNYGDRIQNGEPIEGLFEEFGETINR
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IFPNQR
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377; 9611260 [H]