Click here to switch to the map view.

The map label for this gene is yhbJ [H]

Identifier: 52784736

GI number: 52784736

Start: 963083

End: 963715

Strand: Direct

Name: yhbJ [H]

Synonym: BLi00964

Alternate gene names: 52784736

Gene position: 963083-963715 (Clockwise)

Preceding gene: 52784735

Following gene: 52784737

Centisome position: 22.81

GC content: 44.39

Gene sequence:

>633_bases
ATGAGCAAAGGACGTTTAATTGCGACGAACATTATCGGACTCATCATCGTGCTTGCCATCTTAGCAGGAGGTGCGTATTT
CTATTATGACAGCATCAGCTATGTGAAAACCGATGAAGCGCACGTGGCAGGCGAGATGGCCGATATTACGGCGCCTGCAT
CAGGGAAGCTCGCAGATTGGGATTTGAAAGAAGGATCAAAAGTTTCGAAGGACGAAAAAACAGCGAAAATCAAAGGGGAA
CAAACGGTTGACGTGAAGTCGATCATGGACGGAACGATTGTCAAAAACGAAGCGAAGGAAGGCCAGATCGTACAAGCCGG
TCAAACGCTTGCGAAAACAATCGACATGGATCATCTGTACATTACTGCTAACATTGAAGAAAACGACCTGAAAGACATCG
AAAAAGGGGACAAAGTCGATATCGTCGTTGACGGTGATTCAGGCACTACATTTGAAGGGAATGTCGAAGAAATCGGCTAT
GCGACAAACTCAACATTTGACTTGCTTTCTCAAAGCAATTCAAGCGGAAACTACACGAAAGTAACGCAGAAAGTACCTGT
GAAAATTTCAATCAAAAACCCGTCTGACAAAGTGCTGCCGGGAATGAACGCATCCGTGAAAATTTCAAAATAA

Upstream 100 bases:

>100_bases
TCCCGCAAGCTGCTGAGCAGGAAATAGGAAAAGCAAAACCGAGGGAGCCGTTCAAACCGGCTTCACCCAAAATATAAGGA
TATGAAAGGAGAAATAAAAC

Downstream 100 bases:

>100_bases
CCGGGGGAAATAAAAACGAGCGAAAGGAGGATGTCATAAGTGGCTTCTCAGAAAAAAGGAAATATGTCACTGCTTATCAT
ATTAATGGCCGGCTTGTTTC

Product: YhbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDEAHVAGEMADITAPASGKLADWDLKEGSKVSKDEKTAKIKGE
QTVDVKSIMDGTIVKNEAKEGQIVQAGQTLAKTIDMDHLYITANIEENDLKDIEKGDKVDIVVDGDSGTTFEGNVEEIGY
ATNSTFDLLSQSNSSGNYTKVTQKVPVKISIKNPSDKVLPGMNASVKISK

Sequences:

>Translated_210_residues
MSKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDEAHVAGEMADITAPASGKLADWDLKEGSKVSKDEKTAKIKGE
QTVDVKSIMDGTIVKNEAKEGQIVQAGQTLAKTIDMDHLYITANIEENDLKDIEKGDKVDIVVDGDSGTTFEGNVEEIGY
ATNSTFDLLSQSNSSGNYTKVTQKVPVKISIKNPSDKVLPGMNASVKISK
>Mature_209_residues
SKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDEAHVAGEMADITAPASGKLADWDLKEGSKVSKDEKTAKIKGEQ
TVDVKSIMDGTIVKNEAKEGQIVQAGQTLAKTIDMDHLYITANIEENDLKDIEKGDKVDIVVDGDSGTTFEGNVEEIGYA
TNSTFDLLSQSNSSGNYTKVTQKVPVKISIKNPSDKVLPGMNASVKISK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790519, Length=120, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788711, Length=110, Percent_Identity=33.6363636363636, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 22523; Mature: 22391

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDEAHVAGEMADITAPASGKLADW
CCCCCEEHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCHHHCCCHHEECCCCCCCEECC
DLKEGSKVSKDEKTAKIKGEQTVDVKSIMDGTIVKNEAKEGQIVQAGQTLAKTIDMDHLY
CCCCCCCCCCCCCCEEECCCCEEEHHHHHCCEEEECCCCCCCEEHHHHHHHHHCCCCEEE
ITANIEENDLKDIEKGDKVDIVVDGDSGTTFEGNVEEIGYATNSTFDLLSQSNSSGNYTK
EEEECCCCHHHHHCCCCEEEEEEECCCCCEECCCHHHHCCCCCCHHHHHHCCCCCCCEEE
VTQKVPVKISIKNPSDKVLPGMNASVKISK
EEEECCEEEEECCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SKGRLIATNIIGLIIVLAILAGGAYFYYDSISYVKTDEAHVAGEMADITAPASGKLADW
CCCCEEHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCHHHCCCHHEECCCCCCCEECC
DLKEGSKVSKDEKTAKIKGEQTVDVKSIMDGTIVKNEAKEGQIVQAGQTLAKTIDMDHLY
CCCCCCCCCCCCCCEEECCCCEEEHHHHHCCEEEECCCCCCCEEHHHHHHHHHCCCCEEE
ITANIEENDLKDIEKGDKVDIVVDGDSGTTFEGNVEEIGYATNSTFDLLSQSNSSGNYTK
EEEECCCCHHHHHCCCCEEEEEEECCCCCEECCCHHHHCCCCCCHHHHHHCCCCCCCEEE
VTQKVPVKISIKNPSDKVLPGMNASVKISK
EEEECCEEEEECCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]