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The map label for this gene is yfjS [H]

Identifier: 52784626

GI number: 52784626

Start: 846229

End: 847023

Strand: Direct

Name: yfjS [H]

Synonym: BLi00827

Alternate gene names: 52784626

Gene position: 846229-847023 (Clockwise)

Preceding gene: 52784625

Following gene: 52784627

Centisome position: 20.04

GC content: 47.67

Gene sequence:

>795_bases
ATGATGAAACGAATCTGTGCCATATGCTGCGGATTCCTGCTGACGCTGGCGTTCAGCGGCAATGCTGAAGCGATTTCCAA
CAAGGCGATCCATTGGGGTTTTTCAAAAAGCAAAAACCATCAGCCGGCAGATGCGGGTCAAGAGCTGACCAACCTTTTAC
AGCAGTACGACGCCTTTTATTTGGGCAACACAAAGGAAAAAACGATCTATCTGACCTTTGATAACGGCTATGAAAACGGC
TACACCCCTCAGGTGCTCGATGTTCTGAAAAAACAAAACGTCAAAGCGGCCTTTTTTGTGACGGGCCATTTTGTCAAAGA
TCAGCCGGAGCTGATCAAGCGAATGGCCGAGGAGGGGCATATCATCGGGAATCATTCATATCACCATCCGGATCTGACGA
CGAAAACAAGCCGCGTCATTCAAGAGGAATTGGAATCGGTCGATGAGGAGGTTTACAAAATCACAGGCGAAAAAAACAAC
CTCTACCTGAGACCGCCTCGGGGCATTTTCAGCGAGCGGGTGCTCGAAGAAACGAAAAAGCTCGGCTATCAAACGGTATT
CTGGTCTGTTGCTTTTGTCGATTGGAAAATCAATGCCCAAAAAGGGTGGCGCTATGCGTACGACAATATGATGAAACAGG
CTCACCCCGGCGCCATCTATCTGCTTCACACCGTCTCGAGAGACAATGCCGAAGCGCTTGATCAGGCGATCACCGACTTG
AAAAAAGAAGGTTATACATTTAAAAGCCTCGATGACCTGATGTTTGAAAAATCTATGATGCTTGAGACCCTTTGA

Upstream 100 bases:

>100_bases
GCATTCTCTGCCGCGGTTTTTTTTGTTTTCCAAGTGTTGCTTGGTATGAAATGCTCAGCCCTTCTGCACAATAAGAAAAA
ATAAAACTGGGAGCGAGAAG

Downstream 100 bases:

>100_bases
AAGAACAATGCCCCGGCCGCTTTGCCGGGGTTTTGCTTTGGCTGAAAAAATTGATGCTTCAGGCTCTTTTTATTTCCCCT
AGTCAATTCTATAGAATAAA

Product: YfjS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMKRICAICCGFLLTLAFSGNAEAISNKAIHWGFSKSKNHQPADAGQELTNLLQQYDAFYLGNTKEKTIYLTFDNGYENG
YTPQVLDVLKKQNVKAAFFVTGHFVKDQPELIKRMAEEGHIIGNHSYHHPDLTTKTSRVIQEELESVDEEVYKITGEKNN
LYLRPPRGIFSERVLEETKKLGYQTVFWSVAFVDWKINAQKGWRYAYDNMMKQAHPGAIYLLHTVSRDNAEALDQAITDL
KKEGYTFKSLDDLMFEKSMMLETL

Sequences:

>Translated_264_residues
MMKRICAICCGFLLTLAFSGNAEAISNKAIHWGFSKSKNHQPADAGQELTNLLQQYDAFYLGNTKEKTIYLTFDNGYENG
YTPQVLDVLKKQNVKAAFFVTGHFVKDQPELIKRMAEEGHIIGNHSYHHPDLTTKTSRVIQEELESVDEEVYKITGEKNN
LYLRPPRGIFSERVLEETKKLGYQTVFWSVAFVDWKINAQKGWRYAYDNMMKQAHPGAIYLLHTVSRDNAEALDQAITDL
KKEGYTFKSLDDLMFEKSMMLETL
>Mature_264_residues
MMKRICAICCGFLLTLAFSGNAEAISNKAIHWGFSKSKNHQPADAGQELTNLLQQYDAFYLGNTKEKTIYLTFDNGYENG
YTPQVLDVLKKQNVKAAFFVTGHFVKDQPELIKRMAEEGHIIGNHSYHHPDLTTKTSRVIQEELESVDEEVYKITGEKNN
LYLRPPRGIFSERVLEETKKLGYQTVFWSVAFVDWKINAQKGWRYAYDNMMKQAHPGAIYLLHTVSRDNAEALDQAITDL
KKEGYTFKSLDDLMFEKSMMLETL

Specific function: Required for production of muramic delta-lactam residues in the spore cortex and for germination [H]

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=158, Percent_Identity=24.6835443037975, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6323339, Length=127, Percent_Identity=32.2834645669291, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30326; Mature: 30326

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRICAICCGFLLTLAFSGNAEAISNKAIHWGFSKSKNHQPADAGQELTNLLQQYDAFY
CHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHEE
LGNTKEKTIYLTFDNGYENGYTPQVLDVLKKQNVKAAFFVTGHFVKDQPELIKRMAEEGH
ECCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCC
IIGNHSYHHPDLTTKTSRVIQEELESVDEEVYKITGEKNNLYLRPPRGIFSERVLEETKK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
LGYQTVFWSVAFVDWKINAQKGWRYAYDNMMKQAHPGAIYLLHTVSRDNAEALDQAITDL
CCHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
KKEGYTFKSLDDLMFEKSMMLETL
HHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKRICAICCGFLLTLAFSGNAEAISNKAIHWGFSKSKNHQPADAGQELTNLLQQYDAFY
CHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHEE
LGNTKEKTIYLTFDNGYENGYTPQVLDVLKKQNVKAAFFVTGHFVKDQPELIKRMAEEGH
ECCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCC
IIGNHSYHHPDLTTKTSRVIQEELESVDEEVYKITGEKNNLYLRPPRGIFSERVLEETKK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
LGYQTVFWSVAFVDWKINAQKGWRYAYDNMMKQAHPGAIYLLHTVSRDNAEALDQAITDL
CCHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
KKEGYTFKSLDDLMFEKSMMLETL
HHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 12374835 [H]