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The map label for this gene is yfmM [H]

Identifier: 52784574

GI number: 52784574

Start: 786474

End: 788030

Strand: Reverse

Name: yfmM [H]

Synonym: BLi00775

Alternate gene names: 52784574

Gene position: 788030-786474 (Counterclockwise)

Preceding gene: 52784576

Following gene: 52784571

Centisome position: 18.66

GC content: 47.91

Gene sequence:

>1557_bases
ATGAGTTTACTTACAGTTACAAAGCTGAGCCACGGTTTTGGCGACCGGGCGATCTTTCATGATATATCCTTTCGCTTGCT
GAAAGGCGAACATGTCGGTCTCATCGGAGCAAACGGCGAAGGAAAATCGACCTTCATGAATATCATTACGGGCAAACTTG
AGCCTGACGAAGGAAAAGTAGAATGGTCAAAAAACGTCCGGGTCGGCTATCTTGACCAGCATACATCGCTTGAGCGCGGA
CAAACGATCCGCGATGTGCTGAGAAACGCTTTCCATTATTTATTTGCGATGGAAGAAGAAGTGAATGCCATCTACACAAA
AATGGGCGAGGCCGACCCCGACGAGCTTGAAAAGCTTCTCGAAGAAGTCGGAACGATTCAGGACGCCCTGACCAACAACG
ACTTTTACGCGATTGACGCAAAAGTTGAAGAAATCGCCCGCGGCCTCGGGCTCAACGATCTCGGACTTGACAGGGATGTC
GCGGAATTGAGCGGCGGTCAGCGGACAAAGGTGCTGCTCGCCAAACTGCTCTTGGAAAAGCCCGACATCCTGCTGCTCGA
TGAGCCGACAAACTATCTGGACGAACAGCATATCGAATGGCTGAAACGCTATTTGCAGGAGTACGAGAACGCCTTTATTT
TGATTTCTCACGACATTCCGTTTTTAAACAGCGTCATCAATCTGATCTACCATGTGGAAAACCAGGAGCTGACCCGCTAT
GTCGGCGACTACAACCAATTCCGCGAAGTATATGAAGTGAAAAAACAACAGCTTGAAGCCGCCTACAAAAAACAGCAGCA
GGAGATTTCAGAGCTGAAAGACTTCGTCGCCCGCAACAAAGCGCGCGTCAGCACAAGAAATATGGCAATGTCACGGCAAA
AAAAGCTCGATAAAATGGATATGATCGAGCTCCCTTCGGAAAAACCGAAGCCTGAATTTCACTTTAAACAAGCAAGAACA
TCCGGAAAGCTGATTTTTGAAACGAAGGAGCTCGTCATCGGCTATGATGAGCCGTTGTCCCGCCCGCTGAACTTGAGAAT
GGAGCGCGGCCAAAAAATCGCTCTGTACGGAGCCAACGGCATTGGAAAAACGACATTGCTGAAAAGCCTCCTGGGGGAAA
TTTCACCGCTGTCGGGAGAAGTCGAACGCGGCGAACACCTTCATATCGGCTATTTCGAGCAGGAAGTCAAAGAGACCAAC
AACAACACATGCATAGAAGAAGTGTGGAACGACTTCCCGTCCTTTACACAGTACGAAATCCGCGCGGCCCTGGCGAAGTG
CGGGCTGACGACAAAGCATATCGAAAGCAGGGTTTCCGTATTAAGCGGAGGGGAAAAAGCAAAAGTCAGACTATGCAAGC
TTATCAATTCAGAAACGAATCTGCTTGTACTCGATGAACCGACAAACCACCTTGATGTTGAAGCAAAAGAAGAATTAAAA
AGAGCTTTGAAAGAATACAAAGGCTCTGTCCTGCTCATCTCTCACGAACCTGAATTCTATATGGACATAGCGACAGAAAC
ATGGAATTGCGAGTCATGGACAACGAAAGTTTTATAA

Upstream 100 bases:

>100_bases
ATCTCAAAACAAAAGCGGCTTCGCAATTTTTCTTTTATTGTTCCCTCCGAGTTCGATATAATCTTATAGAATACAGATTA
TATTTCTTGAGGTGCAAAAC

Downstream 100 bases:

>100_bases
ACAAAAAAGCTTGTTTCCTTTTAGGGAAACAAGCTTTTTTCATTAATGACCGGCTTTGATGCCCGCCAAATAACGGCGGC
CTCCAGCCAAGACGGCGATG

Product: YfmM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MSLLTVTKLSHGFGDRAIFHDISFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTSLERG
QTIRDVLRNAFHYLFAMEEEVNAIYTKMGEADPDELEKLLEEVGTIQDALTNNDFYAIDAKVEEIARGLGLNDLGLDRDV
AELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
VGDYNQFREVYEVKKQQLEAAYKKQQQEISELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELPSEKPKPEFHFKQART
SGKLIFETKELVIGYDEPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEISPLSGEVERGEHLHIGYFEQEVKETN
NNTCIEEVWNDFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVEAKEELK
RALKEYKGSVLLISHEPEFYMDIATETWNCESWTTKVL

Sequences:

>Translated_518_residues
MSLLTVTKLSHGFGDRAIFHDISFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTSLERG
QTIRDVLRNAFHYLFAMEEEVNAIYTKMGEADPDELEKLLEEVGTIQDALTNNDFYAIDAKVEEIARGLGLNDLGLDRDV
AELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
VGDYNQFREVYEVKKQQLEAAYKKQQQEISELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELPSEKPKPEFHFKQART
SGKLIFETKELVIGYDEPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEISPLSGEVERGEHLHIGYFEQEVKETN
NNTCIEEVWNDFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVEAKEELK
RALKEYKGSVLLISHEPEFYMDIATETWNCESWTTKVL
>Mature_517_residues
SLLTVTKLSHGFGDRAIFHDISFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTSLERGQ
TIRDVLRNAFHYLFAMEEEVNAIYTKMGEADPDELEKLLEEVGTIQDALTNNDFYAIDAKVEEIARGLGLNDLGLDRDVA
ELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYV
GDYNQFREVYEVKKQQLEAAYKKQQQEISELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELPSEKPKPEFHFKQARTS
GKLIFETKELVIGYDEPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEISPLSGEVERGEHLHIGYFEQEVKETNN
NTCIEEVWNDFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVEAKEELKR
ALKEYKGSVLLISHEPEFYMDIATETWNCESWTTKVL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=507, Percent_Identity=29.585798816568, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=30.1318267419962, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI69354671, Length=522, Percent_Identity=30.2681992337165, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI10947137, Length=523, Percent_Identity=30.5927342256214, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI27881506, Length=523, Percent_Identity=30.5927342256214, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI90421313, Length=153, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787041, Length=510, Percent_Identity=35.4901960784314, Blast_Score=292, Evalue=4e-80,
Organism=Escherichia coli, GI1789751, Length=498, Percent_Identity=29.718875502008, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI2367384, Length=498, Percent_Identity=30.9236947791165, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1787182, Length=531, Percent_Identity=30.6967984934087, Blast_Score=217, Evalue=2e-57,
Organism=Escherichia coli, GI1788165, Length=291, Percent_Identity=23.7113402061856, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788506, Length=255, Percent_Identity=29.8039215686275, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786975, Length=252, Percent_Identity=23.4126984126984, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789962, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787758, Length=169, Percent_Identity=27.2189349112426, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=514, Percent_Identity=27.431906614786, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17555318, Length=519, Percent_Identity=28.9017341040462, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17553372, Length=511, Percent_Identity=31.3111545988258, Blast_Score=206, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6321121, Length=525, Percent_Identity=31.6190476190476, Blast_Score=238, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6320874, Length=527, Percent_Identity=30.9297912713473, Blast_Score=220, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=27.363184079602, Blast_Score=131, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=398, Percent_Identity=26.8844221105528, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=400, Percent_Identity=27, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24666836, Length=516, Percent_Identity=30.6201550387597, Blast_Score=242, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24641342, Length=523, Percent_Identity=30.5927342256214, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=28.4894837476099, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=28.4894837476099, Blast_Score=205, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59289; Mature: 59158

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLTVTKLSHGFGDRAIFHDISFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKV
CCCEEEEHHHCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
EWSKNVRVGYLDQHTSLERGQTIRDVLRNAFHYLFAMEEEVNAIYTKMGEADPDELEKLL
EECCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EEVGTIQDALTNNDFYAIDAKVEEIARGLGLNDLGLDRDVAELSGGQRTKVLLAKLLLEK
HHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCC
PDILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHH
VGDYNQFREVYEVKKQQLEAAYKKQQQEISELKDFVARNKARVSTRNMAMSRQKKLDKMD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
MIELPSEKPKPEFHFKQARTSGKLIFETKELVIGYDEPLSRPLNLRMERGQKIALYGANG
HHCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCC
IGKTTLLKSLLGEISPLSGEVERGEHLHIGYFEQEVKETNNNTCIEEVWNDFPSFTQYEI
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH
RAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVEAKEELK
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
RALKEYKGSVLLISHEPEFYMDIATETWNCESWTTKVL
HHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SLLTVTKLSHGFGDRAIFHDISFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKV
CCEEEEHHHCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
EWSKNVRVGYLDQHTSLERGQTIRDVLRNAFHYLFAMEEEVNAIYTKMGEADPDELEKLL
EECCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EEVGTIQDALTNNDFYAIDAKVEEIARGLGLNDLGLDRDVAELSGGQRTKVLLAKLLLEK
HHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCC
PDILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHH
VGDYNQFREVYEVKKQQLEAAYKKQQQEISELKDFVARNKARVSTRNMAMSRQKKLDKMD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
MIELPSEKPKPEFHFKQARTSGKLIFETKELVIGYDEPLSRPLNLRMERGQKIALYGANG
HHCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCC
IGKTTLLKSLLGEISPLSGEVERGEHLHIGYFEQEVKETNNNTCIEEVWNDFPSFTQYEI
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH
RAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVEAKEELK
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
RALKEYKGSVLLISHEPEFYMDIATETWNCESWTTKVL
HHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]