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The map label for this gene is yfmJ [H]

Identifier: 52784576

GI number: 52784576

Start: 789342

End: 790364

Strand: Reverse

Name: yfmJ [H]

Synonym: BLi00777

Alternate gene names: 52784576

Gene position: 790364-789342 (Counterclockwise)

Preceding gene: 52784577

Following gene: 52784574

Centisome position: 18.72

GC content: 48.88

Gene sequence:

>1023_bases
ATGCCGCAAAAGCAAATTGAACTTGCAAGACGTCCGCAGGGCATACCTGTTATGGACGATTTCCGCATAAAAGAAACGGA
AATTCCGGAAGCAAAAAACGGTGAAGCGCTTGTAAAAACGCTTTATGTCTCAGTGGACCCTTATATGAGGGGAAGAATGC
AGGATACGAAATCCTATGTCGAGCCATTTCCGCTTGATGAAGTGATCACCGGGGGCGTGATCGGCGAAGTGATATCTGCA
AAAGGAGACAAGCTCAAAAAAGGGGATATTGTTTTGGGCCGCTTGGGCTGGCAGGAGTATTCAGCGGTTCGCGAAGACAA
TCTCCAGAAAATCGATCCGTCCCTCGCACCTGTTACCGCTTTTCTTGGAATTCTCGGCATGACCGGTTTGACGGCCTATT
TCGGACTTCTGGACATCGGACAGCCAAAAGCCGGTGAAACGGTTGTTGTCTCCGGGGCCGCCGGAGCAGTCGGCTCCGCC
GTCGGACAAATCGCCAAAATCAAAGGGGCAAGAGTCGTCGGAATTGCGGGCTCTGATGAAAAAACGGCATATTTAAAAGA
AAAGCTCGGTTTTGATGAAGCAATCAATTATAAAACAACGGAAAATATGGCTTCAGCGCTTGAACAAGCTTGCCCGGACG
GTGTCGATGTTTACTTTGACAACGTCGGTGGCGCGATTTCAGATGCCGTCTTCACCCTGATCAATAAGTTTGCACGAATT
CCGGTCTGCGGGGCGATTTCTTCTTATAACGTCAAAAGCGCAGAAGAAGATATGGGACCGCGCGTACAAACGGCCTTGAT
TAAATCAAGCGCCCTGATGAAGGGATTTGTCGTAAACGATTACAGGGACCGCTTTCCTGAAGGAATCAAACAGCTCGCCG
AATGGGTGAAAAGCGGACAGCTTCAATATGAGGAAACGATAACAGAAGGTTTCGAGCGGATACCTGAGGCATTTTTAGGC
TTGTTTGAAGGAAAAAACCTCGGCAAGCAGCTGATCAAAGTCGCCGATTCCGACAATGCCTGA

Upstream 100 bases:

>100_bases
TGCCCGATTCTGTACTGAAGAAAACATTTCGTGCAATCCGCTGATCTTTTGCTAAACCTCTTTTTTACGTGGTAAGTTAT
AAGTAAAAGGAGGAATCATT

Downstream 100 bases:

>100_bases
GCATTCATATAAAAAGAGGCCTGCCGGCGGCAGGCCTCTTTTCTTATCTTTCAATAATCCGTCCTCTTTCATACACGATC
CGCTGAAGCGGAATTTCAAG

Product: YfmJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPQKQIELARRPQGIPVMDDFRIKETEIPEAKNGEALVKTLYVSVDPYMRGRMQDTKSYVEPFPLDEVITGGVIGEVISA
KGDKLKKGDIVLGRLGWQEYSAVREDNLQKIDPSLAPVTAFLGILGMTGLTAYFGLLDIGQPKAGETVVVSGAAGAVGSA
VGQIAKIKGARVVGIAGSDEKTAYLKEKLGFDEAINYKTTENMASALEQACPDGVDVYFDNVGGAISDAVFTLINKFARI
PVCGAISSYNVKSAEEDMGPRVQTALIKSSALMKGFVVNDYRDRFPEGIKQLAEWVKSGQLQYEETITEGFERIPEAFLG
LFEGKNLGKQLIKVADSDNA

Sequences:

>Translated_340_residues
MPQKQIELARRPQGIPVMDDFRIKETEIPEAKNGEALVKTLYVSVDPYMRGRMQDTKSYVEPFPLDEVITGGVIGEVISA
KGDKLKKGDIVLGRLGWQEYSAVREDNLQKIDPSLAPVTAFLGILGMTGLTAYFGLLDIGQPKAGETVVVSGAAGAVGSA
VGQIAKIKGARVVGIAGSDEKTAYLKEKLGFDEAINYKTTENMASALEQACPDGVDVYFDNVGGAISDAVFTLINKFARI
PVCGAISSYNVKSAEEDMGPRVQTALIKSSALMKGFVVNDYRDRFPEGIKQLAEWVKSGQLQYEETITEGFERIPEAFLG
LFEGKNLGKQLIKVADSDNA
>Mature_339_residues
PQKQIELARRPQGIPVMDDFRIKETEIPEAKNGEALVKTLYVSVDPYMRGRMQDTKSYVEPFPLDEVITGGVIGEVISAK
GDKLKKGDIVLGRLGWQEYSAVREDNLQKIDPSLAPVTAFLGILGMTGLTAYFGLLDIGQPKAGETVVVSGAAGAVGSAV
GQIAKIKGARVVGIAGSDEKTAYLKEKLGFDEAINYKTTENMASALEQACPDGVDVYFDNVGGAISDAVFTLINKFARIP
VCGAISSYNVKSAEEDMGPRVQTALIKSSALMKGFVVNDYRDRFPEGIKQLAEWVKSGQLQYEETITEGFERIPEAFLGL
FEGKNLGKQLIKVADSDNA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=334, Percent_Identity=44.6107784431138, Blast_Score=268, Evalue=7e-72,
Organism=Homo sapiens, GI226059133, Length=334, Percent_Identity=44.6107784431138, Blast_Score=268, Evalue=7e-72,
Organism=Homo sapiens, GI226246682, Length=348, Percent_Identity=42.2413793103448, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI226246680, Length=348, Percent_Identity=42.2413793103448, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI22748929, Length=348, Percent_Identity=42.2413793103448, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI226056130, Length=306, Percent_Identity=43.1372549019608, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI28557745, Length=335, Percent_Identity=31.3432835820896, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI194239674, Length=315, Percent_Identity=23.4920634920635, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI13236495, Length=315, Percent_Identity=23.4920634920635, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI226510941, Length=334, Percent_Identity=44.6107784431138, Blast_Score=302, Evalue=2e-83,
Organism=Caenorhabditis elegans, GI133901712, Length=356, Percent_Identity=36.2359550561798, Blast_Score=205, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI133901710, Length=356, Percent_Identity=36.2359550561798, Blast_Score=205, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6323504, Length=335, Percent_Identity=30.7462686567164, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36741; Mature: 36610

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQKQIELARRPQGIPVMDDFRIKETEIPEAKNGEALVKTLYVSVDPYMRGRMQDTKSYV
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHCCCHHHHCCHHHHHHHC
EPFPLDEVITGGVIGEVISAKGDKLKKGDIVLGRLGWQEYSAVREDNLQKIDPSLAPVTA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHCCCCHHHHHH
FLGILGMTGLTAYFGLLDIGQPKAGETVVVSGAAGAVGSAVGQIAKIKGARVVGIAGSDE
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC
KTAYLKEKLGFDEAINYKTTENMASALEQACPDGVDVYFDNVGGAISDAVFTLINKFARI
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
PVCGAISSYNVKSAEEDMGPRVQTALIKSSALMKGFVVNDYRDRFPEGIKQLAEWVKSGQ
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
LQYEETITEGFERIPEAFLGLFEGKNLGKQLIKVADSDNA
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PQKQIELARRPQGIPVMDDFRIKETEIPEAKNGEALVKTLYVSVDPYMRGRMQDTKSYV
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHCCCHHHHCCHHHHHHHC
EPFPLDEVITGGVIGEVISAKGDKLKKGDIVLGRLGWQEYSAVREDNLQKIDPSLAPVTA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHCCCCHHHHHH
FLGILGMTGLTAYFGLLDIGQPKAGETVVVSGAAGAVGSAVGQIAKIKGARVVGIAGSDE
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC
KTAYLKEKLGFDEAINYKTTENMASALEQACPDGVDVYFDNVGGAISDAVFTLINKFARI
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
PVCGAISSYNVKSAEEDMGPRVQTALIKSSALMKGFVVNDYRDRFPEGIKQLAEWVKSGQ
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
LQYEETITEGFERIPEAFLGLFEGKNLGKQLIKVADSDNA
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]