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The map label for this gene is yrhO [H]

Identifier: 52784448

GI number: 52784448

Start: 647936

End: 648763

Strand: Reverse

Name: yrhO [H]

Synonym: BLi00645

Alternate gene names: 52784448

Gene position: 648763-647936 (Counterclockwise)

Preceding gene: 52784453

Following gene: 52784442

Centisome position: 15.36

GC content: 46.62

Gene sequence:

>828_bases
ATGAAGGAAAACATATTAGACGTACTGAAAAACCTGAATTTCACCGAGTATGAATCGAAAGCATACTTGGCGCTCTTGGA
AGAATCGCCGCTGACAGGCTATGCGGTGGCAAAAAAATCGGGTGTTCCCCGGTCGAAAATATACGAAGTGCTGGAGAGCC
TTGTAATCCGCGGCGATATATTTGTCAGCTACGGCAACACACCGCAGTACATTCCCGTTCCCGCCAAGGACCTGATTAAA
AACCGGCGGATGAAAGCGGAAGAGACTTTTGAACAGGCAGAAAAATATTTCGAGAAGTTTGAGCGCACTGCAAATGACCG
GGAAAATATTTGGAACATCACCGGGCGAAGCGAGATTCTCGATAAAGTAAAGGCGTGCATATCATCGGCCGGAAAAAGGA
TTCTCCTGGAAATTTGGAAAGAGGATTTTCCTGAATTGGAGCCTGAGCTCAAGCGGGCCGCAAAAAAAGGCGTCATTGTG
ACCATTATTGCATACGGCGACATTGAAGCGGATTTCGCCAATGTCTATCTACATGACAACAGCAGGCAAATTACAGAAGA
GTATGACGGACGCTGGCTCGTATTCAGCGTCGACGATTCAGAAGTTGTGGCCGGCATTGTCTCGCATGGGAAAGACAGCC
GCGCAGCCTGGACGATGCATGTAGGCTTGGTGATGCCGATTACCGAAGTGATGATTCATGATTTGTACCTGATGGAAATC
ATGGAGAAGCACAGAGAGGTATTGGAGGAAAGTTTCGGCGAAAACCTGATCCATTTGCGCCGCAAATTTTCGATACATCC
GGATTTTAAAAAGCATTATATGAAATAA

Upstream 100 bases:

>100_bases
ACCACTTATAAAAAGTGTATCAGCGGACTTGAAATAAATCAATACATCCAGCAAAATATGAGTGACAAAGGTAGCGACTC
TTGTTGAAGCTGGAGGGCTT

Downstream 100 bases:

>100_bases
AAAGGCCTGCGCTAAAGCGCGGGCCTTTCATGTTATGACCTTTCGGATGCCTCCCAGCGGGATACTTCTTCCCTGACGAG
CGGCGCCGTTTTTGTTCCAA

Product: YrhO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKENILDVLKNLNFTEYESKAYLALLEESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDIFVSYGNTPQYIPVPAKDLIK
NRRMKAEETFEQAEKYFEKFERTANDRENIWNITGRSEILDKVKACISSAGKRILLEIWKEDFPELEPELKRAAKKGVIV
TIIAYGDIEADFANVYLHDNSRQITEEYDGRWLVFSVDDSEVVAGIVSHGKDSRAAWTMHVGLVMPITEVMIHDLYLMEI
MEKHREVLEESFGENLIHLRRKFSIHPDFKKHYMK

Sequences:

>Translated_275_residues
MKENILDVLKNLNFTEYESKAYLALLEESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDIFVSYGNTPQYIPVPAKDLIK
NRRMKAEETFEQAEKYFEKFERTANDRENIWNITGRSEILDKVKACISSAGKRILLEIWKEDFPELEPELKRAAKKGVIV
TIIAYGDIEADFANVYLHDNSRQITEEYDGRWLVFSVDDSEVVAGIVSHGKDSRAAWTMHVGLVMPITEVMIHDLYLMEI
MEKHREVLEESFGENLIHLRRKFSIHPDFKKHYMK
>Mature_275_residues
MKENILDVLKNLNFTEYESKAYLALLEESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDIFVSYGNTPQYIPVPAKDLIK
NRRMKAEETFEQAEKYFEKFERTANDRENIWNITGRSEILDKVKACISSAGKRILLEIWKEDFPELEPELKRAAKKGVIV
TIIAYGDIEADFANVYLHDNSRQITEEYDGRWLVFSVDDSEVVAGIVSHGKDSRAAWTMHVGLVMPITEVMIHDLYLMEI
MEKHREVLEESFGENLIHLRRKFSIHPDFKKHYMK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 31865; Mature: 31865

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENILDVLKNLNFTEYESKAYLALLEESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDI
CCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHCEE
FVSYGNTPQYIPVPAKDLIKNRRMKAEETFEQAEKYFEKFERTANDRENIWNITGRSEIL
EEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHH
DKVKACISSAGKRILLEIWKEDFPELEPELKRAAKKGVIVTIIAYGDIEADFANVYLHDN
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCCEEEEEEECC
SRQITEEYDGRWLVFSVDDSEVVAGIVSHGKDSRAAWTMHVGLVMPITEVMIHDLYLMEI
CCHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
MEKHREVLEESFGENLIHLRRKFSIHPDFKKHYMK
HHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MKENILDVLKNLNFTEYESKAYLALLEESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDI
CCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHCEE
FVSYGNTPQYIPVPAKDLIKNRRMKAEETFEQAEKYFEKFERTANDRENIWNITGRSEIL
EEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHH
DKVKACISSAGKRILLEIWKEDFPELEPELKRAAKKGVIVTIIAYGDIEADFANVYLHDN
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCCEEEEEEECC
SRQITEEYDGRWLVFSVDDSEVVAGIVSHGKDSRAAWTMHVGLVMPITEVMIHDLYLMEI
CCHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
MEKHREVLEESFGENLIHLRRKFSIHPDFKKHYMK
HHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]