Click here to switch to the map view.

The map label for this gene is ycgQ [H]

Identifier: 52784199

GI number: 52784199

Start: 355549

End: 356394

Strand: Reverse

Name: ycgQ [H]

Synonym: BLi00377

Alternate gene names: 52784199

Gene position: 356394-355549 (Counterclockwise)

Preceding gene: 52784200

Following gene: 52784191

Centisome position: 8.44

GC content: 41.84

Gene sequence:

>846_bases
ATGTTTCGCACATTCATTTTAATGTTGTTTACGTTTTTCTTTTTTCATCTTCATGCATCCGGCAATCTGACAAAATATAT
TAATATGAAATACGCTTACCTTTCATACATCGCTATTATTCTTCTGGCCATTTTGACAGCTGTGCAATTCTACATTTATA
TGAAAAGCTCGGATGAAAAAGGATGTAACCATGAATGCGGATGCGGCCATGACCACGATCATGAAAAAGATAAGCCTTTT
CTGCAAAGAATGTTCATTTATTTCGTGTTCTTCTTCCCTTTATGCACCGGACTTTTTCTGCCGGCAGCGACGCTTGATTC
CAATATCGTCAAGTCGAAGGGCTTCTCGTTCAAAGCGATCGAACAGCCGGAGCATTATGCCCAAACCCAGTACCTGCGCC
CCGACACAAGCATCTACTACGGCCAGGATGGGTATGATGAATTGATGAATAAAGCGCTGAAAAAGTATAAAGAAAAACAG
CATATTACATTAAAAGATGATGATTTTTTGAAGGGCATGGAAACGATCTATCATTATCCGGGAGAATTCCTTGACCGAAC
GCTCGAATTCGACGGCTTTGCTTTTAAAGGGGAAGCGATCAGTGACAAACAGCTGTTTGTCCTCCGCTTCGGCATCATTC
ATTGCATCGCCGACTCCGGCGTCTATGGCATGCTGGTCGAGTTCCCTGAAAATATGGATATTAAAGACGACCAGTGGCTT
CATGTAAAAGGAACGCTGTCTTCCGAATACTATCAGCCTTTCAAATCTACAATTCCCGTGCTGAAAGTGAAGGATTGGTC
TGCAATAAAAGAGCCGAAAGATCCTTACGTTTATCGGACATATTAA

Upstream 100 bases:

>100_bases
ATGATGCTCGGCATCTTCAAAAAGCGCTTTGTGTTTGTCTTAATCCCCTACATCGCCGTTATTGTCTTAGCCGGATCACT
GTTGGTAAAGGGGTGAGAAC

Downstream 100 bases:

>100_bases
AAGCCGGCACTTCATGTACCGGCTTTTCTTTTTCTGTTTACGATTTGTAGCCTGCTTTCTTCATCAGCATTAAATCGATA
AACAACTGACATCTTGTATT

Product: YcgQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQFYIYMKSSDEKGCNHECGCGHDHDHEKDKPF
LQRMFIYFVFFFPLCTGLFLPAATLDSNIVKSKGFSFKAIEQPEHYAQTQYLRPDTSIYYGQDGYDELMNKALKKYKEKQ
HITLKDDDFLKGMETIYHYPGEFLDRTLEFDGFAFKGEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWL
HVKGTLSSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY

Sequences:

>Translated_281_residues
MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQFYIYMKSSDEKGCNHECGCGHDHDHEKDKPF
LQRMFIYFVFFFPLCTGLFLPAATLDSNIVKSKGFSFKAIEQPEHYAQTQYLRPDTSIYYGQDGYDELMNKALKKYKEKQ
HITLKDDDFLKGMETIYHYPGEFLDRTLEFDGFAFKGEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWL
HVKGTLSSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY
>Mature_281_residues
MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQFYIYMKSSDEKGCNHECGCGHDHDHEKDKPF
LQRMFIYFVFFFPLCTGLFLPAATLDSNIVKSKGFSFKAIEQPEHYAQTQYLRPDTSIYYGQDGYDELMNKALKKYKEKQ
HITLKDDDFLKGMETIYHYPGEFLDRTLEFDGFAFKGEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWL
HVKGTLSSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0703 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015402 [H]

Pfam domain/function: PF09323 DUF1980 [H]

EC number: NA

Molecular weight: Translated: 33002; Mature: 33002

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQFYIYMKSSDEK
CHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
GCNHECGCGHDHDHEKDKPFLQRMFIYFVFFFPLCTGLFLPAATLDSNIVKSKGFSFKAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEC
EQPEHYAQTQYLRPDTSIYYGQDGYDELMNKALKKYKEKQHITLKDDDFLKGMETIYHYP
CCCHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCC
GEFLDRTLEFDGFAFKGEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWL
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE
HVKGTLSSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY
EEEECCCHHHHHHHHHCCCEEEECCCHHHCCCCCCEEEECC
>Mature Secondary Structure
MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQFYIYMKSSDEK
CHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
GCNHECGCGHDHDHEKDKPFLQRMFIYFVFFFPLCTGLFLPAATLDSNIVKSKGFSFKAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEC
EQPEHYAQTQYLRPDTSIYYGQDGYDELMNKALKKYKEKQHITLKDDDFLKGMETIYHYP
CCCHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCC
GEFLDRTLEFDGFAFKGEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWL
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE
HVKGTLSSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY
EEEECCCHHHHHHHHHCCCEEEECCCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]