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The map label for this gene is ycgR [H]

Identifier: 52784200

GI number: 52784200

Start: 356399

End: 357286

Strand: Reverse

Name: ycgR [H]

Synonym: BLi00378

Alternate gene names: 52784200

Gene position: 357286-356399 (Counterclockwise)

Preceding gene: 52784204

Following gene: 52784199

Centisome position: 8.46

GC content: 48.65

Gene sequence:

>888_bases
GTGGCTTCACAATCCTTTCTGCAGCTGAACTCAATATTTATCAGTATATTAATAGAAGCGATTCCGTTCGTCTTGATCGG
GGTTTTTATATCAGGTTTGATTCAAATGTTTGTGACGGAGGAGATGATGGCGAAAATCATTCCGAAAAACCGATTTCTCG
CCGTTTTGTCAGGAACATTTGCCGGGGTATTGTTTCCGGCTTGCGAGTGCGGCATCGTTCCGATTGCCCGCAGGCTGCTT
TTAAAGGGAGTGCCGCTTCATGCGGCGGTCGCCTTCATGCTGACGGCCCCGATCATCAATCCGATTGTATTATTCTCGAC
ATTCATCGCTTTCGGAAACAAATGGGATGTCGTGTTCTACCGGGGCGGGTTGGCGATTGCGGTGTCTCTCATTGCCGGGC
TGATCATCTCTTATCAATTTAAAGGGAATCAGCTGATCGAAAACGGGACGCACGGACATCACCACCATGTCCATGAGAGC
CAGTCTTTCCTGCAAAAGCTCGGCGGGACGCTCCGCCATGCAGTTGACGAGTTTTTCTCAGTCGGAAAATATTTGATCAT
CGGCGCATTTGTCGCAGCAGCGATGCAGACGTATATTAAAACATCGACTCTTTTGGCGATCGGGCAGAATGATGTATCTT
CCTCCCTCGTTATGATGGGGCTGTCATTTGTGCTGTCCCTTTGTTCAGAGGTCGACGCTTTTATCGCTTCTTCTTTCAGC
AGTACGTTTTCCCTCGGCTCCCTCATCGCCTTTCTCGTATTCGGAGCGATGGTGGACATCAAAAATCTGCTGATGATGCT
CGGCATCTTCAAAAAGCGCTTTGTGTTTGTCTTAATCCCCTACATCGCCGTTATTGTCTTAGCCGGATCACTGTTGGTAA
AGGGGTGA

Upstream 100 bases:

>100_bases
CTCCCATTATCTGACCCCCGCCACACAAAACCGCTTTTTTCAATTTATGTTATAATGCTAGATTGAAACTAAAAATATGG
ATTTGCGCGGAGGTTTTTTT

Downstream 100 bases:

>100_bases
GAACATGTTTCGCACATTCATTTTAATGTTGTTTACGTTTTTCTTTTTTCATCTTCATGCATCCGGCAATCTGACAAAAT
ATATTAATATGAAATACGCT

Product: YcgR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMMAKIIPKNRFLAVLSGTFAGVLFPACECGIVPIARRLL
LKGVPLHAAVAFMLTAPIINPIVLFSTFIAFGNKWDVVFYRGGLAIAVSLIAGLIISYQFKGNQLIENGTHGHHHHVHES
QSFLQKLGGTLRHAVDEFFSVGKYLIIGAFVAAAMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFS
STFSLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLVKG

Sequences:

>Translated_295_residues
MASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMMAKIIPKNRFLAVLSGTFAGVLFPACECGIVPIARRLL
LKGVPLHAAVAFMLTAPIINPIVLFSTFIAFGNKWDVVFYRGGLAIAVSLIAGLIISYQFKGNQLIENGTHGHHHHVHES
QSFLQKLGGTLRHAVDEFFSVGKYLIIGAFVAAAMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFS
STFSLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLVKG
>Mature_294_residues
ASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMMAKIIPKNRFLAVLSGTFAGVLFPACECGIVPIARRLLL
KGVPLHAAVAFMLTAPIINPIVLFSTFIAFGNKWDVVFYRGGLAIAVSLIAGLIISYQFKGNQLIENGTHGHHHHVHESQ
SFLQKLGGTLRHAVDEFFSVGKYLIIGAFVAAAMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFSS
TFSLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLVKG

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 31932; Mature: 31801

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMMAKIIPKNRFLAVLSGTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AGVLFPACECGIVPIARRLLLKGVPLHAAVAFMLTAPIINPIVLFSTFIAFGNKWDVVFY
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
RGGLAIAVSLIAGLIISYQFKGNQLIENGTHGHHHHVHESQSFLQKLGGTLRHAVDEFFS
ECHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGKYLIIGAFVAAAMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFSLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMMAKIIPKNRFLAVLSGTF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AGVLFPACECGIVPIARRLLLKGVPLHAAVAFMLTAPIINPIVLFSTFIAFGNKWDVVFY
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
RGGLAIAVSLIAGLIISYQFKGNQLIENGTHGHHHHVHESQSFLQKLGGTLRHAVDEFFS
ECHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGKYLIIGAFVAAAMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFSLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]