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The map label for this gene is ycgA [H]

Identifier: 52784145

GI number: 52784145

Start: 295313

End: 296713

Strand: Reverse

Name: ycgA [H]

Synonym: BLi00322

Alternate gene names: 52784145

Gene position: 296713-295313 (Counterclockwise)

Preceding gene: 52784147

Following gene: 52784144

Centisome position: 7.03

GC content: 49.82

Gene sequence:

>1401_bases
ATGAGCAATGGCACCCCACAGAAAACAAAACTGCACTTCCCACATACTTATGCTTTGATTTTTTTCATTATCATTTTAGC
TGCACTGGCTTCATACTTCATTCCATCAGGAGAATTTAAGCGGGTTGAAGAAGACGGCCAAACGGTTATCGTACAAGGGA
GCTACAAGCAGACTGACGCAGGTCCGGTCGGTTTTTTCGAGATGTTTAAAGCCATACCGGAGGGCATGATTCAATCGGCG
GATATTATTTTTTATATCTTTTTAATAGGCGGAGCTTTTGGCATCATCCATCAGACCGGTATGATTCGCGCCGGTGTCCA
TGTGCTCGTGCAGCGCTTGAAGAAACGCGGCTTCCTCCTGATCCCCGTCACCATGTTCGTCTTTTCCATCGGAGGCGCAA
CGATCGGTTTGTCTGAAGAGACGATTATTTTTATTCCGATCGGAATCGCTGTTGCGAGAGCGCTTGGCTATGATTCAATG
ACAGGGCTGGCGATGATTTCTCTAGGCGCGGCTGCAGGGTTCACCGGCGGCATGTTGAATCCGTTCACAGTCGGAATTGC
ACAGACAATTGCGGAAGTCCCGGTGTTTAGCGCCTTCGGTTATAGACTGGCCGTTTATGCCGCCATGCTCGGTTTCTCCA
TTTTTTATGTCATGCGTTATGCTCAACAAGTCAAAGCGCACCCGAATACCGGTTTGATGTATGGAAGCGAAACAGAGATA
AATGAAGAGACAGCCGCAGGACACGCTGATCTTTCCTTCACCGGAAGACACGGCCTCGTCCTGCTGATTACAGCATTGGG
CTTCGGCATCAATATGTTCGGTGTTTTTCAATGGGGATGGTTTTTAAGCGAGCTGTCGGCCGGCTTTCTCATCATCGGCT
TTGCCGCCGGTCTTGCGGGAGGACGCGGCATCAACAACACCTTCCATTCGTTTGTCGACGGCATGAAACAGGTTGTATAC
GGAGCGCTGATCGTCGGCTTCGCCCGTGCCATCGTCATCGTATTGGAAAACGGACATATTATCGATACGATCATCAACAG
CCTTGCTTCAGCAATCAGCTCGCTTCCGAATGAAATCAGCGCCATCGGCATGTTCGCCGTACAAATCGCGATTAACACGT
TTATTCCATCCGGAAGCGGACAGGCAGCCACAACGATGCCGCTTATGGCGCCTCTGGCCGATTTATTGGGATTCGAACGT
CAGATTGCCGTATTCGCTTATCAATACGGAGATGGGATCACCAACTCAATCATCCCGACCTCCGGCGTATTGCTGGCTTC
ACTGTCAATCGCAGGCGTCCCTTATGAACGCTGGGTCAAGTTTGTCTGGAAGCTGATCGCAGGCTGGATTATCATCGGCG
CCGCTGCGATTGTTATCGCTATGATAATTGGTATTAAGTAA

Upstream 100 bases:

>100_bases
GAAAGTTTTTTCCAGGGTTGACAAAGTAAAGCTCATATCCTCAAAATGTTTAAATATATAATTATCTGAATATTAATACA
TTATAAAGGAGACGAACGGA

Downstream 100 bases:

>100_bases
ACATCCGGTCCACAATATGCAGCCGGTGCCCCCGGCTGCATTCCCCCATATATGCCTCCATCTCTCTGACTATAGAAAAG
CCTTACACCATCAAAACCGC

Product: YcgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSNGTPQKTKLHFPHTYALIFFIIILAALASYFIPSGEFKRVEEDGQTVIVQGSYKQTDAGPVGFFEMFKAIPEGMIQSA
DIIFYIFLIGGAFGIIHQTGMIRAGVHVLVQRLKKRGFLLIPVTMFVFSIGGATIGLSEETIIFIPIGIAVARALGYDSM
TGLAMISLGAAAGFTGGMLNPFTVGIAQTIAEVPVFSAFGYRLAVYAAMLGFSIFYVMRYAQQVKAHPNTGLMYGSETEI
NEETAAGHADLSFTGRHGLVLLITALGFGINMFGVFQWGWFLSELSAGFLIIGFAAGLAGGRGINNTFHSFVDGMKQVVY
GALIVGFARAIVIVLENGHIIDTIINSLASAISSLPNEISAIGMFAVQIAINTFIPSGSGQAATTMPLMAPLADLLGFER
QIAVFAYQYGDGITNSIIPTSGVLLASLSIAGVPYERWVKFVWKLIAGWIIIGAAAIVIAMIIGIK

Sequences:

>Translated_466_residues
MSNGTPQKTKLHFPHTYALIFFIIILAALASYFIPSGEFKRVEEDGQTVIVQGSYKQTDAGPVGFFEMFKAIPEGMIQSA
DIIFYIFLIGGAFGIIHQTGMIRAGVHVLVQRLKKRGFLLIPVTMFVFSIGGATIGLSEETIIFIPIGIAVARALGYDSM
TGLAMISLGAAAGFTGGMLNPFTVGIAQTIAEVPVFSAFGYRLAVYAAMLGFSIFYVMRYAQQVKAHPNTGLMYGSETEI
NEETAAGHADLSFTGRHGLVLLITALGFGINMFGVFQWGWFLSELSAGFLIIGFAAGLAGGRGINNTFHSFVDGMKQVVY
GALIVGFARAIVIVLENGHIIDTIINSLASAISSLPNEISAIGMFAVQIAINTFIPSGSGQAATTMPLMAPLADLLGFER
QIAVFAYQYGDGITNSIIPTSGVLLASLSIAGVPYERWVKFVWKLIAGWIIIGAAAIVIAMIIGIK
>Mature_465_residues
SNGTPQKTKLHFPHTYALIFFIIILAALASYFIPSGEFKRVEEDGQTVIVQGSYKQTDAGPVGFFEMFKAIPEGMIQSAD
IIFYIFLIGGAFGIIHQTGMIRAGVHVLVQRLKKRGFLLIPVTMFVFSIGGATIGLSEETIIFIPIGIAVARALGYDSMT
GLAMISLGAAAGFTGGMLNPFTVGIAQTIAEVPVFSAFGYRLAVYAAMLGFSIFYVMRYAQQVKAHPNTGLMYGSETEIN
EETAAGHADLSFTGRHGLVLLITALGFGINMFGVFQWGWFLSELSAGFLIIGFAAGLAGGRGINNTFHSFVDGMKQVVYG
ALIVGFARAIVIVLENGHIIDTIINSLASAISSLPNEISAIGMFAVQIAINTFIPSGSGQAATTMPLMAPLADLLGFERQ
IAVFAYQYGDGITNSIIPTSGVLLASLSIAGVPYERWVKFVWKLIAGWIIIGAAAIVIAMIIGIK

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=503, Percent_Identity=33.3996023856859, Blast_Score=249, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 49688; Mature: 49557

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGTPQKTKLHFPHTYALIFFIIILAALASYFIPSGEFKRVEEDGQTVIVQGSYKQTDA
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCC
GPVGFFEMFKAIPEGMIQSADIIFYIFLIGGAFGIIHQTGMIRAGVHVLVQRLKKRGFLL
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
IPVTMFVFSIGGATIGLSEETIIFIPIGIAVARALGYDSMTGLAMISLGAAAGFTGGMLN
EEHHHHHHHHCCCEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PFTVGIAQTIAEVPVFSAFGYRLAVYAAMLGFSIFYVMRYAQQVKAHPNTGLMYGSETEI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
NEETAAGHADLSFTGRHGLVLLITALGFGINMFGVFQWGWFLSELSAGFLIIGFAAGLAG
CHHHCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCC
GRGINNTFHSFVDGMKQVVYGALIVGFARAIVIVLENGHIIDTIINSLASAISSLPNEIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHH
AIGMFAVQIAINTFIPSGSGQAATTMPLMAPLADLLGFERQIAVFAYQYGDGITNSIIPT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCC
SGVLLASLSIAGVPYERWVKFVWKLIAGWIIIGAAAIVIAMIIGIK
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNGTPQKTKLHFPHTYALIFFIIILAALASYFIPSGEFKRVEEDGQTVIVQGSYKQTDA
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCC
GPVGFFEMFKAIPEGMIQSADIIFYIFLIGGAFGIIHQTGMIRAGVHVLVQRLKKRGFLL
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
IPVTMFVFSIGGATIGLSEETIIFIPIGIAVARALGYDSMTGLAMISLGAAAGFTGGMLN
EEHHHHHHHHCCCEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PFTVGIAQTIAEVPVFSAFGYRLAVYAAMLGFSIFYVMRYAQQVKAHPNTGLMYGSETEI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
NEETAAGHADLSFTGRHGLVLLITALGFGINMFGVFQWGWFLSELSAGFLIIGFAAGLAG
CHHHCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCC
GRGINNTFHSFVDGMKQVVYGALIVGFARAIVIVLENGHIIDTIINSLASAISSLPNEIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHH
AIGMFAVQIAINTFIPSGSGQAATTMPLMAPLADLLGFERQIAVFAYQYGDGITNSIIPT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCC
SGVLLASLSIAGVPYERWVKFVWKLIAGWIIIGAAAIVIAMIIGIK
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]