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The map label for this gene is yczC [H]

Identifier: 52784133

GI number: 52784133

Start: 283145

End: 283498

Strand: Reverse

Name: yczC [H]

Synonym: BLi00310

Alternate gene names: 52784133

Gene position: 283498-283145 (Counterclockwise)

Preceding gene: 52784140

Following gene: 52784122

Centisome position: 6.71

GC content: 48.02

Gene sequence:

>354_bases
TTGATCGATTGCGTATTGGCGGTCGGGTTACACTTTTCATCCGCATGGATATTCGGCGACGGATCTCATGAAGTTGCTGC
AGCCGCCCTGCTGGTATACGTTTTGTATCCGCTTCTGATGCCGCTGACAAAGCTCCAGGGCACGATTGGAAAAGCAATTT
TTAGAATTCGTATCGTTTCTGATGATACGGGCCGACGGATTAAGCTTTGGCAGGCTTTCGTGCGCTACATCGTCTCATGG
GTGCATATCTTTTTCGGTCTGCTGTATTTAACCGTCGTTTTTTCAGGAACGAAACAAGCGGTCCACGATTTCGCGGCTAG
AACATATGTCATGAAAACGTCCGACACTGAGTAA

Upstream 100 bases:

>100_bases
TATAAAATGGTTAATGTTGTGTTTTTATCATTCATTTATAATAGAGAGGATGTTATACATATTGCAATACGCTCGTTTTT
GGGTTAGAGCGGGTGCATGG

Downstream 100 bases:

>100_bases
ACCACCTTTATTCATTTAAACAGAAATAAAAAGGGATATGAATCCCTTTCTCTATTTCCGGTATTCCAGCAGACTAACCG
TCAGGTGCACTAGCAAGCAC

Product: YczC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIDCVLAVGLHFSSAWIFGDGSHEVAAAALLVYVLYPLLMPLTKLQGTIGKAIFRIRIVSDDTGRRIKLWQAFVRYIVSW
VHIFFGLLYLTVVFSGTKQAVHDFAARTYVMKTSDTE

Sequences:

>Translated_117_residues
MIDCVLAVGLHFSSAWIFGDGSHEVAAAALLVYVLYPLLMPLTKLQGTIGKAIFRIRIVSDDTGRRIKLWQAFVRYIVSW
VHIFFGLLYLTVVFSGTKQAVHDFAARTYVMKTSDTE
>Mature_117_residues
MIDCVLAVGLHFSSAWIFGDGSHEVAAAALLVYVLYPLLMPLTKLQGTIGKAIFRIRIVSDDTGRRIKLWQAFVRYIVSW
VHIFFGLLYLTVVFSGTKQAVHDFAARTYVMKTSDTE

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010432 [H]

Pfam domain/function: PF06271 RDD [H]

EC number: NA

Molecular weight: Translated: 13156; Mature: 13156

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDCVLAVGLHFSSAWIFGDGSHEVAAAALLVYVLYPLLMPLTKLQGTIGKAIFRIRIVS
CCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
DDTGRRIKLWQAFVRYIVSWVHIFFGLLYLTVVFSGTKQAVHDFAARTYVMKTSDTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MIDCVLAVGLHFSSAWIFGDGSHEVAAAALLVYVLYPLLMPLTKLQGTIGKAIFRIRIVS
CCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
DDTGRRIKLWQAFVRYIVSWVHIFFGLLYLTVVFSGTKQAVHDFAARTYVMKTSDTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]