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The map label for this gene is ydfS [H]

Identifier: 52784094

GI number: 52784094

Start: 243147

End: 243869

Strand: Reverse

Name: ydfS [H]

Synonym: BLi00270

Alternate gene names: 52784094

Gene position: 243869-243147 (Counterclockwise)

Preceding gene: 52784095

Following gene: 52784090

Centisome position: 5.78

GC content: 41.77

Gene sequence:

>723_bases
ATGGAAACTGTGAAAGAAATTTTGGTTGTCTACGGGCGAATCATTACCATCCTTCCGCTTTTATTGGTTGTCACATTGTT
CATGGGAAAACGCTCAATCGGAGAAATGCCTGTGTTTGATTTTTTAATCATTATTACATTGGGTGCCGTTGTCGGAGCGG
ACATAGCCGATCCGAAGATTGAACATTTGCATACCGCCGCTGCGGTGGCTGCGATTGCCCTATTGCAAAGACTCGCTTCA
AATCTCATGATCAAATACCGAACGCTGGGACGTCTAATTACATTTGAACCGACCATCGTCATCAAAAACGGAACGTTTAT
CGTCGGCAATCTGAAACGAATCAAATATTCAGTGGATAATATTCTGCAAATGCTTCGGGAAAAAGACGTTTTCAATGTCA
GCGACGTAGAAATGGCGTTTGTAGAGGCGAACGGAAATTTAACGGTATACAAAAAGCCAAATAAAATGGAAATCACAGCT
GAAGATATGGGAATTCAAAAAAGCAGCGGCGAATTTTCATATCCGGTCATCGTTGACGGAAAAGTGTACACGTCTGTCCT
TCAGCAATTGAATGTAACAGAAAGCTGGCTCAAAAACCAGCTGAAGAAGAAAGGGCTTGAACGAATGGATGAAATCTTTT
TCGCTTCGGTTAATCAAAACCATGAACTGCATGTTTCGCTCGATAATCAAACGACGAAAATTGAGCCGGAGCTTTTGCAT
TAA

Upstream 100 bases:

>100_bases
TGCCAGAAATAACCGATTCCTATCCATATCATGATCTCAACTCCAAAATGACATCCGTCAACCTTGAATTGGCAAAAGGC
TACAAAAAGGAAGAAAGACA

Downstream 100 bases:

>100_bases
AAAGCTCCGGCGTGTTTTAAATTCCGCCGGAACTGCCTTTTTTCATCCGCCGCTTTCGGGACAGAAATCGTTGTGAATCA
TATAATATTCGAACACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
METVKEILVVYGRIITILPLLLVVTLFMGKRSIGEMPVFDFLIIITLGAVVGADIADPKIEHLHTAAAVAAIALLQRLAS
NLMIKYRTLGRLITFEPTIVIKNGTFIVGNLKRIKYSVDNILQMLREKDVFNVSDVEMAFVEANGNLTVYKKPNKMEITA
EDMGIQKSSGEFSYPVIVDGKVYTSVLQQLNVTESWLKNQLKKKGLERMDEIFFASVNQNHELHVSLDNQTTKIEPELLH

Sequences:

>Translated_240_residues
METVKEILVVYGRIITILPLLLVVTLFMGKRSIGEMPVFDFLIIITLGAVVGADIADPKIEHLHTAAAVAAIALLQRLAS
NLMIKYRTLGRLITFEPTIVIKNGTFIVGNLKRIKYSVDNILQMLREKDVFNVSDVEMAFVEANGNLTVYKKPNKMEITA
EDMGIQKSSGEFSYPVIVDGKVYTSVLQQLNVTESWLKNQLKKKGLERMDEIFFASVNQNHELHVSLDNQTTKIEPELLH
>Mature_240_residues
METVKEILVVYGRIITILPLLLVVTLFMGKRSIGEMPVFDFLIIITLGAVVGADIADPKIEHLHTAAAVAAIALLQRLAS
NLMIKYRTLGRLITFEPTIVIKNGTFIVGNLKRIKYSVDNILQMLREKDVFNVSDVEMAFVEANGNLTVYKKPNKMEITA
EDMGIQKSSGEFSYPVIVDGKVYTSVLQQLNVTESWLKNQLKKKGLERMDEIFFASVNQNHELHVSLDNQTTKIEPELLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 26974; Mature: 26974

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVKEILVVYGRIITILPLLLVVTLFMGKRSIGEMPVFDFLIIITLGAVVGADIADPKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
EHLHTAAAVAAIALLQRLASNLMIKYRTLGRLITFEPTIVIKNGTFIVGNLKRIKYSVDN
HHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCEEEECCEEEEECCEEEEECHHHHHHHHHH
ILQMLREKDVFNVSDVEMAFVEANGNLTVYKKPNKMEITAEDMGIQKSSGEFSYPVIVDG
HHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCEEEEHHHCCCCCCCCCCCCCEEECC
KVYTSVLQQLNVTESWLKNQLKKKGLERMDEIFFASVNQNHELHVSLDNQTTKIEPELLH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCC
>Mature Secondary Structure
METVKEILVVYGRIITILPLLLVVTLFMGKRSIGEMPVFDFLIIITLGAVVGADIADPKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
EHLHTAAAVAAIALLQRLASNLMIKYRTLGRLITFEPTIVIKNGTFIVGNLKRIKYSVDN
HHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCEEEECCEEEEECCEEEEECHHHHHHHHHH
ILQMLREKDVFNVSDVEMAFVEANGNLTVYKKPNKMEITAEDMGIQKSSGEFSYPVIVDG
HHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCEEEEHHHCCCCCCCCCCCCCEEECC
KVYTSVLQQLNVTESWLKNQLKKKGLERMDEIFFASVNQNHELHVSLDNQTTKIEPELLH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]