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The map label for this gene is yabS [H]

Identifier: 52783922

GI number: 52783922

Start: 77681

End: 78418

Strand: Direct

Name: yabS [H]

Synonym: BLi00081

Alternate gene names: 52783922

Gene position: 77681-78418 (Clockwise)

Preceding gene: 52783921

Following gene: 52783923

Centisome position: 1.84

GC content: 48.37

Gene sequence:

>738_bases
ATGAAAAAGGGGCATTTGAATCAAATCCTGCTTTTGACGGACGGCTGTTCAAACCGCGGCGAAGACCCGCAGGCCATGGC
TGCCTTTGCGAAAGAGCAGGGAATTACCGTGAATGTGATTGGGATTATGGACGAGCATGAAATGGATCAGGAGGCGATGA
AAGAAGTCGAAGGGATCGCTCTCGCAGGCGGAGGAGTTCACCAGGTGGTTTACACGTCGCAGCTGTCGCAGACCGTTCAA
ATGGTGACAAAAAAGGCGATGACGCAAACCCTTCAAGGCGTGGTCAACAGTGAGCTCAAACAAATTCTCGGCAAGCATAC
CGAAATGGATGAACTGCCTCCTGATAAACGCGGTGAAGTCATGGAAGTCGTTGACGAGCTTGGTGAGACCGTGCATCTTC
ATGTACTGGTTCTTGTCGATACAAGCGCAAGCATGAATCCGAAGCTTCCGACCGTTAAAGAAGCGTTGATAGATCTTTCC
ATCAGTCTCAATTCAAGAATCGGCGAAAACGAATTTGCGATGCTTATATTTCCCGGGAAAAAACAAGAGGTCGAACTTGT
GCTCGATTGGACCCCGAAGTTTGAATCTCTTTCTTCAATATTTTCCAAGCTTTCAGCCGGTGGCATTACACCGACAGGAC
CCGCAATACGAGAGGCGATTCAGCATTTTAACAAAATCGGCTCAAGAAGGAGAATGTTAGAAGACGATGAAAAACGCTTC
GACGAGTTTGGCGGCTAG

Upstream 100 bases:

>100_bases
CAAAAGAATCAAGAGATTTCTTAGCATTCGTATAAATCAAATTTCTTCTGGCGATGATGGAACTAAATCAAGATATCTTT
GTCCAGGAGGAATAAAAACG

Downstream 100 bases:

>100_bases
TCTAAAGCCGGGTGCAGCCGTTGTTGGAAAGTGGAACAATCATTCCTACAAGATCATCAGACAGCTTGGAAAAGGGGCAA
ATGGGGTTGTTTATCTGGCC

Product: YabS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQEAMKEVEGIALAGGGVHQVVYTSQLSQTVQ
MVTKKAMTQTLQGVVNSELKQILGKHTEMDELPPDKRGEVMEVVDELGETVHLHVLVLVDTSASMNPKLPTVKEALIDLS
ISLNSRIGENEFAMLIFPGKKQEVELVLDWTPKFESLSSIFSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRF
DEFGG

Sequences:

>Translated_245_residues
MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQEAMKEVEGIALAGGGVHQVVYTSQLSQTVQ
MVTKKAMTQTLQGVVNSELKQILGKHTEMDELPPDKRGEVMEVVDELGETVHLHVLVLVDTSASMNPKLPTVKEALIDLS
ISLNSRIGENEFAMLIFPGKKQEVELVLDWTPKFESLSSIFSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRF
DEFGG
>Mature_245_residues
MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQEAMKEVEGIALAGGGVHQVVYTSQLSQTVQ
MVTKKAMTQTLQGVVNSELKQILGKHTEMDELPPDKRGEVMEVVDELGETVHLHVLVLVDTSASMNPKLPTVKEALIDLS
ISLNSRIGENEFAMLIFPGKKQEVELVLDWTPKFESLSSIFSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRF
DEFGG

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26969; Mature: 26969

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQEAMKEVEGIA
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHHCCEE
LAGGGVHQVVYTSQLSQTVQMVTKKAMTQTLQGVVNSELKQILGKHTEMDELPPDKRGEV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MEVVDELGETVHLHVLVLVDTSASMNPKLPTVKEALIDLSISLNSRIGENEFAMLIFPGK
HHHHHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEECCC
KQEVELVLDWTPKFESLSSIFSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRF
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
DEFGG
HHCCC
>Mature Secondary Structure
MKKGHLNQILLLTDGCSNRGEDPQAMAAFAKEQGITVNVIGIMDEHEMDQEAMKEVEGIA
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHHCCEE
LAGGGVHQVVYTSQLSQTVQMVTKKAMTQTLQGVVNSELKQILGKHTEMDELPPDKRGEV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MEVVDELGETVHLHVLVLVDTSASMNPKLPTVKEALIDLSISLNSRIGENEFAMLIFPGK
HHHHHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEECCC
KQEVELVLDWTPKFESLSSIFSKLSAGGITPTGPAIREAIQHFNKIGSRRRMLEDDEKRF
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
DEFGG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]