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The map label for this gene is yabM [H]

Identifier: 52783914

GI number: 52783914

Start: 69398

End: 70990

Strand: Direct

Name: yabM [H]

Synonym: BLi00070

Alternate gene names: 52783914

Gene position: 69398-70990 (Clockwise)

Preceding gene: 52783913

Following gene: 52783915

Centisome position: 1.64

GC content: 51.16

Gene sequence:

>1593_bases
ATGGGGTTTTTAAAGGGCCAAAGACAATTGCTTTGGCAAGGCGCCTTTGTACTTTCATTGGCGGGGATATTATCAAAGAT
ATTAAGCGCTGTATATAGAGTGCCTTTTCAAAATATAGTTGGAGATGTCGGTTTTTATATTTTTCAGCAGGTGTACCCGA
TGATCGGAATATCTGTCATGCTTGCCACCTCCGGGTTCCCGGTCATCATTTCAAAGTTGCTGAATGATTACGGGTCCGCA
AACCGGGCAAAGATTCTCCGCGTGTCTATGCTTTTTTTATCGGCAGTCGGCCTTGGCTTTTTTCTTCTCTTGTTTGCCGG
AGCCGGAGCCATCGCAGGGTTTATGGGCGATCCCGACCTTGCCGGGGTGATCCGCGCCGTGTCGTTTTCTTATTTGCTGC
TACCGTTCGTATCTTTGTTGAGAGGCTATTTTCAAGGAAGCGAACGGATGCTGCCGACCGCACTTTCTCAAATTGGAGAA
CAGACACTCCGGGTCGGGGCGATTCTTGTTTTGACATGGTGGCTCGTCAAAAGCGGCTTTTCCTTATATGACGCCGGTGC
AGGGGCGGCCTTTGGCTCCCTTGTCGGCGGCCTTGCGGCGTTTTTCATTCTCGCCGTGTTTTGGGCCAAGCGTGAAAAGA
AAGCCACTGCCGCCCGGATGGAGGCCGGTACGGGTGATATTTTGAAACAGCTGTGTCTGTATTCGGTTACGATTTGTACC
GCCGGCCTCATGCTGATTCTCATCCAGCTCGTCGACGCATTGCACTTGTATTCATTGCTGGCCGGACAAGGAATGGGCGA
ACTTCAGGCGAAACATACAAAAGGAGTGTATGACAGGGGGCAGCCGCTTTTGCAGCTGGGAACCGTTTTTGCTGCGAGCA
TTGCGACGGCTCTTGTCCCGTCCCTTACGAAAGCGAAGAAAAAGGGAGAAACTGCAGTGCTGGAGGAAAAGATCCGGTAT
TCGCTAAAAATGAGCTTTGTCATCGGCACTGGAGCAGCCGCCGGTCTGATTTGTATTTTGGAGCCGGTCAATGTCATGCT
GTTTAAAAACAGCGATGGAACGGCTGCGCTCCAAATTTTCAGCGCGTCGATTCTCTTTGCATCGCTGGCGATGACGATGA
CCGCTGTTTTGCAAGGACTCGGCAATACATGTCTTCCGGCTGTTTCCGTCTGCTGCGGCTTTTTGGTGAAAGCCGTATTG
AACGAGCTCCTGATCCCCGGTTTCGGCATTTCCGGCGCCGCTTTTGCGACTATGATGTCATTCGCCGCTGTTGCGGGGCT
CAATTTTTTTCAGCTGAAAAGAAAAGGCTGGATTAAGCTGTCGGAATACAGGATAGCGGGTGTTTTGTTGTCGGCTGTGA
TCATGTCGGCCGCTCTGGCGGTGTGGCTTTTTGCATTTGAAGCGGCCATACCACATAAAAGCAGATGGATCTCAGCGGCG
GAAAGTCTTAGCGCCGTTTTCGTCGGCGGCGTTGTCTTTTTGTCCGGTATCTTCACATTGCGCGTGTTTTCAGAAAAAGA
ACTTGAGCTTGTGCCTTTTGGCAGCAAGCTCCTGACATTAAAACGAGAAAGGGGCGGCAGGCATGGCCGGTAA

Upstream 100 bases:

>100_bases
TTTTAATTCACACTTGCAGGAGGAGTGCAAGCCCTGAATATGGTATAATAAGCTCGTTTCGTGCGCTTTTTAGAAAGCGC
ATTGGAAGGAGCTTAAAGGA

Downstream 100 bases:

>100_bases
AATCACGGTAGTCGGCCTTGGGGCAGGCGATATGAATCAATTAACCCTCGGTGTATATAAACGGCTCACACAAGCGGAGG
TTCTTTATGTCAGGACGAAA

Product: YabM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MGFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFYIFQQVYPMIGISVMLATSGFPVIISKLLNDYGSA
NRAKILRVSMLFLSAVGLGFFLLLFAGAGAIAGFMGDPDLAGVIRAVSFSYLLLPFVSLLRGYFQGSERMLPTALSQIGE
QTLRVGAILVLTWWLVKSGFSLYDAGAGAAFGSLVGGLAAFFILAVFWAKREKKATAARMEAGTGDILKQLCLYSVTICT
AGLMLILIQLVDALHLYSLLAGQGMGELQAKHTKGVYDRGQPLLQLGTVFAASIATALVPSLTKAKKKGETAVLEEKIRY
SLKMSFVIGTGAAAGLICILEPVNVMLFKNSDGTAALQIFSASILFASLAMTMTAVLQGLGNTCLPAVSVCCGFLVKAVL
NELLIPGFGISGAAFATMMSFAAVAGLNFFQLKRKGWIKLSEYRIAGVLLSAVIMSAALAVWLFAFEAAIPHKSRWISAA
ESLSAVFVGGVVFLSGIFTLRVFSEKELELVPFGSKLLTLKRERGGRHGR

Sequences:

>Translated_530_residues
MGFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFYIFQQVYPMIGISVMLATSGFPVIISKLLNDYGSA
NRAKILRVSMLFLSAVGLGFFLLLFAGAGAIAGFMGDPDLAGVIRAVSFSYLLLPFVSLLRGYFQGSERMLPTALSQIGE
QTLRVGAILVLTWWLVKSGFSLYDAGAGAAFGSLVGGLAAFFILAVFWAKREKKATAARMEAGTGDILKQLCLYSVTICT
AGLMLILIQLVDALHLYSLLAGQGMGELQAKHTKGVYDRGQPLLQLGTVFAASIATALVPSLTKAKKKGETAVLEEKIRY
SLKMSFVIGTGAAAGLICILEPVNVMLFKNSDGTAALQIFSASILFASLAMTMTAVLQGLGNTCLPAVSVCCGFLVKAVL
NELLIPGFGISGAAFATMMSFAAVAGLNFFQLKRKGWIKLSEYRIAGVLLSAVIMSAALAVWLFAFEAAIPHKSRWISAA
ESLSAVFVGGVVFLSGIFTLRVFSEKELELVPFGSKLLTLKRERGGRHGR
>Mature_529_residues
GFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFYIFQQVYPMIGISVMLATSGFPVIISKLLNDYGSAN
RAKILRVSMLFLSAVGLGFFLLLFAGAGAIAGFMGDPDLAGVIRAVSFSYLLLPFVSLLRGYFQGSERMLPTALSQIGEQ
TLRVGAILVLTWWLVKSGFSLYDAGAGAAFGSLVGGLAAFFILAVFWAKREKKATAARMEAGTGDILKQLCLYSVTICTA
GLMLILIQLVDALHLYSLLAGQGMGELQAKHTKGVYDRGQPLLQLGTVFAASIATALVPSLTKAKKKGETAVLEEKIRYS
LKMSFVIGTGAAAGLICILEPVNVMLFKNSDGTAALQIFSASILFASLAMTMTAVLQGLGNTCLPAVSVCCGFLVKAVLN
ELLIPGFGISGAAFATMMSFAAVAGLNFFQLKRKGWIKLSEYRIAGVLLSAVIMSAALAVWLFAFEAAIPHKSRWISAAE
SLSAVFVGGVVFLSGIFTLRVFSEKELELVPFGSKLLTLKRERGGRHGR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 56533; Mature: 56402

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFYIFQQVYPMIGISVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LATSGFPVIISKLLNDYGSANRAKILRVSMLFLSAVGLGFFLLLFAGAGAIAGFMGDPDL
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHH
AGVIRAVSFSYLLLPFVSLLRGYFQGSERMLPTALSQIGEQTLRVGAILVLTWWLVKSGF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLYDAGAGAAFGSLVGGLAAFFILAVFWAKREKKATAARMEAGTGDILKQLCLYSVTICT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AGLMLILIQLVDALHLYSLLAGQGMGELQAKHTKGVYDRGQPLLQLGTVFAASIATALVP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLTKAKKKGETAVLEEKIRYSLKMSFVIGTGAAAGLICILEPVNVMLFKNSDGTAALQIF
HHHHHHHCCCHHHHHHHHHHHHEEEEEEECCHHHHHHHEECCCEEEEEECCCCCHHHHHH
SASILFASLAMTMTAVLQGLGNTCLPAVSVCCGFLVKAVLNELLIPGFGISGAAFATMMS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FAAVAGLNFFQLKRKGWIKLSEYRIAGVLLSAVIMSAALAVWLFAFEAAIPHKSRWISAA
HHHHHCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ESLSAVFVGGVVFLSGIFTLRVFSEKELELVPFGSKLLTLKRERGGRHGR
HHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GFLKGQRQLLWQGAFVLSLAGILSKILSAVYRVPFQNIVGDVGFYIFQQVYPMIGISVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]