Click here to switch to the map view.

The map label for this gene is yabN [H]

Identifier: 52783915

GI number: 52783915

Start: 70980

End: 72449

Strand: Direct

Name: yabN [H]

Synonym: BLi00071

Alternate gene names: 52783915

Gene position: 70980-72449 (Clockwise)

Preceding gene: 52783914

Following gene: 52783916

Centisome position: 1.68

GC content: 47.82

Gene sequence:

>1470_bases
ATGGCCGGTAAAATCACGGTAGTCGGCCTTGGGGCAGGCGATATGAATCAATTAACCCTCGGTGTATATAAACGGCTCAC
ACAAGCGGAGGTTCTTTATGTCAGGACGAAAGACCATCCATTAATAGAAGACCTGAAAAAAGAAATAGCGGAGATTCATT
TTTTTGATGAGGTCTATGAAAAGCATGATCAATTCGAAGATGTTTACGAGGAGATCGTAGAGCGGCTTTTTGAGGAGGCG
AAGCAGGGGGATGTGCTCTATGCCGTTCCAGGCCATCCGTTCGTCGCTGAAAAAACGGTCCAGCTTTTGCTTGAGAGGCG
TGGGGCTCATCAGGCCGATGTCGTCGTCGAGGGAGGCCACAGCTTTATTGATGCGACGTTAAATGCTTTGCAGATCGATC
CGATTGACGGGTTTCAGTTTGTCGATGCCGTCCGGTTTTCAGCCGACGAAGTCGAGCTCCGTCATCATTTGATTATTTGC
CAGGTATATGATCAAATGACGGCTTCAGAGGTCAAACTGACGTTAATGGAAAAGCTTCCTGATGACTATGAAGTCGTCAT
TGTAACAGCGGCCGGAAGCAGCATGCAAGACATTCGGACAGTGCCTCTTTACGAATTGGACAGAAGCGTGGGCATCAATA
ATTTAACGAGCGTCTATGTGCCGCCTGTCAAAGACGAAGAGATTCTCCACCAGGAATTTTCGATGTTCCGCAGTGTCATC
AGAAAGCTGCGCGGACCGGACGGTTGCCCTTGGGACCGAAAACAAACCCATGAGTCGCTCAAAAAGTACTTAATCGAGGA
ATGCTATGAGGTGCTAGAGGCGATTGATGAAGAAGATCCCGACCACTTAGTAGAGGAGCTTGGCGATGTGATGCTCCAAG
TTCTTCTGCATGCGCAGATCGGCGAGGATGACGGCCTTTTTACAATTGACGATGTGATTCGCGGCATCACCGCAAAAATG
ATCAGAAGGCATCCGCACGTCTTCGGAGAGGTCTCTGTTCGTGATGAGGCCGACGTCATGGTAAACTGGGAAGAGATCAA
GAAGCAGGAGAAACAAGCGGACGATAAATCCCTCCTCGACGATATTCCAAAGCCGCTTCCTGCTTTGTCAAAAGCGAACA
AGCTTCAGAAAAAGGCGGCAAAGACCGGGTTCGACTGGTCGAATGTCCAGGATATTTGGGATAAAGTCCAGGAGGAAATG
AAAGAATTTTCTTCAGAAATTTCCGAAGCCGAACAGCACAGCAAAAAAATGAAAGAAGAGTTCGGCGACCTTTTATTCGC
GCTCGTCAATATCGGCCGGTTTTATAAAATTGAACCGGAAGAAGCCCTCGCGATGACAAACGCCAAGTTTTACAGAAGGT
TCACATATATTGAACAATCTGCAAAGCGCATGGGCAAGGATCTGGAAAGTATGACGCTTGAAGAAATGGACGAACTGTGG
AATGAAGCGAAAGGCATTGAAAGGAGCTGA

Upstream 100 bases:

>100_bases
TCCGGTATCTTCACATTGCGCGTGTTTTCAGAAAAAGAACTTGAGCTTGTGCCTTTTGGCAGCAAGCTCCTGACATTAAA
ACGAGAAAGGGGCGGCAGGC

Downstream 100 bases:

>100_bases
CAAGCGATGAGACTCGACAAATTTCTCAAAGTATCAAGGCTGATTAAAAGACGGACGCTTGCAAAAGAAGTGGCTGACCA
GGGAAGAATTTCGATCAATG

Product: YabN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MAGKITVVGLGAGDMNQLTLGVYKRLTQAEVLYVRTKDHPLIEDLKKEIAEIHFFDEVYEKHDQFEDVYEEIVERLFEEA
KQGDVLYAVPGHPFVAEKTVQLLLERRGAHQADVVVEGGHSFIDATLNALQIDPIDGFQFVDAVRFSADEVELRHHLIIC
QVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSSMQDIRTVPLYELDRSVGINNLTSVYVPPVKDEEILHQEFSMFRSVI
RKLRGPDGCPWDRKQTHESLKKYLIEECYEVLEAIDEEDPDHLVEELGDVMLQVLLHAQIGEDDGLFTIDDVIRGITAKM
IRRHPHVFGEVSVRDEADVMVNWEEIKKQEKQADDKSLLDDIPKPLPALSKANKLQKKAAKTGFDWSNVQDIWDKVQEEM
KEFSSEISEAEQHSKKMKEEFGDLLFALVNIGRFYKIEPEEALAMTNAKFYRRFTYIEQSAKRMGKDLESMTLEEMDELW
NEAKGIERS

Sequences:

>Translated_489_residues
MAGKITVVGLGAGDMNQLTLGVYKRLTQAEVLYVRTKDHPLIEDLKKEIAEIHFFDEVYEKHDQFEDVYEEIVERLFEEA
KQGDVLYAVPGHPFVAEKTVQLLLERRGAHQADVVVEGGHSFIDATLNALQIDPIDGFQFVDAVRFSADEVELRHHLIIC
QVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSSMQDIRTVPLYELDRSVGINNLTSVYVPPVKDEEILHQEFSMFRSVI
RKLRGPDGCPWDRKQTHESLKKYLIEECYEVLEAIDEEDPDHLVEELGDVMLQVLLHAQIGEDDGLFTIDDVIRGITAKM
IRRHPHVFGEVSVRDEADVMVNWEEIKKQEKQADDKSLLDDIPKPLPALSKANKLQKKAAKTGFDWSNVQDIWDKVQEEM
KEFSSEISEAEQHSKKMKEEFGDLLFALVNIGRFYKIEPEEALAMTNAKFYRRFTYIEQSAKRMGKDLESMTLEEMDELW
NEAKGIERS
>Mature_488_residues
AGKITVVGLGAGDMNQLTLGVYKRLTQAEVLYVRTKDHPLIEDLKKEIAEIHFFDEVYEKHDQFEDVYEEIVERLFEEAK
QGDVLYAVPGHPFVAEKTVQLLLERRGAHQADVVVEGGHSFIDATLNALQIDPIDGFQFVDAVRFSADEVELRHHLIICQ
VYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSSMQDIRTVPLYELDRSVGINNLTSVYVPPVKDEEILHQEFSMFRSVIR
KLRGPDGCPWDRKQTHESLKKYLIEECYEVLEAIDEEDPDHLVEELGDVMLQVLLHAQIGEDDGLFTIDDVIRGITAKMI
RRHPHVFGEVSVRDEADVMVNWEEIKKQEKQADDKSLLDDIPKPLPALSKANKLQKKAAKTGFDWSNVQDIWDKVQEEMK
EFSSEISEAEQHSKKMKEEFGDLLFALVNIGRFYKIEPEEALAMTNAKFYRRFTYIEQSAKRMGKDLESMTLEEMDELWN
EAKGIERS

Specific function: Unknown

COG id: COG3956

COG function: function code R; Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789144, Length=249, Percent_Identity=42.9718875502008, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR004518
- InterPro:   IPR011551 [H]

Pfam domain/function: PF03819 MazG; PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 56154; Mature: 56023

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKITVVGLGAGDMNQLTLGVYKRLTQAEVLYVRTKDHPLIEDLKKEIAEIHFFDEVYE
CCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KHDQFEDVYEEIVERLFEEAKQGDVLYAVPGHPFVAEKTVQLLLERRGAHQADVVVEGGH
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC
SFIDATLNALQIDPIDGFQFVDAVRFSADEVELRHHLIICQVYDQMTASEVKLTLMEKLP
HHHHHHHHHEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDYEVVIVTAAGSSMQDIRTVPLYELDRSVGINNLTSVYVPPVKDEEILHQEFSMFRSVI
CCCEEEEEEECCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
RKLRGPDGCPWDRKQTHESLKKYLIEECYEVLEAIDEEDPDHLVEELGDVMLQVLLHAQI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GEDDGLFTIDDVIRGITAKMIRRHPHVFGEVSVRDEADVMVNWEEIKKQEKQADDKSLLD
CCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECHHHHHHHHHCCCHHHHHH
DIPKPLPALSKANKLQKKAAKTGFDWSNVQDIWDKVQEEMKEFSSEISEAEQHSKKMKEE
HCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDLLFALVNIGRFYKIEPEEALAMTNAKFYRRFTYIEQSAKRMGKDLESMTLEEMDELW
HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NEAKGIERS
HHHCCCCCC
>Mature Secondary Structure 
AGKITVVGLGAGDMNQLTLGVYKRLTQAEVLYVRTKDHPLIEDLKKEIAEIHFFDEVYE
CCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
KHDQFEDVYEEIVERLFEEAKQGDVLYAVPGHPFVAEKTVQLLLERRGAHQADVVVEGGH
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC
SFIDATLNALQIDPIDGFQFVDAVRFSADEVELRHHLIICQVYDQMTASEVKLTLMEKLP
HHHHHHHHHEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDYEVVIVTAAGSSMQDIRTVPLYELDRSVGINNLTSVYVPPVKDEEILHQEFSMFRSVI
CCCEEEEEEECCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
RKLRGPDGCPWDRKQTHESLKKYLIEECYEVLEAIDEEDPDHLVEELGDVMLQVLLHAQI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GEDDGLFTIDDVIRGITAKMIRRHPHVFGEVSVRDEADVMVNWEEIKKQEKQADDKSLLD
CCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECHHHHHHHHHCCCHHHHHH
DIPKPLPALSKANKLQKKAAKTGFDWSNVQDIWDKVQEEMKEFSSEISEAEQHSKKMKEE
HCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDLLFALVNIGRFYKIEPEEALAMTNAKFYRRFTYIEQSAKRMGKDLESMTLEEMDELW
HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NEAKGIERS
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]