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The map label for this gene is yabE [H]

Identifier: 52783897

GI number: 52783897

Start: 52872

End: 54197

Strand: Direct

Name: yabE [H]

Synonym: BLi00053

Alternate gene names: 52783897

Gene position: 52872-54197 (Clockwise)

Preceding gene: 52783896

Following gene: 52783898

Centisome position: 1.25

GC content: 44.12

Gene sequence:

>1326_bases
ATGAGGTGGTTTTCCCATAATAAAAGAGATGGCGGGCTTGCGGAGAAAATAGAGAGGAGGGTTGACAGGCTTGTAGATAC
TCTATATAATCTCCCCGAGGAGAAGGAGGCGTTTTTCATCATACAAAAAATGAAAAAGCTGTTTTCCGTAAAGCTTAGCA
AAAGCAGATGGATTCTGATTGCTGCTGGACTGCTTGTCGCAGGGAGCGGAACTGCTTACGGAGCACATGAGCTCGCTAAA
CAGCAAGTCACCATTTCGATAAACGGGAAAAAGCAGGATGTTCGCACGAATGCTAAAACCGTAGGTGAACTGCTGAAAAG
CTTAGACATCGAGACGAGGAAAGAAGATCACATCTCTCCCGCTGAAGATACAAAATTAACGGCGAACATGAATGTTGAAT
ATGTTGCCGCAAAACCTGTTCATTTCACGGTCGACGGACAGGAAAAGGAAATCTGGACAACAGCGGGTACAGTCGGCAAA
CTTCTGAAAGACTTAAATTTAGAGTTGGCGGAACACGATCAAATTGACCCCTCAGTTGATAAAGAAATAACGAAAGATAT
GAAGCTGACTTTGCAAAGGGCTTTTAAAGTAACCGTAAAGGATGCCGGTAAAGATAAAGACCTATGGACGACTTCGACTA
CGGTCGCTGACTTTTTAAAACATCATAAGATCAGCATAAAAGGCGATGATGAAGTTAAGCCTGCGCTTGATAAAAAGCTG
ACGAAAGATCAGGCGATTCACATTACTCGTATCAAAAAAGTCACCGATGTAGTGGAAGAGAACATCCCTTTTGAAGTCCG
GAAAAAAGAGGACGATTCACTTGAAAAGGGGAAAGAAAAAGTTGTACAGGACGGTAAACATGGCAAGCTTAAAAAGCACT
ATGCCGTTGTTATGAAAAACGGCAAGGAAGTTTCCAGAGAACTGATTAAAGAGGAAACGGCAGCCGAAAGCAAAGCCAAA
ATCATCGCTGTCGGTACAAAGCAAGCCGCAGTGGCTAAAGTCAGCGCGAATGTATCGCGCGGAAATCAATCCTCAGGAAA
GGAATTTTATGTATCCTCTACAGCTTATACAGCAAGCTGCAACGGATGCTCAGGCCACACTGCGACCGGCGTTAATTTGA
AAAATAATCCCGGCGCTAAAGTGATCGCTGTCGATCCGAGCGTTATTCCGCTGGGTTCCAAAGTACATGTAGAAGGATAT
GGCTATGCGGTTGCGGCCGATACAGGCTCAGCCATCAAAGGCCGAAAAATCGATGTATTCTTTCCGAATAAGTCTACAGC
TTACCGCTGGGGAAACAAAAGAGTTAAAATCAAGGTGTTGAACTAA

Upstream 100 bases:

>100_bases
GCCTTGTTCAAGCTTGTCTCTTCGGGGGATGGTTCTAAAAAGTTCTACATGTCTGTTTACGCTCATAGGATATCTTTGTC
GACAAGTCTTTCTTTCTTTT

Downstream 100 bases:

>100_bases
ATATCATTTATTATGCTTTTTATATAAGCAGAGGGATTTTGCGCCCTCTGTTTTTTTGGTTATAATAGATCCATCTTGTT
TTCTAATAAATTAGACGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MRWFSHNKRDGGLAEKIERRVDRLVDTLYNLPEEKEAFFIIQKMKKLFSVKLSKSRWILIAAGLLVAGSGTAYGAHELAK
QQVTISINGKKQDVRTNAKTVGELLKSLDIETRKEDHISPAEDTKLTANMNVEYVAAKPVHFTVDGQEKEIWTTAGTVGK
LLKDLNLELAEHDQIDPSVDKEITKDMKLTLQRAFKVTVKDAGKDKDLWTTSTTVADFLKHHKISIKGDDEVKPALDKKL
TKDQAIHITRIKKVTDVVEENIPFEVRKKEDDSLEKGKEKVVQDGKHGKLKKHYAVVMKNGKEVSRELIKEETAAESKAK
IIAVGTKQAAVAKVSANVSRGNQSSGKEFYVSSTAYTASCNGCSGHTATGVNLKNNPGAKVIAVDPSVIPLGSKVHVEGY
GYAVAADTGSAIKGRKIDVFFPNKSTAYRWGNKRVKIKVLN

Sequences:

>Translated_441_residues
MRWFSHNKRDGGLAEKIERRVDRLVDTLYNLPEEKEAFFIIQKMKKLFSVKLSKSRWILIAAGLLVAGSGTAYGAHELAK
QQVTISINGKKQDVRTNAKTVGELLKSLDIETRKEDHISPAEDTKLTANMNVEYVAAKPVHFTVDGQEKEIWTTAGTVGK
LLKDLNLELAEHDQIDPSVDKEITKDMKLTLQRAFKVTVKDAGKDKDLWTTSTTVADFLKHHKISIKGDDEVKPALDKKL
TKDQAIHITRIKKVTDVVEENIPFEVRKKEDDSLEKGKEKVVQDGKHGKLKKHYAVVMKNGKEVSRELIKEETAAESKAK
IIAVGTKQAAVAKVSANVSRGNQSSGKEFYVSSTAYTASCNGCSGHTATGVNLKNNPGAKVIAVDPSVIPLGSKVHVEGY
GYAVAADTGSAIKGRKIDVFFPNKSTAYRWGNKRVKIKVLN
>Mature_441_residues
MRWFSHNKRDGGLAEKIERRVDRLVDTLYNLPEEKEAFFIIQKMKKLFSVKLSKSRWILIAAGLLVAGSGTAYGAHELAK
QQVTISINGKKQDVRTNAKTVGELLKSLDIETRKEDHISPAEDTKLTANMNVEYVAAKPVHFTVDGQEKEIWTTAGTVGK
LLKDLNLELAEHDQIDPSVDKEITKDMKLTLQRAFKVTVKDAGKDKDLWTTSTTVADFLKHHKISIKGDDEVKPALDKKL
TKDQAIHITRIKKVTDVVEENIPFEVRKKEDDSLEKGKEKVVQDGKHGKLKKHYAVVMKNGKEVSRELIKEETAAESKAK
IIAVGTKQAAVAKVSANVSRGNQSSGKEFYVSSTAYTASCNGCSGHTATGVNLKNNPGAKVIAVDPSVIPLGSKVHVEGY
GYAVAADTGSAIKGRKIDVFFPNKSTAYRWGNKRVKIKVLN

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 48688; Mature: 48688

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWFSHNKRDGGLAEKIERRVDRLVDTLYNLPEEKEAFFIIQKMKKLFSVKLSKSRWILI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEE
AAGLLVAGSGTAYGAHELAKQQVTISINGKKQDVRTNAKTVGELLKSLDIETRKEDHISP
EEEEEEECCCCCCCHHHHCCEEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCHHCCCCC
AEDTKLTANMNVEYVAAKPVHFTVDGQEKEIWTTAGTVGKLLKDLNLELAEHDQIDPSVD
CCCCEEEECCCEEEEEECCEEEEECCCCCEEEEHHHHHHHHHHHCCCEECCCCCCCCCHH
KEITKDMKLTLQRAFKVTVKDAGKDKDLWTTSTTVADFLKHHKISIKGDDEVKPALDKKL
HHHHHHHHHHHHHHHEEEEECCCCCCCCEECHHHHHHHHHHCEEEECCCCCCCHHHHHHC
TKDQAIHITRIKKVTDVVEENIPFEVRKKEDDSLEKGKEKVVQDGKHGKLKKHYAVVMKN
CCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHEEEEEECC
GKEVSRELIKEETAAESKAKIIAVGTKQAAVAKVSANVSRGNQSSGKEFYVSSTAYTASC
CHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEC
NGCSGHTATGVNLKNNPGAKVIAVDPSVIPLGSKVHVEGYGYAVAADTGSAIKGRKIDVF
CCCCCCCEECCEECCCCCCEEEEECCCEEECCCEEEEECCCEEEEECCCCCCCCCEEEEE
FPNKSTAYRWGNKRVKIKVLN
ECCCCCEEEECCEEEEEEEEC
>Mature Secondary Structure
MRWFSHNKRDGGLAEKIERRVDRLVDTLYNLPEEKEAFFIIQKMKKLFSVKLSKSRWILI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEE
AAGLLVAGSGTAYGAHELAKQQVTISINGKKQDVRTNAKTVGELLKSLDIETRKEDHISP
EEEEEEECCCCCCCHHHHCCEEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCHHCCCCC
AEDTKLTANMNVEYVAAKPVHFTVDGQEKEIWTTAGTVGKLLKDLNLELAEHDQIDPSVD
CCCCEEEECCCEEEEEECCEEEEECCCCCEEEEHHHHHHHHHHHCCCEECCCCCCCCCHH
KEITKDMKLTLQRAFKVTVKDAGKDKDLWTTSTTVADFLKHHKISIKGDDEVKPALDKKL
HHHHHHHHHHHHHHHEEEEECCCCCCCCEECHHHHHHHHHHCEEEECCCCCCCHHHHHHC
TKDQAIHITRIKKVTDVVEENIPFEVRKKEDDSLEKGKEKVVQDGKHGKLKKHYAVVMKN
CCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHEEEEEECC
GKEVSRELIKEETAAESKAKIIAVGTKQAAVAKVSANVSRGNQSSGKEFYVSSTAYTASC
CHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEC
NGCSGHTATGVNLKNNPGAKVIAVDPSVIPLGSKVHVEGYGYAVAADTGSAIKGRKIDVF
CCCCCCCEECCEECCCCCCEEEEECCCEEECCCEEEEECCCEEEEECCCCCCCCCEEEEE
FPNKSTAYRWGNKRVKIKVLN
ECCCCCEEEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]