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The map label for this gene is yycI [H]

Identifier: 52145271

GI number: 52145271

Start: 5275324

End: 5276166

Strand: Reverse

Name: yycI [H]

Synonym: BCZK5160

Alternate gene names: 52145271

Gene position: 5276166-5275324 (Counterclockwise)

Preceding gene: 52145272

Following gene: 52145270

Centisome position: 99.53

GC content: 32.86

Gene sequence:

>843_bases
ATGGATTGGGATCGGATTAAAACCATATTTATTGTGACCTTTTTTGTTTTGGACCTCTTTCTCATCTTTCAATTCATTCA
AAAGCAAGATAGTAATCAATTGGAGCTTATTGCAGAAACAAAGATAGATCAAGAATTAAAAGCAAACAAAATTACTATGG
ATAATTTCCCTAAAGAACCGAAAAAAGAGTCATTTATTAGGGCTGAAAACAAGGCATTTAAAGAAGAAGATGTACAGTCT
TTAAAAAATCAAACGGCGCATATACAAAATATGTACAAGATAGAAAGTAAGCTAAAAGAGCCCTTTTTAAATACAAAATC
GTTATCAAAAGATAAGTATAATGATTTTTTGAAGAACTATGTATTGGATGGACAAAAGTATGAGTTTGGAGCGATGAAAG
ACTCTAAAATTTACTTCTTCCAAAAATATAAAGATAAGCCTATTTTCTATAACGATCAGGCGATGATTGTTGTGGAATTA
AATGAGAAAAATGAACTTGTGTCGTACACGCAGACGATGCTAACAGATTTAAAAGAAATGGGCGAAAGTGAAAAAACGAA
ACAGCAAGAAATTATTACTGCTCAAACGGCTTTAGAAAATCTGTATTTAAAAAATAAAATTCATGGGAATACACATGTAA
AAGAAGCGCAAATTGGTTATGCCAACCTTACCGCATCTACTTCTAATAACCAAGTACTTGCTCCAACGTGGAACTTAAAG
ACGGAGCAGAAGCAGGACTTCTTTGTAAATGCAATTGAAGGACAAGTTATGGAATTAGGCGAAAAGGAAAATCAAGTGGT
TGATGAACATACTGGAGTGAGAAAGAATGGGGTTGCATTTTAG

Upstream 100 bases:

>100_bases
GACGGACAAGTAGCGCGACTACAGCCAATTTGGTATGTAAAGCTTGTTGAAGATGAAGCTGGCAAACAAAAAATATATGA
GTGGAGTGAGGGAGGACTAA

Downstream 100 bases:

>100_bases
CGTACTTGCAAGTGGAAGTACAGGAAATATGCTATACGTAGGAACAGATGAAAAAAAATTACTCGTCGATGCAGGTTTAA
GCGGTAAAGCAACTGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMDNFPKEPKKESFIRAENKAFKEEDVQS
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQKYKDKPIFYNDQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLAPTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF

Sequences:

>Translated_280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMDNFPKEPKKESFIRAENKAFKEEDVQS
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQKYKDKPIFYNDQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLAPTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
>Mature_280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMDNFPKEPKKESFIRAENKAFKEEDVQS
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQKYKDKPIFYNDQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLAPTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 32707; Mature: 32707

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMDNFPKEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCC
KKESFIRAENKAFKEEDVQSLKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
VLDGQKYEFGAMKDSKIYFFQKYKDKPIFYNDQAMIVVELNEKNELVSYTQTMLTDLKEM
HCCCCCEECCCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHH
GESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLAPTWNLK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMDNFPKEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCC
KKESFIRAENKAFKEEDVQSLKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
VLDGQKYEFGAMKDSKIYFFQKYKDKPIFYNDQAMIVVELNEKNELVSYTQTMLTDLKEM
HCCCCCEECCCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHH
GESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLAPTWNLK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]