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The map label for this gene is yycH [H]

Identifier: 52145272

GI number: 52145272

Start: 5276147

End: 5277463

Strand: Reverse

Name: yycH [H]

Synonym: BCZK5161

Alternate gene names: 52145272

Gene position: 5277463-5276147 (Counterclockwise)

Preceding gene: 52145273

Following gene: 52145271

Centisome position: 99.56

GC content: 33.56

Gene sequence:

>1317_bases
ATGAGTATGGAAAATGTTAAAACGATAGTTTTAATTAATTTAGTTGTAATTAGTTTATTTCTTACTTTTAACTTATGGAC
GTATGTGCCAGATTCCACATCTATGCAAAATGCAAAATTTGTACAGGGGAATGAAGGAACTACGCAAACTAAAATCGCTG
ATGTTGTCCGCCCTACTTCTATCATCGTGCATAAAGATAAAAATCATTACGGGAGCAAAAGAGAGGGAGATATAGAATCA
ATCTATAAAACTTTGGAAGCAGGGGAATTACATACTTTCAAAGAGATATCGATTGCTAAGGCTGACTTCCTTTCTTATGT
GCATGGTGAAGGGAAAATTGAACTTCTTTTCCCTACCAACATCCCATTTGATGCAGTTAAATCTATGTTTAGTATGAAAG
AAAAAAGTATAGATAAGCCTAAACACTTTAATCGAATTATTCTTGATCCTTCTAGAAGTAGGGATCAGGAAATTAAAATT
AATTTTGTTTCTGATGGTGATAATTCTAGAATATATGAAGCAAAATTAAGTGGTGTGTATTTAAAAGATATTGTAAATGC
ACAAAATCAATTTATAGTATCCGCGAAACCTTATTTTGACTATCAAATTAATGATATGAAAAAGCTATTTTTACCAGATG
GAACGACAGAACTAAGTAATATAACATATATTTCATCTAATTTAGCGGTTGATACATTTAAGAATGCCCTTTTTAGTGAC
CCACGTTATTTAAGCCCTATTATCGAGCCAACGAAAGAAATATTTACAGACGGTATTAGGTCTATGGAGATTGAAAACAA
TCAGCATATGCTAAAGTATAAAAATTCTTCTGTTTCAAGCGAGAAAACGACAGATAATTTAATGCTTTTACAAAAAAGCT
TTGATTTTGTAAATGGTCATAGTGGAAGTCTGGATTCATACCGTTTGGACTATATGAATAAAGGACAGACAGTATTCCGC
TTACAGGAAGATGGATATCCTGTATTCAATACAGATGGATTAGCTGAATTGAAACAAGTATGGGGATCAGAAGAAGTAAT
GAAATACGAAAGACCGTTGTTGTCTTTAAATACGAAAGGTATTGAACAGAAGGTTACTCTCCCATCAGGACACGTTGTGA
TAGCATCCTTAGAAAATAATGCCGCGGTAGATAAAAGATTCATTAAAGACATTGGTATTGGATACAAATTAGCACTAGAC
GGACAAGTAGCGCGACTACAGCCAATTTGGTATGTAAAGCTTGTTGAAGATGAAGCTGGCAAACAAAAAATATATGAGTG
GAGTGAGGGAGGACTAAATGGATTGGGATCGGATTAA

Upstream 100 bases:

>100_bases
AGGCACATGGTGGCTCGATTTGGGCGAAGAGTGAGGAAGGAAAAGGGACAACGATTTATTTCACATTGCCAATGGCAGCG
GATGAAGAGGACGATTGGGA

Downstream 100 bases:

>100_bases
AACCATATTTATTGTGACCTTTTTTGTTTTGGACCTCTTTCTCATCTTTCAATTCATTCAAAAGCAAGATAGTAATCAAT
TGGAGCTTATTGCAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIES
IYKTLEAGELHTFKEISIAKADFLSYVHGEGKIELLFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKI
NFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
PRYLSPIIEPTKEIFTDGIRSMEIENNQHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFR
LQEDGYPVFNTDGLAELKQVWGSEEVMKYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLALD
GQVARLQPIWYVKLVEDEAGKQKIYEWSEGGLNGLGSD

Sequences:

>Translated_438_residues
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIES
IYKTLEAGELHTFKEISIAKADFLSYVHGEGKIELLFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKI
NFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
PRYLSPIIEPTKEIFTDGIRSMEIENNQHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFR
LQEDGYPVFNTDGLAELKQVWGSEEVMKYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLALD
GQVARLQPIWYVKLVEDEAGKQKIYEWSEGGLNGLGSD
>Mature_437_residues
SMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTSIIVHKDKNHYGSKREGDIESI
YKTLEAGELHTFKEISIAKADFLSYVHGEGKIELLFPTNIPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKIN
FVSDGDNSRIYEAKLSGVYLKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSDP
RYLSPIIEPTKEIFTDGIRSMEIENNQHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVFRL
QEDGYPVFNTDGLAELKQVWGSEEVMKYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLALDG
QVARLQPIWYVKLVEDEAGKQKIYEWSEGGLNGLGSD

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 49605; Mature: 49474

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTS
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE
IIVHKDKNHYGSKREGDIESIYKTLEAGELHTFKEISIAKADFLSYVHGEGKIELLFPTN
EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
IPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSGVY
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCH
LKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
HHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCC
PRYLSPIIEPTKEIFTDGIRSMEIENNQHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGH
CHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCCCC
SGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELKQVWGSEEVMKYERPLLSLNTKG
CCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHCCEEEECCCC
IEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLALDGQVARLQPIWYVKLVEDEAG
CCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEEECCEEEEEEECCCCC
KQKIYEWSEGGLNGLGSD
CHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGTTQTKIADVVRPTS
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE
IIVHKDKNHYGSKREGDIESIYKTLEAGELHTFKEISIAKADFLSYVHGEGKIELLFPTN
EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
IPFDAVKSMFSMKEKSIDKPKHFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSGVY
CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCH
LKDIVNAQNQFIVSAKPYFDYQINDMKKLFLPDGTTELSNITYISSNLAVDTFKNALFSD
HHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCC
PRYLSPIIEPTKEIFTDGIRSMEIENNQHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGH
CHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCCCC
SGSLDSYRLDYMNKGQTVFRLQEDGYPVFNTDGLAELKQVWGSEEVMKYERPLLSLNTKG
CCCCCCEEECCCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCHHHHHHHCCEEEECCCC
IEQKVTLPSGHVVIASLENNAAVDKRFIKDIGIGYKLALDGQVARLQPIWYVKLVEDEAG
CCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEEECCEEEEEEECCCCC
KQKIYEWSEGGLNGLGSD
CHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]