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The map label for this gene is secY [H]

Identifier: 52142771

GI number: 52142771

Start: 2604622

End: 2605926

Strand: Direct

Name: secY [H]

Synonym: BCZK2469

Alternate gene names: 52142771

Gene position: 2604622-2605926 (Clockwise)

Preceding gene: 52142772

Following gene: 52142769

Centisome position: 49.14

GC content: 35.48

Gene sequence:

>1305_bases
ATGTTTCGTACGATTTCAAATTTCATGAGAGTAGCTGAGATAAGAAGGAAAATCCTTTTTACATTAGCGATGTTAATCGT
TTTTCGAATTGGCACGTTTATTCCAGTTCCTCATACTAACGCAGAGGTATTAAAAGTACAAGATCAAGCTAACGTTTTAG
GTATGCTAAACGTATTTGGCGGAGGAGCATTGCAACACTTCTCAATCTTTGCTGTAGGTATTACACCATATATTACAGCT
TCCATTATAGTACAATTACTACAAATGGACGTCATACCAAAATTTTCGGAATGGGCAAAGCAAGGAGAAATGGGCCGTAA
GAAATCAGCTCAATTTACTCGATACTTTACAATCATTCTCGCATTCATACAAGCCATTGGGATGTCTTATGGCTTTAATA
ATATAGCAGGTGGACAATTAATAACAGATCCAAGCTGGACTACATACTTATTTATTGCGACAGTTTTAACTGCAGGTACT
GCATTTTTACTTTGGTTAGGCGAACAAATTACCGCTAATGGAGTAGGTAATGGTATTTCAATGATTATCTTCGCAGGACT
TGTAGCAGCGATTCCAAATGTTGCGAATCAAATTTATTTACAACAATTTCAAAATGCAGGCGATCAATTATTCATGCACA
TCATAAAAATGGTTTTAATTGGTCTCGTAATTTTAGCGATTGTTGTTGGCGTTATCTACATACAACAAGCCGTACGTAAA
ATTCCAATTCAATATGCAAAAGCTGTTTCAGGAAACAATCAATATCAAGGAGCAAAAAATACTCATTTACCTCTTAAAGT
AAATAGTGCTGGTGTAATTCCAGTCATCTTTGCTTCCGCATTTTTAATGACGCCGCGTACAATTGCACAGCTCTTCCCTG
ATTCAAGCGTATCAAAATGGTTAGTTGCAAATCTTGATTTCGCACATCCAATTGGAATGACACTATATGTAGGTCTTATC
GTTGCTTTTACATACTTCTATGCATTTATTCAAGTGAATCCTGAACAAATGGCAGAGAATTTGAAAAAGCAAAATGGATA
TGTACCTGGTATTCGTCCTGGTAAATCAACAGAACAATATGTAACGAAAATTTTATACCGTTTAACATTTATCGGTGCAA
TTTTCTTAGGTGCAATTTCAATTTTACCGCTTGTATTCACAAAGATTGCTACATTACCACCTTCTGCACAAATTGGTGGT
ACAAGCTTACTGATCATTGTCGGTGTGGCACTTGAAACAATGAAAACGTTAGAAAGTCAGCTTGTAAAACGTCATTATAA
AGGGTTTATAAAAAAAGCGAATTAA

Upstream 100 bases:

>100_bases
TCCATTTGTCAAATGAATTTAATGCGGAAGGAGGTTTGTGGTTACTTCATCGGGATATAATAATCAGTTTTAAACTGATA
AAAATATAGGAGGCGATATA

Downstream 100 bases:

>100_bases
ATAAAAAAACACAGTTGGTTATTTTTCCAACTGTGTTTTTAATTCTACTGCATCTAATTTTTCTACTAATGTACCAATGA
CCTTTTCCAAGTTCATTATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPHTNAEVLKVQDQANVLGMLNVFGGGALQHFSIFAVGITPYITA
SIIVQLLQMDVIPKFSEWAKQGEMGRKKSAQFTRYFTIILAFIQAIGMSYGFNNIAGGQLITDPSWTTYLFIATVLTAGT
AFLLWLGEQITANGVGNGISMIIFAGLVAAIPNVANQIYLQQFQNAGDQLFMHIIKMVLIGLVILAIVVGVIYIQQAVRK
IPIQYAKAVSGNNQYQGAKNTHLPLKVNSAGVIPVIFASAFLMTPRTIAQLFPDSSVSKWLVANLDFAHPIGMTLYVGLI
VAFTYFYAFIQVNPEQMAENLKKQNGYVPGIRPGKSTEQYVTKILYRLTFIGAIFLGAISILPLVFTKIATLPPSAQIGG
TSLLIIVGVALETMKTLESQLVKRHYKGFIKKAN

Sequences:

>Translated_434_residues
MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPHTNAEVLKVQDQANVLGMLNVFGGGALQHFSIFAVGITPYITA
SIIVQLLQMDVIPKFSEWAKQGEMGRKKSAQFTRYFTIILAFIQAIGMSYGFNNIAGGQLITDPSWTTYLFIATVLTAGT
AFLLWLGEQITANGVGNGISMIIFAGLVAAIPNVANQIYLQQFQNAGDQLFMHIIKMVLIGLVILAIVVGVIYIQQAVRK
IPIQYAKAVSGNNQYQGAKNTHLPLKVNSAGVIPVIFASAFLMTPRTIAQLFPDSSVSKWLVANLDFAHPIGMTLYVGLI
VAFTYFYAFIQVNPEQMAENLKKQNGYVPGIRPGKSTEQYVTKILYRLTFIGAIFLGAISILPLVFTKIATLPPSAQIGG
TSLLIIVGVALETMKTLESQLVKRHYKGFIKKAN
>Mature_434_residues
MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPHTNAEVLKVQDQANVLGMLNVFGGGALQHFSIFAVGITPYITA
SIIVQLLQMDVIPKFSEWAKQGEMGRKKSAQFTRYFTIILAFIQAIGMSYGFNNIAGGQLITDPSWTTYLFIATVLTAGT
AFLLWLGEQITANGVGNGISMIIFAGLVAAIPNVANQIYLQQFQNAGDQLFMHIIKMVLIGLVILAIVVGVIYIQQAVRK
IPIQYAKAVSGNNQYQGAKNTHLPLKVNSAGVIPVIFASAFLMTPRTIAQLFPDSSVSKWLVANLDFAHPIGMTLYVGLI
VAFTYFYAFIQVNPEQMAENLKKQNGYVPGIRPGKSTEQYVTKILYRLTFIGAIFLGAISILPLVFTKIATLPPSAQIGG
TSLLIIVGVALETMKTLESQLVKRHYKGFIKKAN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=431, Percent_Identity=42.2273781902552, Blast_Score=294, Evalue=6e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47694; Mature: 47694

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1435726 [H]