Click here to switch to the map view.

The map label for this gene is salR [H]

Identifier: 52142347

GI number: 52142347

Start: 3024476

End: 3025054

Strand: Direct

Name: salR [H]

Synonym: BCZK2895

Alternate gene names: 52142347

Gene position: 3024476-3025054 (Clockwise)

Preceding gene: 52142348

Following gene: 52142334

Centisome position: 57.06

GC content: 28.67

Gene sequence:

>579_bases
TTGTTTGCAAAAAGCTTGGAAATAGCCTTAGAAGATTATCCTGAAATAGATGAATTCCGTTCATTACAGAATGTTGAAAA
TGTCGTTACAATTATCAATCAGTTTAAACCAGATATTATCTTATTAGATATTAATTTAAGCAATATAAGTAGTGAAGATG
GTTTAGAAATAGCAAAAATAATTTTGGATAGTAAATGTAATACAAAAATTGTTATATTAACCGGTTATGATTTACCTGTT
TACCAGTATGAAGCTCAAAAACTAGGTGTAAGTGGTTTTATTAATAAAAATATTTTACCTGAAATATTGGTGAAAGTATT
ACATGACATTAATAAAGGCGCATCTCATTTTCCAACCCCTACAGAAACAATTGAAGAATTGACTCATACTGAAAAACAAA
TTTTACAATTACTATGTGATGGCTATAAGCGCAAAGAAATTGCTTCTATGTTATACGCTAGCGAACGTACAATTTCCAAT
CATATTCAGCACGTATTTGATAAATTAAATGTTTCATCTTCTTTAGAAGCTGTCACGAAAGGGATAAAATTAGGTTATAT
TCAGCCTACTTATCATTAA

Upstream 100 bases:

>100_bases
ACCATTTCAAATAGTAACCCTTCTGGTTTATGCATTACTATTATCATTCCTATGAAAGGAGACGATTCCTATAAACATTT
TATTAATAGATGATCATGCT

Downstream 100 bases:

>100_bases
AGAGCCTACTCAAACAAGTTGGCTCTTTCTTCTCTACTTATTAATGAAGACAACCTTTCTCCCCTCACTCTATAAACTTC
CAAATGTTCTTCTAATTTCC

Product: response regulator of salavaricin regulon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MFAKSLEIALEDYPEIDEFRSLQNVENVVTIINQFKPDIILLDINLSNISSEDGLEIAKIILDSKCNTKIVILTGYDLPV
YQYEAQKLGVSGFINKNILPEILVKVLHDINKGASHFPTPTETIEELTHTEKQILQLLCDGYKRKEIASMLYASERTISN
HIQHVFDKLNVSSSLEAVTKGIKLGYIQPTYH

Sequences:

>Translated_192_residues
MFAKSLEIALEDYPEIDEFRSLQNVENVVTIINQFKPDIILLDINLSNISSEDGLEIAKIILDSKCNTKIVILTGYDLPV
YQYEAQKLGVSGFINKNILPEILVKVLHDINKGASHFPTPTETIEELTHTEKQILQLLCDGYKRKEIASMLYASERTISN
HIQHVFDKLNVSSSLEAVTKGIKLGYIQPTYH
>Mature_192_residues
MFAKSLEIALEDYPEIDEFRSLQNVENVVTIINQFKPDIILLDINLSNISSEDGLEIAKIILDSKCNTKIVILTGYDLPV
YQYEAQKLGVSGFINKNILPEILVKVLHDINKGASHFPTPTETIEELTHTEKQILQLLCDGYKRKEIASMLYASERTISN
HIQHVFDKLNVSSSLEAVTKGIKLGYIQPTYH

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=165, Percent_Identity=27.8787878787879, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAKSLEIALEDYPEIDEFRSLQNVENVVTIINQFKPDIILLDINLSNISSEDGLEIAKI
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
ILDSKCNTKIVILTGYDLPVYQYEAQKLGVSGFINKNILPEILVKVLHDINKGASHFPTP
HHCCCCCCEEEEEECCCCCCEEHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TETIEELTHTEKQILQLLCDGYKRKEIASMLYASERTISNHIQHVFDKLNVSSSLEAVTK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GIKLGYIQPTYH
CCEECCCCCCCC
>Mature Secondary Structure
MFAKSLEIALEDYPEIDEFRSLQNVENVVTIINQFKPDIILLDINLSNISSEDGLEIAKI
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
ILDSKCNTKIVILTGYDLPVYQYEAQKLGVSGFINKNILPEILVKVLHDINKGASHFPTP
HHCCCCCCEEEEEECCCCCCEEHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TETIEELTHTEKQILQLLCDGYKRKEIASMLYASERTISNHIQHVFDKLNVSSSLEAVTK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GIKLGYIQPTYH
CCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]