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The map label for this gene is yocH [H]

Identifier: 52141775

GI number: 52141775

Start: 3599345

End: 3600280

Strand: Reverse

Name: yocH [H]

Synonym: BCZK3475

Alternate gene names: 52141775

Gene position: 3600280-3599345 (Counterclockwise)

Preceding gene: 52141771

Following gene: 52141773

Centisome position: 67.92

GC content: 38.35

Gene sequence:

>936_bases
ATGAAAAAATTATTAGGTATAGCAACGGCGGCAGTTTTTGGTCTTGGGATTTTTGCAGGTTCTGCGCAAGCGGAAACGAT
TGTAACAACAGACGTATTAAATGTTAGAGAAAACCCAACTGTAGAGTCAAAGCTTGTAGGTAAAATGTTAAGTGGAAATA
AATTAGATGTTATAAATACAGAAAATGGATGGACAAAAATTAAAGTAAATGGTAAAGAAGCGTTTGTAAGTGCTGAATTT
ACAAAAAGTACATATTATGTAACGGCGGGCGTGTTAAATGTTCGTGCCGGAGCGAATACTGATTCTGAAATCCTTGGTAA
ACTAAATAAAGATGATGTAATTGAAACGACCAATCAAGTTCAAAATGAGTGGTTACAATTTGACTACAATGGAAAAGTTG
GATATGTTCACGTGCCATTTTTAACAGGGACAGCACCTGTGGTTGAAAAGAAAGAAGTTGTAACGCAAGAAGAAGTGCCG
GTAAGAGTGAATGCACCGGTTAAAAATAATAAAGTAGTTAAGAACAAAGAGTCTGTTAAGAATGTGGAATCAAGTAAACC
TGTGGCAAAAGCAAAGCCAGCTGTGCAGCAGCAGGTTGCAAAATCTAAGGGAACAAGTACACCTGCTGGTGGACGTGAAA
TAACAGTAGAAGCGACGGCATATACAGCAGATCCGAGTGAGAATGGTTCATATGGTGGTCGTGTATTAACTGCAATGGGG
CATGATTTAACAGCTAATCCAAATATGAAAGTAATTGCTGTTGATCCTAAAGTAATTCCACTTGGATCAAAAGTATGGGT
AGAAGGATACGGAGAAGCGATTGCTGGAGATACTGGTGGTGCGATTAAAGGAAATCGTATTGATGTTTTAGTTGGCTCAG
ATGGTAGTGCTAATAGTTGGGGGCGCAAATCTGTAAAAGTGAAAGTTATAGAGTAG

Upstream 100 bases:

>100_bases
ATCGTATATTACGAATGGTTTGTAATTGTATGTTTTCTAAAAATCTTAAAAATCCGTTGCTATAATGAAAATACGAAAAC
AAAGCAAATGGAGGCTATTC

Downstream 100 bases:

>100_bases
TGTACATGTATTAATATAAAAGGCGGTTGCTTGAAAGTATGTAAGCAACCGCCTTTTATGGATTATTGAAAAGGATAAAT
CGTTTTACCTGTAATAATTT

Product: enterotoxin/cell wall-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKLLGIATAAVFGLGIFAGSAQAETIVTTDVLNVRENPTVESKLVGKMLSGNKLDVINTENGWTKIKVNGKEAFVSAEF
TKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAPVVEKKEVVTQEEVP
VRVNAPVKNNKVVKNKESVKNVESSKPVAKAKPAVQQQVAKSKGTSTPAGGREITVEATAYTADPSENGSYGGRVLTAMG
HDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSWGRKSVKVKVIE

Sequences:

>Translated_311_residues
MKKLLGIATAAVFGLGIFAGSAQAETIVTTDVLNVRENPTVESKLVGKMLSGNKLDVINTENGWTKIKVNGKEAFVSAEF
TKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAPVVEKKEVVTQEEVP
VRVNAPVKNNKVVKNKESVKNVESSKPVAKAKPAVQQQVAKSKGTSTPAGGREITVEATAYTADPSENGSYGGRVLTAMG
HDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSWGRKSVKVKVIE
>Mature_311_residues
MKKLLGIATAAVFGLGIFAGSAQAETIVTTDVLNVRENPTVESKLVGKMLSGNKLDVINTENGWTKIKVNGKEAFVSAEF
TKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAPVVEKKEVVTQEEVP
VRVNAPVKNNKVVKNKESVKNVESSKPVAKAKPAVQQQVAKSKGTSTPAGGREITVEATAYTADPSENGSYGGRVLTAMG
HDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSWGRKSVKVKVIE

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 32957; Mature: 32957

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLGIATAAVFGLGIFAGSAQAETIVTTDVLNVRENPTVESKLVGKMLSGNKLDVINT
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC
ENGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQV
CCCEEEEEECCCEEEEEEEECCCEEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHH
QNEWLQFDYNGKVGYVHVPFLTGTAPVVEKKEVVTQEEVPVRVNAPVKNNKVVKNKESVK
HHHHEEEEECCCEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCEEECCHHHHH
NVESSKPVAKAKPAVQQQVAKSKGTSTPAGGREITVEATAYTADPSENGSYGGRVLTAMG
HCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEC
HDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSW
CCEECCCCEEEEEECCEEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCCC
GRKSVKVKVIE
CCCEEEEEEEC
>Mature Secondary Structure
MKKLLGIATAAVFGLGIFAGSAQAETIVTTDVLNVRENPTVESKLVGKMLSGNKLDVINT
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC
ENGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQV
CCCEEEEEECCCEEEEEEEECCCEEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHH
QNEWLQFDYNGKVGYVHVPFLTGTAPVVEKKEVVTQEEVPVRVNAPVKNNKVVKNKESVK
HHHHEEEEECCCEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCEEECCHHHHH
NVESSKPVAKAKPAVQQQVAKSKGTSTPAGGREITVEATAYTADPSENGSYGGRVLTAMG
HCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEC
HDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSW
CCEECCCCEEEEEECCEEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCCC
GRKSVKVKVIE
CCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]