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The map label for this gene is ydaJ [H]

Identifier: 52140345

GI number: 52140345

Start: 5005047

End: 5006279

Strand: Reverse

Name: ydaJ [H]

Synonym: BCZK4915

Alternate gene names: 52140345

Gene position: 5006279-5005047 (Counterclockwise)

Preceding gene: 52140344

Following gene: 52140347

Centisome position: 94.44

GC content: 35.77

Gene sequence:

>1233_bases
ATGATCGACTCGTGGAATCGCTATATAGACCTTCTAAAGAGGCTTGTGAAGGATAGAGGAACGGGAGACAATCTAATAGA
TTGTCTTTTTTACATTTACGTATGTTCTGGTAAAATTAAGGATAGCCTTACTAGGGAGGTGAAAAGTTTGCGGAAACGTA
TATATATAGTGATTGGAGTTATTCTTTTAATCGCTTTAGGTGGAATTGTATTTTGGTCAGCTTTGCAAGGAAACCGTACG
GAACATTTTATTTTAAGACATATGGTGAATGAAAATGGGACGCTTGCGACATATCGTTTAGAAGATACAAAAGCAGGTAC
CGGTGAAGCGAAAGGCCGTGAAGCTTTATCGGAATCAGCAGGACTTTGGCTACAATATACATTGGATAAAGATGATCAAG
CGTTATTCGATGAACAAGTTAAGGTTATTCAAAATAACTTTGTACATAAGGACCAAATTGTTTTATGGAAAATCTCTGAA
AAGGGAGAAATACAATCAGCTACAAATGCACTTATTGACGATCTTCGTATTATAGAACAGTTATATCGCGCTTATGAAAT
GTACAAGGAAGAGCGTTATAAAAACTTGGCAGATCAATTGAGTGATGCTGTAATTCGTTATAATAAGAAAGATAATTATT
ATGTTGATTATTATGATGCAGATGCAAGGAAACAAAATGATTTTGCAACAACGTCATATATAAATCCGCGCGCATTCTCT
TATATGAAAAAGTATGGTAAAGTTTCTGCTCAGCAATATCAGGAAGTCGTTCAATTTTTAGCGGATTACCCAAGGCATGG
ATGGGCATTCCCGAAAGAGTATAAAGAAGATGGTACATTTACGTACGATAAAGAAGTGAATCTTATTGACCAATCATACG
TTGCATATCATCGTAGTTTAGGTGGCCTCTCATCAGATGCTTACTTGGAATTTATAAAGAAGAAGTTCCATGAGGATGGA
AAGCTATACGGTCGTTACAATTTAGAAACGGGAAAACAAACCGTGAAGTATGAATCACCAGCCGCTTACGGATTAACAAT
TTTGTACGTATTACAAACAGGTGATACGAAGTTTGCAAAGGAATTGTATGATCATATGTCCACATTCCGAAATGACAACG
TATTTAGTAGATATTACGGTGGATACGTAACAGGTGAAAATAATAATACGCATATTTTCGATAACGTACTACCGCTTTTA
GCTGAAATAGAATTAGAGAAAAGTGAACAATAG

Upstream 100 bases:

>100_bases
TGTTTTATGTATCCTGAAGTCATTAAAAAGATGGCATTTTCAAAAGAGCATAGAGATTTATTACTGAAGCTATATAATAA
AGAGATTACGCGTAGTGAGT

Downstream 100 bases:

>100_bases
AAGGTGCCATCCTATCGGGATGGCACCTTTTGTTTTTTGATATCATTTTACGCCTTAATATTGGAGAAGTAATCGATCAC
GAATTCACGGAATTGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MIDSWNRYIDLLKRLVKDRGTGDNLIDCLFYIYVCSGKIKDSLTREVKSLRKRIYIVIGVILLIALGGIVFWSALQGNRT
EHFILRHMVNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISE
KGEIQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINPRAFS
YMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAYHRSLGGLSSDAYLEFIKKKFHEDG
KLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLL
AEIELEKSEQ

Sequences:

>Translated_410_residues
MIDSWNRYIDLLKRLVKDRGTGDNLIDCLFYIYVCSGKIKDSLTREVKSLRKRIYIVIGVILLIALGGIVFWSALQGNRT
EHFILRHMVNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISE
KGEIQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINPRAFS
YMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAYHRSLGGLSSDAYLEFIKKKFHEDG
KLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLL
AEIELEKSEQ
>Mature_410_residues
MIDSWNRYIDLLKRLVKDRGTGDNLIDCLFYIYVCSGKIKDSLTREVKSLRKRIYIVIGVILLIALGGIVFWSALQGNRT
EHFILRHMVNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISE
KGEIQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINPRAFS
YMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAYHRSLGGLSSDAYLEFIKKKFHEDG
KLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLL
AEIELEKSEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47724; Mature: 47724

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSWNRYIDLLKRLVKDRGTGDNLIDCLFYIYVCSGKIKDSLTREVKSLRKRIYIVIGV
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ILLIALGGIVFWSALQGNRTEHFILRHMVNENGTLATYRLEDTKAGTGEAKGREALSESA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC
GLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEIQSATNALIDDLRIIEQ
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINPRAFS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCHHCCCCHHHHH
YMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAYHRSL
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHH
GGLSSDAYLEFIKKKFHEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAK
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCHHCEEEEEEEECCCHHHHH
ELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
HHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDSWNRYIDLLKRLVKDRGTGDNLIDCLFYIYVCSGKIKDSLTREVKSLRKRIYIVIGV
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ILLIALGGIVFWSALQGNRTEHFILRHMVNENGTLATYRLEDTKAGTGEAKGREALSESA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC
GLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEIQSATNALIDDLRIIEQ
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFATTSYINPRAFS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCHHCCCCHHHHH
YMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLIDQSYVAYHRSL
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHH
GGLSSDAYLEFIKKKFHEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAK
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCHHCEEEEEEEECCCHHHHH
ELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
HHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]