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The map label for this gene is atpH

Identifier: 52140252

GI number: 52140252

Start: 5111492

End: 5112034

Strand: Reverse

Name: atpH

Synonym: BCZK5008

Alternate gene names: 52140252

Gene position: 5112034-5111492 (Counterclockwise)

Preceding gene: 52140253

Following gene: 52140254

Centisome position: 96.44

GC content: 34.44

Gene sequence:

>543_bases
ATGAGCAATGGGATTGTAGCAAAACGTTATGCTGTCGCTCTTTTTAAAATTGCAAAAGAAAAACACGTATTAGAAATGTT
TGAAGAGGAATTACGCCTTGTACAAAACGTTTATGAGAAGAACGGAGAACTACATAGCTTTTTAACACAACCGAACATTT
CAAAAGAGCAGAAGAAGACGTTTCTTGCAAACGTATTCGGATCTGTTTCTGAATCTATTTTAAATACGTTATATATTTTA
ATTGATAACAAACGCATTGATATCTTATCTGACATTGCAAATGAATACGTAGTTCTTGCGAATGAAGAACGTAACGTAGC
GGACGCAACAGTATATTCTACTCGTCTTCTATCAGAAGAAGAGAAGCTTAACATTGCAGAAGCATTTGCAAAGAGAACAG
GAAAAGATGCAATTCGCGTAAAAAATGTTGTAGATGAAGATTTACTAGGCGGTATTAAAGTACGTATTGGAAATCGCATT
TATGACGGAAGTTTACAAGGAAAATTAGCACGTATTCAGCGTGAATTAATGAAGAATAGATAG

Upstream 100 bases:

>100_bases
TATCTGTTCAAATTGCTTCTAAAGTAATTGAAAAAGAACTAAAAGAAGAAGATCAAGTGAAGTTAATTCGCGATTATATT
AAAGAAGTAGGAGAAGCGCG

Downstream 100 bases:

>100_bases
GGGTGAAGCACATGAGCATCAGAGCTGAAGAAATTAGCGCACTGATAAAGCAACAAATCGAGAACTATCAGTCTGAAATC
GAAGTTAGTGATGTTGGTAC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSNGIVAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESILNTLYIL
IDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGNRI
YDGSLQGKLARIQRELMKNR

Sequences:

>Translated_180_residues
MSNGIVAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESILNTLYIL
IDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGNRI
YDGSLQGKLARIQRELMKNR
>Mature_179_residues
SNGIVAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESILNTLYILI
DNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGNRIY
DGSLQGKLARIQRELMKNR

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=167, Percent_Identity=25.748502994012, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BACAA (C3P1F7)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002869523.1
- ProteinModelPortal:   C3P1F7
- SMR:   C3P1F7
- EnsemblBacteria:   EBBACT00000129744
- GeneID:   7852933
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_5578
- GeneTree:   EBGT00050000001610
- ProtClustDB:   PRK05758
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20487; Mature: 20356

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGIVAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
FLANVFGSVSESILNTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEE
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCH
EKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGNRIYDGSLQGKLARIQRELMKNR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNGIVAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
FLANVFGSVSESILNTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEE
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCH
EKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGNRIYDGSLQGKLARIQRELMKNR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA