| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893921
Identifier: 51893921
GI number: 51893921
Start: 3001293
End: 3001742
Strand: Reverse
Name: 51893921
Synonym: STH2783
Alternate gene names: NA
Gene position: 3001742-3001293 (Counterclockwise)
Preceding gene: 51893922
Following gene: 51893920
Centisome position: 84.17
GC content: 68.0
Gene sequence:
>450_bases ATGGAACGGGTAAGGCTGATCACCGGCCTGACCCGCATCGCGACCACAGGCCACGGAGAGCGGGCCACGCCCGCAACCCG GGTGCCGTTTCGCGAACAGCTGGCGCGGTCGCACGCCATGCAGTTCAACGAGCGGATTGACCGCGCGCTGCAGGAGATCG ACGAGCTGGGGCGCCGGCTGACGGAGTCGCTCAGCCAGCACGACCTGCAACTTTACCGGGAGGCCATCGGCCGGCTCTTC CGCGACCTGACCCACCACATGATGGAAGTCCGGCAGAACCTGGAGTGGGATTCCTACGCCTGGGAGCAGCGGACGATGGT CACCATCCAGCGGGTGGACCAGCGGCTGGAGGAGCTCGCCCGCATGGTGCTGGAGCAGGAGCAGGACCGGCTGGCGATCC TCGCCGCGGTGGACGAGATCCGCGGGCTGCTCCTGGACGTCCGGATGTGA
Upstream 100 bases:
>100_bases AACGGCATCGTGCGCTGGGTACAGCCGGGGATGCCCGCCACCGAGACGATTCTGGCAGCCGTGGACGCGCTCGGGGAGCA GGCGTGAAAGGGGGATGCCG
Downstream 100 bases:
>100_bases GACCCTGGGCCCTTCCCCGAGCGGGAGGGGCCCTGGTTTTTTGTCCCCAACTGTATGCATATCGTAGTACAGTTGCTGGA TCCGCCGGCAGGGCCGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM
Sequences:
>Translated_149_residues MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM >Mature_149_residues MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17649; Mature: 17649
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESLSQHDLQLYREAIGRLFRDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMVLEQEQDRLAILAAVDEIRGLLLDVRM HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESLSQHDLQLYREAIGRLFRDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMVLEQEQDRLAILAAVDEIRGLLLDVRM HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA