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The map label for this gene is 51893919

Identifier: 51893919

GI number: 51893919

Start: 2999013

End: 2999681

Strand: Reverse

Name: 51893919

Synonym: STH2781

Alternate gene names: NA

Gene position: 2999681-2999013 (Counterclockwise)

Preceding gene: 51893920

Following gene: 51893918

Centisome position: 84.12

GC content: 66.67

Gene sequence:

>669_bases
ATGGGTGAAAGGCTGGCCTGGGCGCGGAACCAGCAGGGGTTGATCCTTCAGCAGGTTAGCGAGAAGAGCGGCCTCGCGGT
CGGGTACATCTCGCAACTGGAGAAGGGGGCGAAGGTCAACCCGACCATCGATGCCCTGGGGCGCCTGGCCAAGGCGCTGG
GCGTGAGCATCGCGTTCCTCCTGGGCGAGGTGCACGCGCCGCCTTATGACGACCGCGCCGCCCTGCTCATCGGTGGACAG
GCCTGGACGGTGGGGCAGCGCTTTGCCCGCTACTACGAGCAACTGTCACCGGAGGAGCGGCGCAAGATCGAGCTGGAGAC
CGTCGAGCAGCGCTTCGCCCGGGTAGTCGACTTCCTGTGCCAGGAATTCCCCGAGACCTTCACACGTCCCGTGGTCGCGT
ACCAGCTCGGCCTTTCGGTGCGGGCGCTGAACGACATCATGGAGCGCAACTGCGAGGTCGGCCCGATGGTGCTGAGCCAG
ATGGTCTCCATCACGGGCATCCCGCTCTCTTTCTACGCCCGGGGCCGCATGGAGTCGGCGCCGGTGGACATAACCCCGGC
CCAGATGATTCGATACGCCGAGGCGATCTCGATGGCGGCCGAGGCGCAGATCACGCCGGAGGAGCTCGTCCTGCTCATCC
GGGGCGCGTCGCAGGCGCACAAAGGGTGA

Upstream 100 bases:

>100_bases
AACAGTTGACTCGCAGTCTCACGTGCTGTTAAAATGAAGGTCCCAAACTCTTGATGTGGGGAGCGTGTGTGGCGAAGGGG
GGGCGACCATGCACAGTACC

Downstream 100 bases:

>100_bases
GGCCCGTCCTCCTGTGTGGAGGACAGGCCTCCGCCGACCTTGCATGAATGCAGCGCCTAAGTTGTTGTCCGTAAAGCTTA
GAAAGAGGAAGGACCGCCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MGERLAWARNQQGLILQQVSEKSGLAVGYISQLEKGAKVNPTIDALGRLAKALGVSIAFLLGEVHAPPYDDRAALLIGGQ
AWTVGQRFARYYEQLSPEERRKIELETVEQRFARVVDFLCQEFPETFTRPVVAYQLGLSVRALNDIMERNCEVGPMVLSQ
MVSITGIPLSFYARGRMESAPVDITPAQMIRYAEAISMAAEAQITPEELVLLIRGASQAHKG

Sequences:

>Translated_222_residues
MGERLAWARNQQGLILQQVSEKSGLAVGYISQLEKGAKVNPTIDALGRLAKALGVSIAFLLGEVHAPPYDDRAALLIGGQ
AWTVGQRFARYYEQLSPEERRKIELETVEQRFARVVDFLCQEFPETFTRPVVAYQLGLSVRALNDIMERNCEVGPMVLSQ
MVSITGIPLSFYARGRMESAPVDITPAQMIRYAEAISMAAEAQITPEELVLLIRGASQAHKG
>Mature_221_residues
GERLAWARNQQGLILQQVSEKSGLAVGYISQLEKGAKVNPTIDALGRLAKALGVSIAFLLGEVHAPPYDDRAALLIGGQA
WTVGQRFARYYEQLSPEERRKIELETVEQRFARVVDFLCQEFPETFTRPVVAYQLGLSVRALNDIMERNCEVGPMVLSQM
VSITGIPLSFYARGRMESAPVDITPAQMIRYAEAISMAAEAQITPEELVLLIRGASQAHKG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24521; Mature: 24389

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERLAWARNQQGLILQQVSEKSGLAVGYISQLEKGAKVNPTIDALGRLAKALGVSIAFL
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LGEVHAPPYDDRAALLIGGQAWTVGQRFARYYEQLSPEERRKIELETVEQRFARVVDFLC
HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QEFPETFTRPVVAYQLGLSVRALNDIMERNCEVGPMVLSQMVSITGIPLSFYARGRMESA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC
PVDITPAQMIRYAEAISMAAEAQITPEELVLLIRGASQAHKG
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
GERLAWARNQQGLILQQVSEKSGLAVGYISQLEKGAKVNPTIDALGRLAKALGVSIAFL
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LGEVHAPPYDDRAALLIGGQAWTVGQRFARYYEQLSPEERRKIELETVEQRFARVVDFLC
HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QEFPETFTRPVVAYQLGLSVRALNDIMERNCEVGPMVLSQMVSITGIPLSFYARGRMESA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCC
PVDITPAQMIRYAEAISMAAEAQITPEELVLLIRGASQAHKG
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA