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The map label for this gene is xylR [H]

Identifier: 51893891

GI number: 51893891

Start: 2971548

End: 2972723

Strand: Reverse

Name: xylR [H]

Synonym: STH2753

Alternate gene names: 51893891

Gene position: 2972723-2971548 (Counterclockwise)

Preceding gene: 51893892

Following gene: 51893890

Centisome position: 83.36

GC content: 71.77

Gene sequence:

>1176_bases
GTGCCCAGGCCTGCCAACGCCCGGCTCATGAAGCAGCTGAACCGACAAGCGGTGCTCTCGGCCATTCGCGACCGCGGGCC
GATCTCGCGCGTCGAGCTCGCTGCCCTGACCGGGCTGAGTCAGCCTGCGGTGACGGCCATCGTCCGCGACTTGCTGGACC
TGGGCCTGGTGGAGGAGAAGGGCCTGGGTCAATCCTCCGGCGGACGCCCCCCGATCATGCTGCTCTTCAACCCGGCCGCC
CGCTTCGTCCTCGCCGTCTGCCTCGAGGGGGAGCGGCTCTGGGGCGGGCTGGCCGACCTCAGCGGCGCTCTCCAGGTGGA
GGCGGAAGGCGTGCTCTCCCCCGACCCCCACGACCCGGCCCGGTCCGTGTGCGACTTCCTGCAGGGGCTCATCGACCGGT
CCGGCGTCGAGGCCAGCCGGCTCGCCGCCGTTGCGGTGGGAGTGCCGGGCATTGCCCACACCGAGGGTACCGTCAGCCAC
GCCCCCTCGCTGGGCTGGTGGCAGGAGGTGCCCCTCCGTGACAGGCTGCGGCAGTGTTTCGGGGTGCCGGTCGTGGTGGA
GAACGACGTGAACCTCATGGCCCTGGGCGAGTACTTCCAGGGGGCCGGCGTGGGCGTGGCCAACCTGGCCCTGATGCACG
TGAGCGAAGGCATCGGCGCCGGCATCCTCATCGACGGCAACCTCTTCCGCGGCGCCCGCAACGCCGCGGGCGAGGTGGGC
TACCTGCCGTTGGGCCCGCTGAGCCCCCGCAGACCGCAGGATTTCGGCCTCTTCGAGCTCCACTACTCGTCCCGCGCGAT
TCGGCAGCAGCTGCAAGCCGCGTTGCCTGAGGCTCCGGGGGACGACGGGCGACCCGTCCGGCGGCTCCGGGAGCTGGCCG
AGGCGGGCCTGCCCTGGGCCCGGTCGCTTTTCGGGGATGCCCTGCGCCACTGGGCGCATGCCGTGGCCAGCATCACCTGC
ATCCTCAACCCGGAGCTGGTGCTCCTCGCGGGTGACGCGGTGGACTGCGGCCGGGAGGGGCTGTCGGAAGTCAACCGGAT
CGTGGCCGACCTGGTCCCCGATCCGCCCGAGATCCGATTCGCGGTACTGGGCAGCCGCGCCGCCCTCACCGGCGCGGTCG
CCATGGCCCTCAGTCTGGCCGACGAAAACGCCTACGGGATCGAAGCAGACCAGTGA

Upstream 100 bases:

>100_bases
TATCCTGTGTTCGGGAGGAGTTTTGCCAGCAGCGCGGCGAACTCATCCACATACTTTCTTAAGCGAATTTAGTAAGTTGG
GGTGCATGGGAGGGGTGGCC

Downstream 100 bases:

>100_bases
ACAGGGAAGGGGAGTCTGGCATGGGCGAGGCGCAGTCCGTCACCCTGGAGCGCGTGTCGAAGAGCTTCAACGGCACCGTG
CTCACGGTGAAAAATGTCGA

Product: transcriptional repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPRPANARLMKQLNRQAVLSAIRDRGPISRVELAALTGLSQPAVTAIVRDLLDLGLVEEKGLGQSSGGRPPIMLLFNPAA
RFVLAVCLEGERLWGGLADLSGALQVEAEGVLSPDPHDPARSVCDFLQGLIDRSGVEASRLAAVAVGVPGIAHTEGTVSH
APSLGWWQEVPLRDRLRQCFGVPVVVENDVNLMALGEYFQGAGVGVANLALMHVSEGIGAGILIDGNLFRGARNAAGEVG
YLPLGPLSPRRPQDFGLFELHYSSRAIRQQLQAALPEAPGDDGRPVRRLRELAEAGLPWARSLFGDALRHWAHAVASITC
ILNPELVLLAGDAVDCGREGLSEVNRIVADLVPDPPEIRFAVLGSRAALTGAVAMALSLADENAYGIEADQ

Sequences:

>Translated_391_residues
MPRPANARLMKQLNRQAVLSAIRDRGPISRVELAALTGLSQPAVTAIVRDLLDLGLVEEKGLGQSSGGRPPIMLLFNPAA
RFVLAVCLEGERLWGGLADLSGALQVEAEGVLSPDPHDPARSVCDFLQGLIDRSGVEASRLAAVAVGVPGIAHTEGTVSH
APSLGWWQEVPLRDRLRQCFGVPVVVENDVNLMALGEYFQGAGVGVANLALMHVSEGIGAGILIDGNLFRGARNAAGEVG
YLPLGPLSPRRPQDFGLFELHYSSRAIRQQLQAALPEAPGDDGRPVRRLRELAEAGLPWARSLFGDALRHWAHAVASITC
ILNPELVLLAGDAVDCGREGLSEVNRIVADLVPDPPEIRFAVLGSRAALTGAVAMALSLADENAYGIEADQ
>Mature_390_residues
PRPANARLMKQLNRQAVLSAIRDRGPISRVELAALTGLSQPAVTAIVRDLLDLGLVEEKGLGQSSGGRPPIMLLFNPAAR
FVLAVCLEGERLWGGLADLSGALQVEAEGVLSPDPHDPARSVCDFLQGLIDRSGVEASRLAAVAVGVPGIAHTEGTVSHA
PSLGWWQEVPLRDRLRQCFGVPVVVENDVNLMALGEYFQGAGVGVANLALMHVSEGIGAGILIDGNLFRGARNAAGEVGY
LPLGPLSPRRPQDFGLFELHYSSRAIRQQLQAALPEAPGDDGRPVRRLRELAEAGLPWARSLFGDALRHWAHAVASITCI
LNPELVLLAGDAVDCGREGLSEVNRIVADLVPDPPEIRFAVLGSRAALTGAVAMALSLADENAYGIEADQ

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=344, Percent_Identity=27.3255813953488, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787878, Length=336, Percent_Identity=27.9761904761905, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 41387; Mature: 41256

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPANARLMKQLNRQAVLSAIRDRGPISRVELAALTGLSQPAVTAIVRDLLDLGLVEEK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
GLGQSSGGRPPIMLLFNPAARFVLAVCLEGERLWGGLADLSGALQVEAEGVLSPDPHDPA
CCCCCCCCCCCEEEEECHHHHHHHHHHHCCHHHHCCHHHCCCCEEEEECCCCCCCCCCHH
RSVCDFLQGLIDRSGVEASRLAAVAVGVPGIAHTEGTVSHAPSLGWWQEVPLRDRLRQCF
HHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
GVPVVVENDVNLMALGEYFQGAGVGVANLALMHVSEGIGAGILIDGNLFRGARNAAGEVG
CCCEEEECCCCEEEECHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCC
YLPLGPLSPRRPQDFGLFELHYSSRAIRQQLQAALPEAPGDDGRPVRRLRELAEAGLPWA
CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHH
RSLFGDALRHWAHAVASITCILNPELVLLAGDAVDCGREGLSEVNRIVADLVPDPPEIRF
HHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
AVLGSRAALTGAVAMALSLADENAYGIEADQ
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRPANARLMKQLNRQAVLSAIRDRGPISRVELAALTGLSQPAVTAIVRDLLDLGLVEEK
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
GLGQSSGGRPPIMLLFNPAARFVLAVCLEGERLWGGLADLSGALQVEAEGVLSPDPHDPA
CCCCCCCCCCCEEEEECHHHHHHHHHHHCCHHHHCCHHHCCCCEEEEECCCCCCCCCCHH
RSVCDFLQGLIDRSGVEASRLAAVAVGVPGIAHTEGTVSHAPSLGWWQEVPLRDRLRQCF
HHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
GVPVVVENDVNLMALGEYFQGAGVGVANLALMHVSEGIGAGILIDGNLFRGARNAAGEVG
CCCEEEECCCCEEEECHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCC
YLPLGPLSPRRPQDFGLFELHYSSRAIRQQLQAALPEAPGDDGRPVRRLRELAEAGLPWA
CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHH
RSLFGDALRHWAHAVASITCILNPELVLLAGDAVDCGREGLSEVNRIVADLVPDPPEIRF
HHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
AVLGSRAALTGAVAMALSLADENAYGIEADQ
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]