Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is 51893887
Identifier: 51893887
GI number: 51893887
Start: 2966117
End: 2967103
Strand: Reverse
Name: 51893887
Synonym: STH2749
Alternate gene names: NA
Gene position: 2967103-2966117 (Counterclockwise)
Preceding gene: 51893888
Following gene: 51893886
Centisome position: 83.2
GC content: 76.09
Gene sequence:
>987_bases ATGACGTACTACCTTGCGGTGGACGGCGGCGGCACGAAGTGCCTGGCGGTGCTGGTCCACCCGGATCAGGGCATCGTGGG CAGCGGCCGTTCCGGCGGCAGCAACCCGCAGTCGGTGGGCCGCGAGCGGGCCGTGCAGGCGCTGACCGAGGCCGTGCGTC TGGCCTGCCGCCACTTGCCGGAAGGGAGCCGCATCGGCACCGCCGCCTTCGGGCTGGCGGGGGTGGACACCCCCGCGACG GAGGAAGACGCCCGTCAGCTGGCGCAGACCGCCCTGGCCGCGGCCGGGGTCTCGGCCGAATGCGTCCTGGTGGAGAACGA CGGCCTGATCGCCCTGCGGGGGGCTGCCGAGGGCGGGCGCGGCCTGCTGGTCGTGGCCGGCACCGGCTCGGTGGTGTACG CCGGCGACGGCCGGCGGTTTGTCCGGGCCGGGGGCTGGGGCCACCGGGTGGGCGACGTGGGCAGCGCCTTCCACATCGCC CAGCTGGGCCTTGCCGCTGCCTTCCGGTCGCTGGACGCCGGGGATTCCGACACCCCGCTGATCCGCCACCTCTGCGCGGC GGTGGGGGTTGACGACCTCTACGCTCTCTACGACTGGCTCTACCTGCCCGGCACGGGCGTCGATGCCATCGCCGGGCTCG CCCGGGCGGTGGACGCCGCAGCGCAGGCGGGCGACCGGGCGGCCGCGGAGGTCCTGGCCCGGGCCGGCAGCGAACTGGCT GAGGCGGCGGCGCTCGCGGCCCGGCGGGCCGGTCTGGTGGACGGCAGCGCCTTCCCCGTCTTCCTGGTGGGCGGTGTGCT GCAGAACTCGGCGGCCGTGCGTGCGGCTCTGCTGCAGCGGCTGGCCGGGAAGGCCCCCGGCGGCGTGGTCGAAGTGCCCC GCTTTGCGCCCATCTACGGCGCGGTGATCCGGGCTCTGGGCGGCCCCGCCGCGGTGGACCAGCGCCTGCGGGAGCGGCTG CTGGCCGCCGATGTGCTCCTGGCATAG
Upstream 100 bases:
>100_bases TGGCCGGCTGGCTGGACGCTGCCCGGGCGCGGCTGGCGGCGGCCGCTCAGCGGCTGAACTCGGCCTGCCTGGCCCTGTCC GGGGAGGAGGGGGGCCGGGG
Downstream 100 bases:
>100_bases CGAATCGTCTTCAGGCGCAGCGCGCCTGAGGTGAAGTAGAACACTTCCGGATGCGAAGGGAGGTGGATCTGCTCGTTCCC GCTTCCGACACGCGTGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTYYLAVDGGGTKCLAVLVHPDQGIVGSGRSGGSNPQSVGRERAVQALTEAVRLACRHLPEGSRIGTAAFGLAGVDTPAT EEDARQLAQTALAAAGVSAECVLVENDGLIALRGAAEGGRGLLVVAGTGSVVYAGDGRRFVRAGGWGHRVGDVGSAFHIA QLGLAAAFRSLDAGDSDTPLIRHLCAAVGVDDLYALYDWLYLPGTGVDAIAGLARAVDAAAQAGDRAAAEVLARAGSELA EAAALAARRAGLVDGSAFPVFLVGGVLQNSAAVRAALLQRLAGKAPGGVVEVPRFAPIYGAVIRALGGPAAVDQRLRERL LAADVLLA
Sequences:
>Translated_328_residues MTYYLAVDGGGTKCLAVLVHPDQGIVGSGRSGGSNPQSVGRERAVQALTEAVRLACRHLPEGSRIGTAAFGLAGVDTPAT EEDARQLAQTALAAAGVSAECVLVENDGLIALRGAAEGGRGLLVVAGTGSVVYAGDGRRFVRAGGWGHRVGDVGSAFHIA QLGLAAAFRSLDAGDSDTPLIRHLCAAVGVDDLYALYDWLYLPGTGVDAIAGLARAVDAAAQAGDRAAAEVLARAGSELA EAAALAARRAGLVDGSAFPVFLVGGVLQNSAAVRAALLQRLAGKAPGGVVEVPRFAPIYGAVIRALGGPAAVDQRLRERL LAADVLLA >Mature_327_residues TYYLAVDGGGTKCLAVLVHPDQGIVGSGRSGGSNPQSVGRERAVQALTEAVRLACRHLPEGSRIGTAAFGLAGVDTPATE EDARQLAQTALAAAGVSAECVLVENDGLIALRGAAEGGRGLLVVAGTGSVVYAGDGRRFVRAGGWGHRVGDVGSAFHIAQ LGLAAAFRSLDAGDSDTPLIRHLCAAVGVDDLYALYDWLYLPGTGVDAIAGLARAVDAAAQAGDRAAAEVLARAGSELAE AAALAARRAGLVDGSAFPVFLVGGVLQNSAAVRAALLQRLAGKAPGGVVEVPRFAPIYGAVIRALGGPAAVDQRLRERLL AADVLLA
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17536745, Length=335, Percent_Identity=24.1791044776119, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33042; Mature: 32911
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYYLAVDGGGTKCLAVLVHPDQGIVGSGRSGGSNPQSVGRERAVQALTEAVRLACRHLP CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EGSRIGTAAFGLAGVDTPATEEDARQLAQTALAAAGVSAECVLVENDGLIALRGAAEGGR CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCC GLLVVAGTGSVVYAGDGRRFVRAGGWGHRVGDVGSAFHIAQLGLAAAFRSLDAGDSDTPL EEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH IRHLCAAVGVDDLYALYDWLYLPGTGVDAIAGLARAVDAAAQAGDRAAAEVLARAGSELA HHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH EAAALAARRAGLVDGSAFPVFLVGGVLQNSAAVRAALLQRLAGKAPGGVVEVPRFAPIYG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHH AVIRALGGPAAVDQRLRERLLAADVLLA HHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TYYLAVDGGGTKCLAVLVHPDQGIVGSGRSGGSNPQSVGRERAVQALTEAVRLACRHLP EEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EGSRIGTAAFGLAGVDTPATEEDARQLAQTALAAAGVSAECVLVENDGLIALRGAAEGGR CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCC GLLVVAGTGSVVYAGDGRRFVRAGGWGHRVGDVGSAFHIAQLGLAAAFRSLDAGDSDTPL EEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH IRHLCAAVGVDDLYALYDWLYLPGTGVDAIAGLARAVDAAAQAGDRAAAEVLARAGSELA HHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH EAAALAARRAGLVDGSAFPVFLVGGVLQNSAAVRAALLQRLAGKAPGGVVEVPRFAPIYG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHH AVIRALGGPAAVDQRLRERLLAADVLLA HHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA