| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is exeA [H]
Identifier: 51893857
GI number: 51893857
Start: 2916823
End: 2917659
Strand: Reverse
Name: exeA [H]
Synonym: STH2719
Alternate gene names: 51893857
Gene position: 2917659-2916823 (Counterclockwise)
Preceding gene: 51893858
Following gene: 51893856
Centisome position: 81.82
GC content: 64.28
Gene sequence:
>837_bases GTGCTGGCCGAGTTCTTTGGCTTTCGCGTCCTGCCCTTCAGCAAGGAGATCCCGACCACCGACCTGTTTCCGTGTGCACA GCACCAGGAGCTGCTGGCCAGGCTCCAGTACTGCGTGCGCCACCGGGCGTTCGGCCTCATCACCGGTGAGGTGGGATCCG GCAAGACCACTGCGATCCGTACCCTGTACGACCTGCTGGATCGCAGCCGGAATCCGTTTGTCTACATTGCCGACTCCAAG CTCACGCCCACGGCCTTTTACCGCGACGTGCTCACCCAGCTCGGTGTCGCCGCACCCTACCACTTCCTGAGCCGAGAGGC CCGCCGGCTGTTTGAGCAGACCATCCTGGACGGCTACCGGCTGCACGGGCTGCAGCCCGTCATCGTCTTGGACGAGGCCC ATCTGCTGCCGCACGCCATGCTGCAGGAAGTGCGGTTCCTGCTCAACTTCCACCTGGATTCGGCCTGTCCCATGACCTTT CTGCTGGTGGGCCAGTCCGAACTGCGCGGCATGCTCCGCCTGCGCACCTTCGAAGCCATCGCCCAGCGCGTTCAGGTGCG GTACCATCTGGGGCCGCTGAGCGAGGAAGAAAGCGTCGCGTACATCCGGCACCATCTGCGCCGGACGGGCGTCGACCACG ACATCTTCTCGGAACAGGCGCTGCAGAAGATCGCCGCCGAGTCCCGCGGGCTTCCCCGGGTCATTAACACACTCTGCACC AACTGCCTGCTGGACGCCTGCTCCCGTGAACAGCGCTTTGTGGACGAGGCCAATGTCGACCGGGTTCTGTTTGAGCTGCA GGATCTGCAGACCGCCAAGGGCAGCAGCCCGTGGTAA
Upstream 100 bases:
>100_bases CCTCACGCTGGCCAAGAAGCAGCATGACACCGAAAGGCGGAGGCGGCTGGGTGAGACCGCTTACACCCGGCTGACGCAGC CGAAGGGGGGCCAGAACTGA
Downstream 100 bases:
>100_bases TGGAGGGATGACTCGTGCTGGCCTCACTGCGAGCGACCGTGCTGCCTCAGTTTACGGTTGAGGTCTACTTCGATTGTGAG CCGGACTGCCGGACGCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLAEFFGFRVLPFSKEIPTTDLFPCAQHQELLARLQYCVRHRAFGLITGEVGSGKTTAIRTLYDLLDRSRNPFVYIADSK LTPTAFYRDVLTQLGVAAPYHFLSREARRLFEQTILDGYRLHGLQPVIVLDEAHLLPHAMLQEVRFLLNFHLDSACPMTF LLVGQSELRGMLRLRTFEAIAQRVQVRYHLGPLSEEESVAYIRHHLRRTGVDHDIFSEQALQKIAAESRGLPRVINTLCT NCLLDACSREQRFVDEANVDRVLFELQDLQTAKGSSPW
Sequences:
>Translated_278_residues MLAEFFGFRVLPFSKEIPTTDLFPCAQHQELLARLQYCVRHRAFGLITGEVGSGKTTAIRTLYDLLDRSRNPFVYIADSK LTPTAFYRDVLTQLGVAAPYHFLSREARRLFEQTILDGYRLHGLQPVIVLDEAHLLPHAMLQEVRFLLNFHLDSACPMTF LLVGQSELRGMLRLRTFEAIAQRVQVRYHLGPLSEEESVAYIRHHLRRTGVDHDIFSEQALQKIAAESRGLPRVINTLCT NCLLDACSREQRFVDEANVDRVLFELQDLQTAKGSSPW >Mature_278_residues MLAEFFGFRVLPFSKEIPTTDLFPCAQHQELLARLQYCVRHRAFGLITGEVGSGKTTAIRTLYDLLDRSRNPFVYIADSK LTPTAFYRDVLTQLGVAAPYHFLSREARRLFEQTILDGYRLHGLQPVIVLDEAHLLPHAMLQEVRFLLNFHLDSACPMTF LLVGQSELRGMLRLRTFEAIAQRVQVRYHLGPLSEEESVAYIRHHLRRTGVDHDIFSEQALQKIAAESRGLPRVINTLCT NCLLDACSREQRFVDEANVDRVLFELQDLQTAKGSSPW
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 31827; Mature: 31827
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEFFGFRVLPFSKEIPTTDLFPCAQHQELLARLQYCVRHRAFGLITGEVGSGKTTAIR CCCHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH TLYDLLDRSRNPFVYIADSKLTPTAFYRDVLTQLGVAAPYHFLSREARRLFEQTILDGYR HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHH LHGLQPVIVLDEAHLLPHAMLQEVRFLLNFHLDSACPMTFLLVGQSELRGMLRLRTFEAI HCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECHHHHHHHHHHHHHHHH AQRVQVRYHLGPLSEEESVAYIRHHLRRTGVDHDIFSEQALQKIAAESRGLPRVINTLCT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NCLLDACSREQRFVDEANVDRVLFELQDLQTAKGSSPW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAEFFGFRVLPFSKEIPTTDLFPCAQHQELLARLQYCVRHRAFGLITGEVGSGKTTAIR CCCHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH TLYDLLDRSRNPFVYIADSKLTPTAFYRDVLTQLGVAAPYHFLSREARRLFEQTILDGYR HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHH LHGLQPVIVLDEAHLLPHAMLQEVRFLLNFHLDSACPMTFLLVGQSELRGMLRLRTFEAI HCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECHHHHHHHHHHHHHHHH AQRVQVRYHLGPLSEEESVAYIRHHLRRTGVDHDIFSEQALQKIAAESRGLPRVINTLCT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NCLLDACSREQRFVDEANVDRVLFELQDLQTAKGSSPW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]