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The map label for this gene is epsD [H]

Identifier: 51893850

GI number: 51893850

Start: 2909176

End: 2910261

Strand: Reverse

Name: epsD [H]

Synonym: STH2712

Alternate gene names: 51893850

Gene position: 2910261-2909176 (Counterclockwise)

Preceding gene: 51893851

Following gene: 51893849

Centisome position: 81.61

GC content: 52.95

Gene sequence:

>1086_bases
ATGAGAATCTTATACGTGATAACACTGGCAGAGAAAGGTGGGGCCCAAGTTCACCTGCTTGACCTCTTGCGCAACTTTTC
CCGTACAGCAGAGGTGCACTTGGCCGTAGGCGAGCGCGGGTTCTTAACGGATGAGGCGGCACGGTTAGGAATACCAATTC
ATTTGATCGAGGGCTTGGTTCGTCCGGTGAACCCTGCCAAGGATTTTCTTGCAGCACGCGCGCTAGTACGGTTATTGCGT
CGAATAAGACCGGATCTACTTCATGCTCATTCATCGAAGGCTGGTCAGGTGGGGAGACTTGCGGCGAGGTTAGCTGGTGT
CCCGGCAGTATACACAGTCCATGGATGGGCGTTTGCAGATGGGGTACCCCTTTGGCGCAGATGTGTCGCGCTCCCGGCAG
AACGCCTGGCGGCACACTGGTCCAGGTATATGATTACCGTTTCAGACGCCGACAGGTTACTTGCTAGTCGATATCGATTT
CCGACAGACAGGATGTTTGTTGTTCATAACGGTGTTCCTGACGTGGTCCAACGGGCTCAAGTGGGGAGGGCCGACTTACC
TCCTCACATCGTCATGGTAGCTAGGTTCGCCCCGCAAAAGGATCAAGCTCTACTACTAAAGGCACTTTCGAGAGTCAATG
TGCCTTTCACACTTTCGTTTGTTGGGGAGGGTGAAACACAAAGGGAACACCGACAACTGGCCCATCAACTTGGAATGATG
GACCGTGTACGATTCCTAGGAAGCCGCCATGACATCGCGGACATACTAGCGGATGCCCAGATCTTTGTTCTCACCTCGAA
CTGGGAAGGGTTTCCTATAACGATTCTAGAGGCCATGCGTGCGGGCTTACCGGTTATTGCCTCGGATGTGGGCGGAGTGA
GGGAAGCGGTACTGCATGGCAGAACGGGATACCTCGTTGCCAGGGGCGATGTAGATGCGCTGCAACGGTACCTAACTACT
CTTCTAACGGATCCACAGTTACGGGAGAAACTGGGGAATGAGGCTCGCAAAACGTATGAGCAGAGATTTACACTAGATCG
AATGCTCGATCAGACGAGACGCATATACGAGTTGATAATCTCTTAG

Upstream 100 bases:

>100_bases
GAGCTGGGTTTCTGGGATGTGTCGGCCGTAACTTGGCCCTCGACTGCCATGGATTGATAGCCTACTAGACTGGCATCGCG
TCGGAGGGGAAGTAGATGAA

Downstream 100 bases:

>100_bases
CTAGTAGGTGATTTTTGTGAGGGTCTTGGTGGTTGGTGGAGCTGGATACGTCGGCAGTCATGTTGTTCGGGCGCTGTTGG
AGGCAGGTCATGAACCGGTT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRILYVITLAEKGGAQVHLLDLLRNFSRTAEVHLAVGERGFLTDEAARLGIPIHLIEGLVRPVNPAKDFLAARALVRLLR
RIRPDLLHAHSSKAGQVGRLAARLAGVPAVYTVHGWAFADGVPLWRRCVALPAERLAAHWSRYMITVSDADRLLASRYRF
PTDRMFVVHNGVPDVVQRAQVGRADLPPHIVMVARFAPQKDQALLLKALSRVNVPFTLSFVGEGETQREHRQLAHQLGMM
DRVRFLGSRHDIADILADAQIFVLTSNWEGFPITILEAMRAGLPVIASDVGGVREAVLHGRTGYLVARGDVDALQRYLTT
LLTDPQLREKLGNEARKTYEQRFTLDRMLDQTRRIYELIIS

Sequences:

>Translated_361_residues
MRILYVITLAEKGGAQVHLLDLLRNFSRTAEVHLAVGERGFLTDEAARLGIPIHLIEGLVRPVNPAKDFLAARALVRLLR
RIRPDLLHAHSSKAGQVGRLAARLAGVPAVYTVHGWAFADGVPLWRRCVALPAERLAAHWSRYMITVSDADRLLASRYRF
PTDRMFVVHNGVPDVVQRAQVGRADLPPHIVMVARFAPQKDQALLLKALSRVNVPFTLSFVGEGETQREHRQLAHQLGMM
DRVRFLGSRHDIADILADAQIFVLTSNWEGFPITILEAMRAGLPVIASDVGGVREAVLHGRTGYLVARGDVDALQRYLTT
LLTDPQLREKLGNEARKTYEQRFTLDRMLDQTRRIYELIIS
>Mature_361_residues
MRILYVITLAEKGGAQVHLLDLLRNFSRTAEVHLAVGERGFLTDEAARLGIPIHLIEGLVRPVNPAKDFLAARALVRLLR
RIRPDLLHAHSSKAGQVGRLAARLAGVPAVYTVHGWAFADGVPLWRRCVALPAERLAAHWSRYMITVSDADRLLASRYRF
PTDRMFVVHNGVPDVVQRAQVGRADLPPHIVMVARFAPQKDQALLLKALSRVNVPFTLSFVGEGETQREHRQLAHQLGMM
DRVRFLGSRHDIADILADAQIFVLTSNWEGFPITILEAMRAGLPVIASDVGGVREAVLHGRTGYLVARGDVDALQRYLTT
LLTDPQLREKLGNEARKTYEQRFTLDRMLDQTRRIYELIIS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=135, Percent_Identity=31.1111111111111, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40465; Mature: 40465

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILYVITLAEKGGAQVHLLDLLRNFSRTAEVHLAVGERGFLTDEAARLGIPIHLIEGLV
CEEEEEEEEECCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHH
RPVNPAKDFLAARALVRLLRRIRPDLLHAHSSKAGQVGRLAARLAGVPAVYTVHGWAFAD
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCHHHC
GVPLWRRCVALPAERLAAHWSRYMITVSDADRLLASRYRFPTDRMFVVHNGVPDVVQRAQ
CCHHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
VGRADLPPHIVMVARFAPQKDQALLLKALSRVNVPFTLSFVGEGETQREHRQLAHQLGMM
CCCCCCCHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCHH
DRVRFLGSRHDIADILADAQIFVLTSNWEGFPITILEAMRAGLPVIASDVGGVREAVLHG
HHHHHHCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCC
RTGYLVARGDVDALQRYLTTLLTDPQLREKLGNEARKTYEQRFTLDRMLDQTRRIYELII
CCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MRILYVITLAEKGGAQVHLLDLLRNFSRTAEVHLAVGERGFLTDEAARLGIPIHLIEGLV
CEEEEEEEEECCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHH
RPVNPAKDFLAARALVRLLRRIRPDLLHAHSSKAGQVGRLAARLAGVPAVYTVHGWAFAD
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCHHHC
GVPLWRRCVALPAERLAAHWSRYMITVSDADRLLASRYRFPTDRMFVVHNGVPDVVQRAQ
CCHHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
VGRADLPPHIVMVARFAPQKDQALLLKALSRVNVPFTLSFVGEGETQREHRQLAHQLGMM
CCCCCCCHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCHH
DRVRFLGSRHDIADILADAQIFVLTSNWEGFPITILEAMRAGLPVIASDVGGVREAVLHG
HHHHHHCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCC
RTGYLVARGDVDALQRYLTTLLTDPQLREKLGNEARKTYEQRFTLDRMLDQTRRIYELII
CCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]