| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fba [H]
Identifier: 51893821
GI number: 51893821
Start: 2871423
End: 2872277
Strand: Reverse
Name: fba [H]
Synonym: STH2683
Alternate gene names: 51893821
Gene position: 2872277-2871423 (Counterclockwise)
Preceding gene: 51893822
Following gene: 51893820
Centisome position: 80.54
GC content: 65.73
Gene sequence:
>855_bases ATGACTCTGGTCTCACTGAGGACGCTCTTGGATGCAGCACAGGCGGGCAAGTACGCGGTCGGAGCATTCAACTGCAACAA CATGGAGGTCGTTCAGGCAATCGTCGCAGCAGCGGAGGAGGCCCGTTCTCCTGTGATTCTGCAGGCGAGCCAGGGGGCCA TCAAGTACGCGGGCCTTGACTATATCGTGAGCATGGTGAAGGCCGCGGCGGCCAAGGCCACCGTGCCCATGGCGCTCCAC CTGGACCACGGCACCGACTTCAACACCATCATGGCCTGCATCCGGGCCGGCTTCACGTCGGTGATGTTCGACGGGTCGAA GTACGAGAAGGAGGAGAACATCGCCCGCACCAAGGAGATCGTCAAGATCGCGCACGCGGTGGGCGTCTCGGTGGAGGGCG AGATCGGCAAGATCGGCGGCGTGGAGGACGACATCGCCGTCGACGAGCGGGATGCGATGCTCACGCCCGTTCCCGACGCC ATCGAGTTCTACGAGGCCACCGGGGTGGATGCTCTGGCCATGTCCTTCGGCACCGCCCACGGTCCGTACAAGCTGCCGCC CAAGCTGGATCTGGACCGCATCGCCGCGGTGCACCAGAAGACCGGCGCCCCGCTGGTGATGCACGGCGGTTCGGGCGTGC CCGAAGAGGACATGCGCAAGGGCATCGAGCTGGGCATCCGCAAGGTGAACATCGACACCGAGCTGCGGCAGGCCTTCCTG GCCGAGGTGCGGCGCCAGCTGGCCGAGCGGCCGGACGAGCTCGACCCGCGCAAGATCTTCGCTCCGGCCCGCGAGGTGCT GAAGGAGCACATCAAGGAGAAGATGCGGCTCTTCGGCTGCGCCGGCAAGGCGTAG
Upstream 100 bases:
>100_bases AAAGAATCTATAGCTTCTCCGATAGGAAGCAGCCCCACGGCTGGCATAACAGTCCACTTATAAGCAAAGGCGCCCCGTGG GGGCGGTGGGAGGCAAGACG
Downstream 100 bases:
>100_bases TGCGGGCACGATAGGAATCGCGATCGCCGTTGGGGAAACTTACCCAACGGCGATTGTTCTTTGCAGTGCATTAAGGAGGG CACGGAATGCGGCATCTGTT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTLVSLRTLLDAAQAGKYAVGAFNCNNMEVVQAIVAAAEEARSPVILQASQGAIKYAGLDYIVSMVKAAAAKATVPMALH LDHGTDFNTIMACIRAGFTSVMFDGSKYEKEENIARTKEIVKIAHAVGVSVEGEIGKIGGVEDDIAVDERDAMLTPVPDA IEFYEATGVDALAMSFGTAHGPYKLPPKLDLDRIAAVHQKTGAPLVMHGGSGVPEEDMRKGIELGIRKVNIDTELRQAFL AEVRRQLAERPDELDPRKIFAPAREVLKEHIKEKMRLFGCAGKA
Sequences:
>Translated_284_residues MTLVSLRTLLDAAQAGKYAVGAFNCNNMEVVQAIVAAAEEARSPVILQASQGAIKYAGLDYIVSMVKAAAAKATVPMALH LDHGTDFNTIMACIRAGFTSVMFDGSKYEKEENIARTKEIVKIAHAVGVSVEGEIGKIGGVEDDIAVDERDAMLTPVPDA IEFYEATGVDALAMSFGTAHGPYKLPPKLDLDRIAAVHQKTGAPLVMHGGSGVPEEDMRKGIELGIRKVNIDTELRQAFL AEVRRQLAERPDELDPRKIFAPAREVLKEHIKEKMRLFGCAGKA >Mature_283_residues TLVSLRTLLDAAQAGKYAVGAFNCNNMEVVQAIVAAAEEARSPVILQASQGAIKYAGLDYIVSMVKAAAAKATVPMALHL DHGTDFNTIMACIRAGFTSVMFDGSKYEKEENIARTKEIVKIAHAVGVSVEGEIGKIGGVEDDIAVDERDAMLTPVPDAI EFYEATGVDALAMSFGTAHGPYKLPPKLDLDRIAAVHQKTGAPLVMHGGSGVPEEDMRKGIELGIRKVNIDTELRQAFLA EVRRQLAERPDELDPRKIFAPAREVLKEHIKEKMRLFGCAGKA
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=284, Percent_Identity=41.1971830985916, Blast_Score=239, Evalue=1e-64, Organism=Escherichia coli, GI1789526, Length=283, Percent_Identity=42.4028268551237, Blast_Score=236, Evalue=1e-63, Organism=Escherichia coli, GI1788072, Length=284, Percent_Identity=36.6197183098592, Blast_Score=174, Evalue=7e-45, Organism=Escherichia coli, GI1789293, Length=319, Percent_Identity=25.705329153605, Blast_Score=86, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322790, Length=295, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 30615; Mature: 30484
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVSLRTLLDAAQAGKYAVGAFNCNNMEVVQAIVAAAEEARSPVILQASQGAIKYAGLD CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHH YIVSMVKAAAAKATVPMALHLDHGTDFNTIMACIRAGFTSVMFDGSKYEKEENIARTKEI HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHH VKIAHAVGVSVEGEIGKIGGVEDDIAVDERDAMLTPVPDAIEFYEATGVDALAMSFGTAH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCC GPYKLPPKLDLDRIAAVHQKTGAPLVMHGGSGVPEEDMRKGIELGIRKVNIDTELRQAFL CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEEECCCHHHHHHHH AEVRRQLAERPDELDPRKIFAPAREVLKEHIKEKMRLFGCAGKA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLVSLRTLLDAAQAGKYAVGAFNCNNMEVVQAIVAAAEEARSPVILQASQGAIKYAGLD CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHH YIVSMVKAAAAKATVPMALHLDHGTDFNTIMACIRAGFTSVMFDGSKYEKEENIARTKEI HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHH VKIAHAVGVSVEGEIGKIGGVEDDIAVDERDAMLTPVPDAIEFYEATGVDALAMSFGTAH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCC GPYKLPPKLDLDRIAAVHQKTGAPLVMHGGSGVPEEDMRKGIELGIRKVNIDTELRQAFL CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEEECCCHHHHHHHH AEVRRQLAERPDELDPRKIFAPAREVLKEHIKEKMRLFGCAGKA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA