| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is bceB [H]
Identifier: 51893770
GI number: 51893770
Start: 2824859
End: 2826904
Strand: Reverse
Name: bceB [H]
Synonym: STH2632
Alternate gene names: 51893770
Gene position: 2826904-2824859 (Counterclockwise)
Preceding gene: 51893771
Following gene: 51893769
Centisome position: 79.27
GC content: 72.09
Gene sequence:
>2046_bases ATGTACGCTAAGCTGGCCTGGCGCAACCTGCGGCGGAGCCTCCGGGATTACGCGATCTACTTCATGACCCTGGTGTTCGC GGTGGCCATCTTCTACATTTTTAATTCTGTCCCGGACCAGCCGGCCTTCCTCAGCCTGTCCGAAAGCCAGCGGCGCATGG CGCGCGCCGGCGTCGAGGCCATGGAGTGGGTGTCGACGGTCATGACGGGCGTCGTGGCCCTGCTGGTCTTCTACGCCAAC CGGGTGATCGTGCGGAAGCGCAGCCGGGAGCTGGGCACCTACCTGCTGCTGGGCATGGACCAGGGCCGGCTGGCCCTGCT GCTGCTCGCGGAGACCACCGCCATCGGCGCCGCGGCCCTGGGGGCGGGGCTGGCCCTGGGCGTCGCGCTGTCGCAGGCGT TCGGCCTGCTGGTGGAGCAGGTCCTGCGCGTGACGGCCGCCCCGCGGGGCGTGGTCTACTCGCCCCGGGCCGCCCTGTGG ACCCTGCTCCTCTACGGCCTCATGTTCCTGGTGGTCGCCCTGTGGCAGGCGGCGGCGGTCTACCGGCAGCGGCTCATCGA GCTGATCACCGGTTCCCGCCGGAACGAGGAGTTCCCGGTGCGGAGCCGCCCGCTGGCCGCGGGGGCCGGGCTGCTCAGCG CGGCGACCCTGGGGACGGCGTACTGGCTGGCCGACCGGGTGAGCCGGACCACCGGCCTGGATCCTACCGACCCGCGGGTC CCGGTCGGAATCGCCCTGGGCGTGGCGGGCACCTACCTGCTCTTCCTCGCCCTGGCGGGGCTGCTCACGGGCATCCGCCG GCGAGCCCGGGGCTGGCTGGCCCGGGGGCTGAACCTCTTCCTCTACCGGCAGGTGACCAGCAAGATCAACACCCACGCCC TGATGCTGGCCACCATCTCCCTCATGCTCACGTTCACGATCTGCGCGATGTCCACCGGCCTCGGACTCGGGTCTGCGGTC CGGAAGGGGATCGAGGACAGCGTTCCCTTCCGCTACATGGTGACCAGCTCCGATCCCCACCAGGAGTACGCCGGCCTGCG GGCGCTCTTCGCGGCCCACGGCGTGCCGGACGAGCAGGTGGTGGAGTTCGTCCTGGTCTACACCGACCTCCGGGGGGCGG ACCTGATGCTGCCGGAGGATGCCGACCGGCTCCGGGACGACCCCGAGGCGGGACACGCGGCCTGGTTGCAGGTGCGGGCG GTGGCCGCATCGGCCTACCGCGGGCTGCGGGCCCTGAAGGGCCACCCCGACGTCCCGGTTCCCGCCGACGGCTACCTGGT GCATGCCCGCGCCGACGGTCACCCGGCTGCGACCGCCGCGGTCGAGGCGCTCGCGCGGGCGCTGGCGGCCGGACATCGGG TGGAGCTGGCCGGGCATACGCTGCGGCCGGCGGCGAGGCAGGTGCTCACCGAGCCCTTCGGCGGCGGGCTGGTCGGCATC GGTCCGCTCCTGGTGGTGCCCGATGCGGCGCTGGAGACCCTGCTGGCCGGCGGTGAGACCCTGGCGGAGCGGCTCCTGGT GGCCGAGCCGCCCGGGGCGGAACCCGACGGGCTGGCGGAGGCCGCCGCCGAATGGGCCGCCGCACAGTGGCTGGAGGACG GGTGGGTCTCGTTCACCTCGCAGGCCGAGACGATGGGCACCCTGTACCTGATCGAGGGCATCCTGGTCTTCCTCTCGTTC TACGTGGGCATCATGTTCATCCTGATCTCCGCCACCCTGCTGGCCCTGCAGCAGGTGACCGACGTGCTGGAGCACCGGCA GCGCTTCGCCGTGCTCAGCAAGCTGGGCTGCGACGACGCCATGCTGAGCCGCCTCATCGCCCGCCAGGTAGGGCTTTACT TCCTGACACCGGTCCTGGTGGCCCTGCTGCATTCCGGCGTGGCCCTGGTGGCCCTGAACCGGGCCCTGGTCCGGGAGGCC GCCTACGACACCGTCGGCCCCGCCGCCCTGGTGACGGCCGGCATCTTCGCGGCGGTGTACGGCACCTACTACCTGCTGAG CGTGCGCAGCTGCCGCTCCCTCTACCGGCCGGAGGCCGCGGCGTGA
Upstream 100 bases:
>100_bases GGCCGGCTCTTCACCGAGCTGGTGCGGGCGGACGCGCCGCGGCAGCGCTTCTTCGACCGGATCCTCGGGGTCCTGGCCGA GCTGGGGGGTGGCGGGGATG
Downstream 100 bases:
>100_bases CCCGGCCGGGCTGCGGGCTCCCCTTGCGCCTTTTCTGACGTGTGATACGATAGGAATGCGATAAGGAACAGGGGAGCTGA CGCATGTGAAGCGGGAGCAG
Product: ABC transporter permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MYAKLAWRNLRRSLRDYAIYFMTLVFAVAIFYIFNSVPDQPAFLSLSESQRRMARAGVEAMEWVSTVMTGVVALLVFYAN RVIVRKRSRELGTYLLLGMDQGRLALLLLAETTAIGAAALGAGLALGVALSQAFGLLVEQVLRVTAAPRGVVYSPRAALW TLLLYGLMFLVVALWQAAAVYRQRLIELITGSRRNEEFPVRSRPLAAGAGLLSAATLGTAYWLADRVSRTTGLDPTDPRV PVGIALGVAGTYLLFLALAGLLTGIRRRARGWLARGLNLFLYRQVTSKINTHALMLATISLMLTFTICAMSTGLGLGSAV RKGIEDSVPFRYMVTSSDPHQEYAGLRALFAAHGVPDEQVVEFVLVYTDLRGADLMLPEDADRLRDDPEAGHAAWLQVRA VAASAYRGLRALKGHPDVPVPADGYLVHARADGHPAATAAVEALARALAAGHRVELAGHTLRPAARQVLTEPFGGGLVGI GPLLVVPDAALETLLAGGETLAERLLVAEPPGAEPDGLAEAAAEWAAAQWLEDGWVSFTSQAETMGTLYLIEGILVFLSF YVGIMFILISATLLALQQVTDVLEHRQRFAVLSKLGCDDAMLSRLIARQVGLYFLTPVLVALLHSGVALVALNRALVREA AYDTVGPAALVTAGIFAAVYGTYYLLSVRSCRSLYRPEAAA
Sequences:
>Translated_681_residues MYAKLAWRNLRRSLRDYAIYFMTLVFAVAIFYIFNSVPDQPAFLSLSESQRRMARAGVEAMEWVSTVMTGVVALLVFYAN RVIVRKRSRELGTYLLLGMDQGRLALLLLAETTAIGAAALGAGLALGVALSQAFGLLVEQVLRVTAAPRGVVYSPRAALW TLLLYGLMFLVVALWQAAAVYRQRLIELITGSRRNEEFPVRSRPLAAGAGLLSAATLGTAYWLADRVSRTTGLDPTDPRV PVGIALGVAGTYLLFLALAGLLTGIRRRARGWLARGLNLFLYRQVTSKINTHALMLATISLMLTFTICAMSTGLGLGSAV RKGIEDSVPFRYMVTSSDPHQEYAGLRALFAAHGVPDEQVVEFVLVYTDLRGADLMLPEDADRLRDDPEAGHAAWLQVRA VAASAYRGLRALKGHPDVPVPADGYLVHARADGHPAATAAVEALARALAAGHRVELAGHTLRPAARQVLTEPFGGGLVGI GPLLVVPDAALETLLAGGETLAERLLVAEPPGAEPDGLAEAAAEWAAAQWLEDGWVSFTSQAETMGTLYLIEGILVFLSF YVGIMFILISATLLALQQVTDVLEHRQRFAVLSKLGCDDAMLSRLIARQVGLYFLTPVLVALLHSGVALVALNRALVREA AYDTVGPAALVTAGIFAAVYGTYYLLSVRSCRSLYRPEAAA >Mature_681_residues MYAKLAWRNLRRSLRDYAIYFMTLVFAVAIFYIFNSVPDQPAFLSLSESQRRMARAGVEAMEWVSTVMTGVVALLVFYAN RVIVRKRSRELGTYLLLGMDQGRLALLLLAETTAIGAAALGAGLALGVALSQAFGLLVEQVLRVTAAPRGVVYSPRAALW TLLLYGLMFLVVALWQAAAVYRQRLIELITGSRRNEEFPVRSRPLAAGAGLLSAATLGTAYWLADRVSRTTGLDPTDPRV PVGIALGVAGTYLLFLALAGLLTGIRRRARGWLARGLNLFLYRQVTSKINTHALMLATISLMLTFTICAMSTGLGLGSAV RKGIEDSVPFRYMVTSSDPHQEYAGLRALFAAHGVPDEQVVEFVLVYTDLRGADLMLPEDADRLRDDPEAGHAAWLQVRA VAASAYRGLRALKGHPDVPVPADGYLVHARADGHPAATAAVEALARALAAGHRVELAGHTLRPAARQVLTEPFGGGLVGI GPLLVVPDAALETLLAGGETLAERLLVAEPPGAEPDGLAEAAAEWAAAQWLEDGWVSFTSQAETMGTLYLIEGILVFLSF YVGIMFILISATLLALQQVTDVLEHRQRFAVLSKLGCDDAMLSRLIARQVGLYFLTPVLVALLHSGVALVALNRALVREA AYDTVGPAALVTAGIFAAVYGTYYLLSVRSCRSLYRPEAAA
Specific function: Part of the ABC transporter complex BceAB (TC 3.A.1.123.5) involved in bacitracin export [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 73252; Mature: 73252
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAKLAWRNLRRSLRDYAIYFMTLVFAVAIFYIFNSVPDQPAFLSLSESQRRMARAGVEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH MEWVSTVMTGVVALLVFYANRVIVRKRSRELGTYLLLGMDQGRLALLLLAETTAIGAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHHH GAGLALGVALSQAFGLLVEQVLRVTAAPRGVVYSPRAALWTLLLYGLMFLVVALWQAAAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH YRQRLIELITGSRRNEEFPVRSRPLAAGAGLLSAATLGTAYWLADRVSRTTGLDPTDPRV HHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVGIALGVAGTYLLFLALAGLLTGIRRRARGWLARGLNLFLYRQVTSKINTHALMLATIS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLTFTICAMSTGLGLGSAVRKGIEDSVPFRYMVTSSDPHQEYAGLRALFAAHGVPDEQV HHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHH VEFVLVYTDLRGADLMLPEDADRLRDDPEAGHAAWLQVRAVAASAYRGLRALKGHPDVPV HHHHHHHCCCCCCCEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PADGYLVHARADGHPAATAAVEALARALAAGHRVELAGHTLRPAARQVLTEPFGGGLVGI CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCC GPLLVVPDAALETLLAGGETLAERLLVAEPPGAEPDGLAEAAAEWAAAQWLEDGWVSFTS CHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QAETMGTLYLIEGILVFLSFYVGIMFILISATLLALQQVTDVLEHRQRFAVLSKLGCDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MLSRLIARQVGLYFLTPVLVALLHSGVALVALNRALVREAAYDTVGPAALVTAGIFAAVY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GTYYLLSVRSCRSLYRPEAAA HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYAKLAWRNLRRSLRDYAIYFMTLVFAVAIFYIFNSVPDQPAFLSLSESQRRMARAGVEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH MEWVSTVMTGVVALLVFYANRVIVRKRSRELGTYLLLGMDQGRLALLLLAETTAIGAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHHH GAGLALGVALSQAFGLLVEQVLRVTAAPRGVVYSPRAALWTLLLYGLMFLVVALWQAAAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH YRQRLIELITGSRRNEEFPVRSRPLAAGAGLLSAATLGTAYWLADRVSRTTGLDPTDPRV HHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVGIALGVAGTYLLFLALAGLLTGIRRRARGWLARGLNLFLYRQVTSKINTHALMLATIS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLTFTICAMSTGLGLGSAVRKGIEDSVPFRYMVTSSDPHQEYAGLRALFAAHGVPDEQV HHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHH VEFVLVYTDLRGADLMLPEDADRLRDDPEAGHAAWLQVRAVAASAYRGLRALKGHPDVPV HHHHHHHCCCCCCCEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PADGYLVHARADGHPAATAAVEALARALAAGHRVELAGHTLRPAARQVLTEPFGGGLVGI CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCC GPLLVVPDAALETLLAGGETLAERLLVAEPPGAEPDGLAEAAAEWAAAQWLEDGWVSFTS CHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QAETMGTLYLIEGILVFLSFYVGIMFILISATLLALQQVTDVLEHRQRFAVLSKLGCDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MLSRLIARQVGLYFLTPVLVALLHSGVALVALNRALVREAAYDTVGPAALVTAGIFAAVY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GTYYLLSVRSCRSLYRPEAAA HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 14612242; 12890034 [H]