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The map label for this gene is 51893769

Identifier: 51893769

GI number: 51893769

Start: 2824132

End: 2824773

Strand: Reverse

Name: 51893769

Synonym: STH2631

Alternate gene names: NA

Gene position: 2824773-2824132 (Counterclockwise)

Preceding gene: 51893770

Following gene: 51893768

Centisome position: 79.21

GC content: 71.81

Gene sequence:

>642_bases
GTGAAGCGGGAGCAGACCGGTCTGCCACGATACGAAGCCATAGCACTGGACCTGGCGCGGCGCATCGCGTGCGGCGAGCT
GGAGGAGGGCAGCCGGCTGCTGGGCCGGTCCAGCCTGGCCGGCACCTACCAGGTCTCGCCGGAGACCATCCGCCGGGCGG
TGGCGATCCTGCACGAGCGCGGCGTGGTGAAGGCGGTGGCCGGCTCCGGGATCCGGATCCTGTCCCAGGTGGCTGCGCAG
GAGTACGTCGAGGCGGTGGGCAGCCAGTTCAGGGTGGAGCAGGAGATCAGGGAGCTGCGCCAGCTGCTGCGGGAGCGGCG
GCGGCTCGACGAGGAGATCGAAAACGCCCTGGACCGGCTGCTGAAGCACACGTCCGGAGCGATCGGGACCCGGCACGTGG
AGGAGCTGGTACTGGACAGCCACTCCTGGGCCGTGGGCCGGTCGCTGGGGGAGATCCGGCTGCGCTCCTCCACCGGGGTC
ACCGCGGTCGCCATCACCCGGGGCAACGAGGAGTACTTCTCGCCGCCGGCGGACATGGAGCTGAAGGCCGGCGACGTGCT
GACCATCGTGGGTTCGGATGCGGCCCGCGCCCGGTGCCGCGAGCTGCTGGCCGCCACGGTGGTGCCCGAGAGGGAGCCCT
GA

Upstream 100 bases:

>100_bases
GAGGCCGCGGCGTGACCCGGCCGGGCTGCGGGCTCCCCTTGCGCCTTTTCTGACGTGTGATACGATAGGAATGCGATAAG
GAACAGGGGAGCTGACGCAT

Downstream 100 bases:

>100_bases
AAAAGCCCGAAGCCCATCGGCAACCTCGCCGGTGGGCTTCGGGCTTTCCTGTGGGCGCGCCGGGTCCGTGCAGCGCAGCA
ACAATCAACGGGGTTGACAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: GntR Family Transcriptional Regulator; Transcriptional Repressor BusR; Transcriptional Regulator; TrkA Domain-Containing Protein; TrkA-C Domain Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; Gntr-Family Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKREQTGLPRYEAIALDLARRIACGELEEGSRLLGRSSLAGTYQVSPETIRRAVAILHERGVVKAVAGSGIRILSQVAAQ
EYVEAVGSQFRVEQEIRELRQLLRERRRLDEEIENALDRLLKHTSGAIGTRHVEELVLDSHSWAVGRSLGEIRLRSSTGV
TAVAITRGNEEYFSPPADMELKAGDVLTIVGSDAARARCRELLAATVVPEREP

Sequences:

>Translated_213_residues
MKREQTGLPRYEAIALDLARRIACGELEEGSRLLGRSSLAGTYQVSPETIRRAVAILHERGVVKAVAGSGIRILSQVAAQ
EYVEAVGSQFRVEQEIRELRQLLRERRRLDEEIENALDRLLKHTSGAIGTRHVEELVLDSHSWAVGRSLGEIRLRSSTGV
TAVAITRGNEEYFSPPADMELKAGDVLTIVGSDAARARCRELLAATVVPEREP
>Mature_213_residues
MKREQTGLPRYEAIALDLARRIACGELEEGSRLLGRSSLAGTYQVSPETIRRAVAILHERGVVKAVAGSGIRILSQVAAQ
EYVEAVGSQFRVEQEIRELRQLLRERRRLDEEIENALDRLLKHTSGAIGTRHVEELVLDSHSWAVGRSLGEIRLRSSTGV
TAVAITRGNEEYFSPPADMELKAGDVLTIVGSDAARARCRELLAATVVPEREP

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23491; Mature: 23491

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREQTGLPRYEAIALDLARRIACGELEEGSRLLGRSSLAGTYQVSPETIRRAVAILHER
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHC
GVVKAVAGSGIRILSQVAAQEYVEAVGSQFRVEQEIRELRQLLRERRRLDEEIENALDRL
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHTSGAIGTRHVEELVLDSHSWAVGRSLGEIRLRSSTGVTAVAITRGNEEYFSPPADME
HHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHEEEECCCCCEEEEEECCCHHHCCCCCCCE
LKAGDVLTIVGSDAARARCRELLAATVVPEREP
ECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKREQTGLPRYEAIALDLARRIACGELEEGSRLLGRSSLAGTYQVSPETIRRAVAILHER
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHC
GVVKAVAGSGIRILSQVAAQEYVEAVGSQFRVEQEIRELRQLLRERRRLDEEIENALDRL
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHTSGAIGTRHVEELVLDSHSWAVGRSLGEIRLRSSTGVTAVAITRGNEEYFSPPADME
HHHHCCCCHHHHHHHHHHCCCCHHHHCCHHHEEEECCCCCEEEEEECCCHHHCCCCCCCE
LKAGDVLTIVGSDAARARCRELLAATVVPEREP
ECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA