Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51599060
Identifier: 51599060
GI number: 51599060
Start: 855662
End: 856729
Strand: Direct
Name: 51599060
Synonym: BG0834
Alternate gene names: NA
Gene position: 855662-856729 (Clockwise)
Preceding gene: 51599059
Following gene: 51599061
Centisome position: 94.63
GC content: 26.5
Gene sequence:
>1068_bases ATGAAAATAGATATGCTCTTTGTAAAAAGCATCATTCTTACTTTTTTATCCATGAACTTGCTTTTCATGATTTTAATTAT ACTTGGCGATTTATTTGTTAATCTTCTCAGTTATCTTGAAAAGAATATTGGCTTTAAAGATATTCTTTATATTTATTATT TGTATTTGCCAAAAGCTTTCTCAGATGGAGTGGCTTTATCTTTTCTTTTTGCTATTTCCAATCTTATTGGTAATCTCTCT ATGAGAAATGAAATAATAGGTCTTTTTAGTTGCGGAGTTTCACTTACCAGAATATTAAGACCAATCATTTTGATTAGTTT ATTTATTTCATTTGTTCTTTTCTTTTTTGATAATTATTTAGTAATAGATACTGTAGCAAGAAGAGATCTTCTTATTAAGA ATAGCATTGGTAATAGTAGATCTAGTGATAAAACTATAATAATTAGAGATCTTGCTAGAGAAATTTATAATATTAAGTCT TACGATATTAATGAGAATGCTTTTTCCAACTTAATGATTATAATTAAAGACAGTAAAGATGAGTTTCAAACAAGGTATGA TATAGATAAAGCTGAATGGAAAGATAATAAATGGAGGCTTTATGGCATTAGAGAGTTTGTTAAGGTTGGTAGAAAAATCA AGGAGAATGCCTATGATATTCTTGATGGGACAGGGATTATTAAGCTAGAGCCTGATTACATAAGAACTGTGATGCTGTCA TCAAAGGCATTAAATTTTACTAAACTTATTAATTGGATAAGTTTTCTCAAAAGTGAACATTTAAATTATTCTGATGCATT GTTTGATTTGTTAAATAGAGTATTCTTTTCATTTAGATTAATCCTTCTTAGCTTTACTGTTGGGTTTATTGCTCTTGCTC TTAAAAAAAATATTTTTATACTCAGTTTATTAAATAGCATTGCATTTGCTGTTGTTTATGTCATTTCTATTGTAATTTTT AATTTTTTAGCAGATCTTGGTTATTTGCATATATATGTGGCAAGCTCTTTTACAACTATATTTTTTTTGATTATCAATTT TTTTGTTTATAGGATTGTTAGGAAATAA
Upstream 100 bases:
>100_bases ATACTGTTCAGTATGCACCAAATCCCATTATTATTACCATTTTGCCTAATTTGATTTTAATTATTGCAGGAGCAATTCTC TTTTTGAGATTATTAAAAAA
Downstream 100 bases:
>100_bases TATATATAATAATTGTTTAGGATATTTATATGTTTAGCGTAATTAAGAATGACAAACATTCTAATGCAAGGGTTGGATTT CTAAATCTTCCTCATGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLS MRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLVIDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKS YDINENAFSNLMIIIKDSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLS SKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVISIVIF NFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK
Sequences:
>Translated_355_residues MKIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLS MRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLVIDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKS YDINENAFSNLMIIIKDSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLS SKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVISIVIF NFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK >Mature_355_residues MKIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLS MRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLVIDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKS YDINENAFSNLMIIIKDSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLS SKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVISIVIF NFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41262; Mature: 41262
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC SDGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYL CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VIDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKSYDINENAFSNLMIIIKDSKD EEHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHCCEEEEEECCHH EFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLS HHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH SKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEKNIGFKDILYIYYLYLPKAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC SDGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYL CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH VIDTVARRDLLIKNSIGNSRSSDKTIIIRDLAREIYNIKSYDINENAFSNLMIIIKDSKD EEHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHCCEEEEEECCHH EFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRTVMLS HHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH SKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKKNIFI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTIFFLIINFFVYRIVRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA