Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is tgt [H]
Identifier: 51599061
GI number: 51599061
Start: 856759
End: 857886
Strand: Direct
Name: tgt [H]
Synonym: BG0835
Alternate gene names: 51599061
Gene position: 856759-857886 (Clockwise)
Preceding gene: 51599060
Following gene: 51599062
Centisome position: 94.75
GC content: 31.29
Gene sequence:
>1128_bases ATGTTTAGCGTAATTAAGAATGACAAACATTCTAATGCAAGGGTTGGATTTCTAAATCTTCCTCATGGCAGAGTAGATAC TCCTTGCTTTATGCCAGTTGGTACTTTAGGAGCAATGAAAGGCTTAAAGCATTCTGTTCTTGAGAAGTTAAAATGTAATT TAATGCTTGCAAATACGTATCATTTATATTTAAGACCGGGCATTAAAACTATTGAAAAATATGGTGGTCTTCATAATTTT ACAACTTGGAATAAAAATTTTTTAACCGATTCTGGTGGATTTCAGGTGTTTTCTCTTTCTAGTCTAAGAAAAATTGATCT AAAAGGTGTGCGTTTTAAATCTCATCTAGATGGATCTTATCATTATTTTACTCCTGAGGGAGTATTTGCTATGCAAGAAA TTTTTGGCAGCGATATTATTATGCCACTTGATATTTGTAGTTCTTATGGTATTGATTATAATGAAGCCAATTTGTATACA AATATTACAACCAATTGGGCTCGTAGCACATTTAAGGCTTATAAAAACAGAAAAGAGGGATACAACGGGCTTTTATTTTT AATAACTCAGGGAAACTTTTTTAAAGATTTAAGAAAAAGAAGCATCAATGATATATTAGAATTAGACAGTCCAGGTATTG CTATTGGGGGCATTTCTGTTGGAGAACCAAGAGAAAAATATTTAGAAATTCTTGAGTATAGTTCTTTGTTAATGCCAAAA GAAAAACCAAGATATGTAATGGGTATTGGTACTCCCCATTACATACTTGATGCCATATACCATGGCATTGATATTTTTGA TTGTGTTAATCCTGCAAGAATTGCTAGGCACGGGTCTCTTTTAACAGATAATGGAATAATGCGCATTAGTAGAAAAGAGT ATAAAGATGATACTTCCCAGGTAGAAAAGAATTGTGGCTGTACTTTATGTACAAGATATTCAAGAGGATATTTAAGGCAT TTGATAAAATCTAAAGAGCTTTTTGGAATAATTTTGGCAAGTGAGCATAATATTTACTATATGTTCCGATTGATTTCAAA GATCAGAACCGCAATTCTAAATGATAATTTTTTAAACTTTAGAACTTCATATTTAAAAAAGTATGAAGAGGAAAATTTCG ATGAATAA
Upstream 100 bases:
>100_bases TGGCAAGCTCTTTTACAACTATATTTTTTTTGATTATCAATTTTTTTGTTTATAGGATTGTTAGGAAATAATATATATAA TAATTGTTTAGGATATTTAT
Downstream 100 bases:
>100_bases ATATGTTATTTCTACAGTTTTGGTCATGATTTCTACCTTTTTTTCAAGAATAATGGGGTTTATAAAGGTAAAGATTTTCT CTTATTATTTTGGAGCAAAT
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MFSVIKNDKHSNARVGFLNLPHGRVDTPCFMPVGTLGAMKGLKHSVLEKLKCNLMLANTYHLYLRPGIKTIEKYGGLHNF TTWNKNFLTDSGGFQVFSLSSLRKIDLKGVRFKSHLDGSYHYFTPEGVFAMQEIFGSDIIMPLDICSSYGIDYNEANLYT NITTNWARSTFKAYKNRKEGYNGLLFLITQGNFFKDLRKRSINDILELDSPGIAIGGISVGEPREKYLEILEYSSLLMPK EKPRYVMGIGTPHYILDAIYHGIDIFDCVNPARIARHGSLLTDNGIMRISRKEYKDDTSQVEKNCGCTLCTRYSRGYLRH LIKSKELFGIILASEHNIYYMFRLISKIRTAILNDNFLNFRTSYLKKYEEENFDE
Sequences:
>Translated_375_residues MFSVIKNDKHSNARVGFLNLPHGRVDTPCFMPVGTLGAMKGLKHSVLEKLKCNLMLANTYHLYLRPGIKTIEKYGGLHNF TTWNKNFLTDSGGFQVFSLSSLRKIDLKGVRFKSHLDGSYHYFTPEGVFAMQEIFGSDIIMPLDICSSYGIDYNEANLYT NITTNWARSTFKAYKNRKEGYNGLLFLITQGNFFKDLRKRSINDILELDSPGIAIGGISVGEPREKYLEILEYSSLLMPK EKPRYVMGIGTPHYILDAIYHGIDIFDCVNPARIARHGSLLTDNGIMRISRKEYKDDTSQVEKNCGCTLCTRYSRGYLRH LIKSKELFGIILASEHNIYYMFRLISKIRTAILNDNFLNFRTSYLKKYEEENFDE >Mature_375_residues MFSVIKNDKHSNARVGFLNLPHGRVDTPCFMPVGTLGAMKGLKHSVLEKLKCNLMLANTYHLYLRPGIKTIEKYGGLHNF TTWNKNFLTDSGGFQVFSLSSLRKIDLKGVRFKSHLDGSYHYFTPEGVFAMQEIFGSDIIMPLDICSSYGIDYNEANLYT NITTNWARSTFKAYKNRKEGYNGLLFLITQGNFFKDLRKRSINDILELDSPGIAIGGISVGEPREKYLEILEYSSLLMPK EKPRYVMGIGTPHYILDAIYHGIDIFDCVNPARIARHGSLLTDNGIMRISRKEYKDDTSQVEKNCGCTLCTRYSRGYLRH LIKSKELFGIILASEHNIYYMFRLISKIRTAILNDNFLNFRTSYLKKYEEENFDE
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=367, Percent_Identity=38.9645776566758, Blast_Score=273, Evalue=2e-73, Organism=Escherichia coli, GI1786607, Length=359, Percent_Identity=38.9972144846797, Blast_Score=288, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17544680, Length=357, Percent_Identity=36.9747899159664, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI25146502, Length=197, Percent_Identity=26.9035532994924, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI19920510, Length=367, Percent_Identity=38.4196185286104, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI21355311, Length=141, Percent_Identity=31.9148936170213, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 43064; Mature: 43064
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS01109 RIBOSOMAL_L10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVIKNDKHSNARVGFLNLPHGRVDTPCFMPVGTLGAMKGLKHSVLEKLKCNLMLANTY CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE HLYLRPGIKTIEKYGGLHNFTTWNKNFLTDSGGFQVFSLSSLRKIDLKGVRFKSHLDGSY EEEECCCHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCEECCCCEEEHHCCCCCE HYFTPEGVFAMQEIFGSDIIMPLDICSSYGIDYNEANLYTNITTNWARSTFKAYKNRKEG EEECCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCC YNGLLFLITQGNFFKDLRKRSINDILELDSPGIAIGGISVGEPREKYLEILEYSSLLMPK CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC EKPRYVMGIGTPHYILDAIYHGIDIFDCVNPARIARHGSLLTDNGIMRISRKEYKDDTSQ CCCCEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHCCCEEECCCEEEECHHHHCCHHHH VEKNCGCTLCTRYSRGYLRHLIKSKELFGIILASEHNIYYMFRLISKIRTAILNDNFLNF HHHCCCCEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH RTSYLKKYEEENFDE HHHHHHHHHHCCCCC >Mature Secondary Structure MFSVIKNDKHSNARVGFLNLPHGRVDTPCFMPVGTLGAMKGLKHSVLEKLKCNLMLANTY CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE HLYLRPGIKTIEKYGGLHNFTTWNKNFLTDSGGFQVFSLSSLRKIDLKGVRFKSHLDGSY EEEECCCHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCEECCCCEEEHHCCCCCE HYFTPEGVFAMQEIFGSDIIMPLDICSSYGIDYNEANLYTNITTNWARSTFKAYKNRKEG EEECCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCC YNGLLFLITQGNFFKDLRKRSINDILELDSPGIAIGGISVGEPREKYLEILEYSSLLMPK CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC EKPRYVMGIGTPHYILDAIYHGIDIFDCVNPARIARHGSLLTDNGIMRISRKEYKDDTSQ CCCCEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHCCCEEECCCEEEECHHHHCCHHHH VEKNCGCTLCTRYSRGYLRHLIKSKELFGIILASEHNIYYMFRLISKIRTAILNDNFLNF HHHCCCCEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH RTSYLKKYEEENFDE HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]