Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51599000
Identifier: 51599000
GI number: 51599000
Start: 794329
End: 795480
Strand: Direct
Name: 51599000
Synonym: BG0772
Alternate gene names: NA
Gene position: 794329-795480 (Clockwise)
Preceding gene: 51598996
Following gene: 51599007
Centisome position: 87.84
GC content: 27.69
Gene sequence:
>1152_bases ATGAAGAAAAGTGTTTTTTTTATCAAAGAAGGTCCCAAGGAAGTTGATTTTGATATGGAAAAAGTATTTTTAAGAAATGA GTCTGTTGATGTTGTTTCTACAGCTTCAGATAATCTTAAATTTTTTTTAGATGAAAAGCTATTAAAACTCGATAATATAT TAAAAGAAAGACATGGTGAGTTGATTAATTGTTTAAAGGATGTTGAGCTTCGTGTTGAAAGAGTTGAAAAAGAAATGATT GATAATGGGCTTAAGCTTGTTCAAAGAGATTTTATTACTTCTGATTCTAAAGATTTTGAAAAAAAGTCGCCTGAGATTGA CGATTCATTTTCTAATTCTAAAAAAGAAGATAATTTGCCTAATATTTCTATTGGTCAAGAAGAATTAGATGCGCTACTTG AGGGTATTAATTATGCCCCAAAAGAAAGTGAAGTAGTTCAGCATGATGTTAAATTTAATAAAGATAAAGATTTTGATTTA ACTAGCAATTTACATACGGCTGATAATTTTTCGAATATTTCGAATAATTTGATTAAAAAAGAAGGTATTTACGTTGGTAG CGATAATGTGTCTTTAGAAAATATGGAGTTAAATAATAATAACGATCATAATGAAAAATTGGAGAGTTTTGTAGATAATA AACAACATTTAGATTTAATGTATGATAATGGAAATATTGAGCATGAGGATAGTGCTAATTGTACGGTTTTTAAGAGTTCT GGTGAACCTCTTGAGTTAAAAGAATTTGATGACTTTGAAAGCATTTTAAAAAAGGACCTAGATTCTCAAATGATTGAAGG TTCTTTTTCTAATGATGGAGAGAAAAATTTGCGTGATAGTTTAAGAGATGTAGCAGGTCAAGACCAAAGTAATAATATTG CTAATTGTGAAAAGCTTAGTTCTCAAAATATAACTGAGGATCATTCTTCTTCTCATTTCAATTTTCATGATGTTGAAAAG GTTGTGAGCAAATTTAATGCTGAAGAATCTTTAAGTAATGTTGTGCTAAATAGCGATGAAAAAACCGTATTAATAAATTT CATTGATAGGGTAGAAAGTGAGCTTGAGTTAAATCCTAATAGAAATATTTTTAAAGTTAAACAAGAATATGAAGTTTTAA AAAAAGTTAAATTTTTACTTACTAAAGGTTAA
Upstream 100 bases:
>100_bases ATATAGCTTGTAATTATATTCTTAATATACTATATTTACAAGTAGTTAAGGTTGATTTAGATTGTAGTTATATTGAGTAG TTTTGGAGAGCAAGTTTAGC
Downstream 100 bases:
>100_bases AGAATCTATTCAGTTTAAATTCTATTTCATTTTTATATAAAAATTTTTAACTTAATTTTTGATAGCTGAACAATTTTTTT GCTTTATCTAATATATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MKKSVFFIKEGPKEVDFDMEKVFLRNESVDVVSTASDNLKFFLDEKLLKLDNILKERHGELINCLKDVELRVERVEKEMI DNGLKLVQRDFITSDSKDFEKKSPEIDDSFSNSKKEDNLPNISIGQEELDALLEGINYAPKESEVVQHDVKFNKDKDFDL TSNLHTADNFSNISNNLIKKEGIYVGSDNVSLENMELNNNNDHNEKLESFVDNKQHLDLMYDNGNIEHEDSANCTVFKSS GEPLELKEFDDFESILKKDLDSQMIEGSFSNDGEKNLRDSLRDVAGQDQSNNIANCEKLSSQNITEDHSSSHFNFHDVEK VVSKFNAEESLSNVVLNSDEKTVLINFIDRVESELELNPNRNIFKVKQEYEVLKKVKFLLTKG
Sequences:
>Translated_383_residues MKKSVFFIKEGPKEVDFDMEKVFLRNESVDVVSTASDNLKFFLDEKLLKLDNILKERHGELINCLKDVELRVERVEKEMI DNGLKLVQRDFITSDSKDFEKKSPEIDDSFSNSKKEDNLPNISIGQEELDALLEGINYAPKESEVVQHDVKFNKDKDFDL TSNLHTADNFSNISNNLIKKEGIYVGSDNVSLENMELNNNNDHNEKLESFVDNKQHLDLMYDNGNIEHEDSANCTVFKSS GEPLELKEFDDFESILKKDLDSQMIEGSFSNDGEKNLRDSLRDVAGQDQSNNIANCEKLSSQNITEDHSSSHFNFHDVEK VVSKFNAEESLSNVVLNSDEKTVLINFIDRVESELELNPNRNIFKVKQEYEVLKKVKFLLTKG >Mature_383_residues MKKSVFFIKEGPKEVDFDMEKVFLRNESVDVVSTASDNLKFFLDEKLLKLDNILKERHGELINCLKDVELRVERVEKEMI DNGLKLVQRDFITSDSKDFEKKSPEIDDSFSNSKKEDNLPNISIGQEELDALLEGINYAPKESEVVQHDVKFNKDKDFDL TSNLHTADNFSNISNNLIKKEGIYVGSDNVSLENMELNNNNDHNEKLESFVDNKQHLDLMYDNGNIEHEDSANCTVFKSS GEPLELKEFDDFESILKKDLDSQMIEGSFSNDGEKNLRDSLRDVAGQDQSNNIANCEKLSSQNITEDHSSSHFNFHDVEK VVSKFNAEESLSNVVLNSDEKTVLINFIDRVESELELNPNRNIFKVKQEYEVLKKVKFLLTKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43938; Mature: 43938
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVFFIKEGPKEVDFDMEKVFLRNESVDVVSTASDNLKFFLDEKLLKLDNILKERHGE CCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LINCLKDVELRVERVEKEMIDNGLKLVQRDFITSDSKDFEKKSPEIDDSFSNSKKEDNLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC NISIGQEELDALLEGINYAPKESEVVQHDVKFNKDKDFDLTSNLHTADNFSNISNNLIKK CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EGIYVGSDNVSLENMELNNNNDHNEKLESFVDNKQHLDLMYDNGNIEHEDSANCTVFKSS CCEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCC GEPLELKEFDDFESILKKDLDSQMIEGSFSNDGEKNLRDSLRDVAGQDQSNNIANCEKLS CCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHC SQNITEDHSSSHFNFHDVEKVVSKFNAEESLSNVVLNSDEKTVLINFIDRVESELELNPN CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHEECCCCCEEHHHHHHHHHHHEECCCC RNIFKVKQEYEVLKKVKFLLTKG CCEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKSVFFIKEGPKEVDFDMEKVFLRNESVDVVSTASDNLKFFLDEKLLKLDNILKERHGE CCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LINCLKDVELRVERVEKEMIDNGLKLVQRDFITSDSKDFEKKSPEIDDSFSNSKKEDNLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC NISIGQEELDALLEGINYAPKESEVVQHDVKFNKDKDFDLTSNLHTADNFSNISNNLIKK CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EGIYVGSDNVSLENMELNNNNDHNEKLESFVDNKQHLDLMYDNGNIEHEDSANCTVFKSS CCEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCC GEPLELKEFDDFESILKKDLDSQMIEGSFSNDGEKNLRDSLRDVAGQDQSNNIANCEKLS CCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHC SQNITEDHSSSHFNFHDVEKVVSKFNAEESLSNVVLNSDEKTVLINFIDRVESELELNPN CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHEECCCCCEEHHHHHHHHHHHEECCCC RNIFKVKQEYEVLKKVKFLLTKG CCEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA