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The map label for this gene is secF [H]

Identifier: 51598908

GI number: 51598908

Start: 694552

End: 695451

Strand: Direct

Name: secF [H]

Synonym: BG0676

Alternate gene names: 51598908

Gene position: 694552-695451 (Clockwise)

Preceding gene: 161898744

Following gene: 51598909

Centisome position: 76.81

GC content: 25.33

Gene sequence:

>900_bases
ATGCAAAGAGTAATTAATTTTTCAAAATATGGAAGCAATTTTTTAATTGTTAGTGTTATTTTGACTTTTATTGGGCTTAT
TTATACCTTTTTTTATCATGGTGGATACAATTGGGGAATAGATTTTTCTCCTAGAGTTAATATTAATCTTTCAATAGAAA
AATCAGATATTAAAGAAAATGAAATTAAAAGAATATTCTCTCCTATTTATAAGGCTTTAGATGTCAATAGCATTTTTTCA
CCCAATGAGAATAAAAGCGAATTCTCTATTATGGTAAAGTCAGATATTATTGATTATGCTTTTAAAACAGAAGTTCAAAA
AACAATAATGGACGAACTTAAAAAAACATTTAATACCAATATTGAAGTTTTAGATTCTTATTTTATTGATTCAAGCTTTT
CTTCTACTTTGAGAATTAAGTCTATACTTTTAGTATTAGGAACATTTACTCTGATTTTGATTTATATAACTTTAAGATTT
AAACTAAGTTATGCTATTGCTTCCATACTTGCAACATTTCATGATATATTTTTTATAGTTGCTTTTTTAGGGGTATTTAG
AATAGAGATCAATAGTTATATTATTGTGGCAATACTAACCATTATTGGATATTCTTTAAACGACACAATAATTATTTTTG
ATAGGATTAGGGATAATGTTAGGCGATTAACCGATAACACATTTTTAAATGTATTAAATATAAGTATTAGTCAAACTTTA
TCAAGAACTGTTTTGACGTCAGTTACAACATTTGTTGCAGTATTTTCTATTTATGTGTTTACTGAAGGGTCTATAAAAGA
TTTTTCTTTGGTATTTATGGTAGGTGTAATTGTTGGAACTTATTCTTCTGTGTTCATAGCATCTCCAATACTTTTAAATC
TGTATAAAAAGATAAAGTAG

Upstream 100 bases:

>100_bases
GCATCTCTTTTTAGTAGTTTGATTTTTTCAAGATTTATTTTGGAATTGATCATATCTGCTAGAAAAAGCAAATTTATAAG
TATATCTTGGAGTTCAAAAT

Downstream 100 bases:

>100_bases
ATCTTAAATAAGATGATATTGCGACATGAAGTTTTTTGATTTCGGTTCATTGGGATTTTATAGATTTTTTGATTTTCAAA
AATATCTTAATTTTAGTATT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQRVINFSKYGSNFLIVSVILTFIGLIYTFFYHGGYNWGIDFSPRVNINLSIEKSDIKENEIKRIFSPIYKALDVNSIFS
PNENKSEFSIMVKSDIIDYAFKTEVQKTIMDELKKTFNTNIEVLDSYFIDSSFSSTLRIKSILLVLGTFTLILIYITLRF
KLSYAIASILATFHDIFFIVAFLGVFRIEINSYIIVAILTIIGYSLNDTIIIFDRIRDNVRRLTDNTFLNVLNISISQTL
SRTVLTSVTTFVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK

Sequences:

>Translated_299_residues
MQRVINFSKYGSNFLIVSVILTFIGLIYTFFYHGGYNWGIDFSPRVNINLSIEKSDIKENEIKRIFSPIYKALDVNSIFS
PNENKSEFSIMVKSDIIDYAFKTEVQKTIMDELKKTFNTNIEVLDSYFIDSSFSSTLRIKSILLVLGTFTLILIYITLRF
KLSYAIASILATFHDIFFIVAFLGVFRIEINSYIIVAILTIIGYSLNDTIIIFDRIRDNVRRLTDNTFLNVLNISISQTL
SRTVLTSVTTFVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK
>Mature_299_residues
MQRVINFSKYGSNFLIVSVILTFIGLIYTFFYHGGYNWGIDFSPRVNINLSIEKSDIKENEIKRIFSPIYKALDVNSIFS
PNENKSEFSIMVKSDIIDYAFKTEVQKTIMDELKKTFNTNIEVLDSYFIDSSFSSTLRIKSILLVLGTFTLILIYITLRF
KLSYAIASILATFHDIFFIVAFLGVFRIEINSYIIVAILTIIGYSLNDTIIIFDRIRDNVRRLTDNTFLNVLNISISQTL
SRTVLTSVTTFVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=272, Percent_Identity=29.4117647058824, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34180; Mature: 34180

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVINFSKYGSNFLIVSVILTFIGLIYTFFYHGGYNWGIDFSPRVNINLSIEKSDIKEN
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHH
EIKRIFSPIYKALDVNSIFSPNENKSEFSIMVKSDIIDYAFKTEVQKTIMDELKKTFNTN
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEVLDSYFIDSSFSSTLRIKSILLVLGTFTLILIYITLRFKLSYAIASILATFHDIFFIV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGVFRIEINSYIIVAILTIIGYSLNDTIIIFDRIRDNVRRLTDNTFLNVLNISISQTL
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRTVLTSVTTFVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRVINFSKYGSNFLIVSVILTFIGLIYTFFYHGGYNWGIDFSPRVNINLSIEKSDIKEN
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHH
EIKRIFSPIYKALDVNSIFSPNENKSEFSIMVKSDIIDYAFKTEVQKTIMDELKKTFNTN
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEVLDSYFIDSSFSSTLRIKSILLVLGTFTLILIYITLRFKLSYAIASILATFHDIFFIV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGVFRIEINSYIIVAILTIIGYSLNDTIIIFDRIRDNVRRLTDNTFLNVLNISISQTL
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRTVLTSVTTFVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]