Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is lon-2 [H]
Identifier: 51598865
GI number: 51598865
Start: 641769
End: 644177
Strand: Direct
Name: lon-2 [H]
Synonym: BG0629
Alternate gene names: 51598865
Gene position: 641769-644177 (Clockwise)
Preceding gene: 51598864
Following gene: 51598866
Centisome position: 70.97
GC content: 29.68
Gene sequence:
>2409_bases ATGAAATCAATCTTAAATATGATAAAAAATAGAAAAGAAGATCTTCCAATTGTTATTTTAAAAGAAAATGTTCTTTTCCC TAATATTACATTGTGGGTAACCTTTGATAATGAATATGTAATTAATTCCATAGCCCAATCTATGTTAGAGGGAAGGTTGA TTCTTTTTGCATATCCAAATGAATCTAATTATGACGAATTTGGTAAAGGAGGGATTAAAAACCTATGTTCTGTAGGCACT TATTCTAAACTTATCCAGGTTATAAAGGTCAGTAAAGACGTAGTAAAAGTTTTGGTTGAGTGTCAAAGCAGAGTTCTTAT AGACAGTGTTTCAAAAAAAAATGATTATTTAAGAGCCAAAGTTACTTTTGTGCCTGATGTTAGTGGATTAAACAGAGAGC TTTTTACTTATTCTAAATTTTTAAAAGAAACTTACGAAGTTTATAGAAATTCTTTATCTTTAAAATCTTATGATAGTGAT AATGAGCCAATTGATTATTTTGAGAATCCAAGCAAGCTTGTTGATATTATAGCTTCTAATTCAAACTTAGAGAATAGTAT AAAATTAGAGCTTTTGCAAGAGTTAAATGTTAAAACCAGAATAGAAAAGTTAATTGTTAATTTAAACATTGAAATTGACC TTTTAGATCTTAAAAAAGATATTAATTCTAAAGTTAGAGCTAAGCTGGATAAAGGACAAAGAGATTATTTTCTTTCTGAG CAAGTTAAAGAGATACAAAAAAGATTAGGTAAAGATGAGAACGACTATATTGACAGATTAAATTCCAAAGATATTTCAGA AGATGTTAAATCTAAGATTGAAAAAGAAATTTCTAGATTATCTAAAATGCAGATGAATTCTCCCGATGCTAATATTATTA GAAGCTATATAGAATTAATATTAGATCTTCCTTGGAATGAAAATACTCTTATGAAAAATCATTTAAGCGAGATTGAGTTT ATCTTAAGAAATTCTCATTATGGTATGGATGAAGCAAAAGAAAAGATAATAAATTTTTTAGCTGTTTATCAAATTAATTC TAAGGTTAAAGCTCCTATTTTATGCCTTGTAGGACCTCCCGGTATTGGCAAAACATCTCTTGTAGAATCTGTTGCAAGAT CGTTGTCTAGAGAATTTGTTAAAATATCTCTAGGTGGCTTAAGAGATGAGGCAGAAATTAGGGGACACAGAAGAACCTAT GTTGGTTCTCTTCCAGGTGTTTTTATTAGTGCAATGAAAAGAGCAGGCAAATCTAATCCCGTTATTCTTCTCGATGAAAT AGATAAAATTAATAATAGTTATAAAGGAAATCCCGAATCTGCCCTTTTAGAAGTTTTAGATCCCGAGCAAAATTATAAAT TTATAGATCATTATTTAGAAATTCCTTATGATCTTTCTAATGTTTTATTTGTTACAACAGCCAATTCTCTTAATAGTATG TCAAAGCCACTTCTTGATAGGATGGAAATAATTAAAGTTGAGGGTTATTCTTATATTGAAAAGTTAGAGATTGCTAAGAT TTTTTTGATTCCAAGCATAATTAAAGAGAGTTTTTTAGACAAAGTTTATATAAGAATAGAAGACGAGGTTATTTTTAATT TAATTAGAAAGTATACTATGGAATCTGGTGTAAGGGGACTAAAGAGAGTTTTAACTAATTTAATTAGAAAACTCGTAAGG GAGCTGCTTTATAAGTATTCTAAAGATCAAATCATCAAAGGCAATTTTTATTCACCAAGTTCTTTAATACATGGAAACAA TTCACTTTTTACTCATGATCCTGATATTCCAGGTATTTATAAAATAATAAATATTAATAATTATTGTAATTATGTTGATA CTGAGTATAACTTGGATTTAATTAAGATTGACTCTTCTGGATTTGTTTATGGACTTGCTTGGACAAATTATGGTGGCGCA GTTCTTCCTGTTGAGGCAACTAAGTTTGAGAAAACAGGAGACATTATTCTAACAGGAAGTCTTGGGGCTATTATGAAAGA GAGTGCACAGCTTGCATATTCTATAGTTAAGACCTATTCTTCTAAGCTTAATTTTGACATAAAAGAAAGTCCCGAAATTC ATTTACACTTTCCAGAAGGGGCAACGCCAAAAGATGGACCTTCTGCAGGTATTACCATTGCAACAGCAATTGCTTCAATA CTGTCTGACAAGAAGGTCCCCTTGGATCTTGCAATGACTGGTGAGGTGACTTTAAAAGGTTTTGTTCTTCCTGTGGGCGG CATTAAAGAAAAAGTTTTAGCAGCCTATAGAAATGGTATAAACAAAGTTATTTTACCTAAAGATAATAAAAAAGATTATT TTAAGCTTCCAGAAGAAGTTAAGGATAATATAGATGTTAAGTTTGTCTCTAGTTTGGAAGAAGTTTTTGATTATTTGAAT ATTATTTAA
Upstream 100 bases:
>100_bases AAGAAGGTTATTGTTACAAAAGAATCTGTTTTAAATACAGATATTAACCCATTAATTTTGGTGGGAAATGCAATTAAAAA GCCTTGGGCAAAAGAGTTAT
Downstream 100 bases:
>100_bases AAGTTTATATATTTATATTTTAGGAGTAGATATATGAAAGATGGAGTTAGAAGGCCCACAAGCAGTAGGACGTCTTTTAG TGTTCAGCCTTATGCTAAAA
Product: ATP-dependent protease LA
Products: NA
Alternate protein names: ATP-dependent protease La 2 [H]
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MKSILNMIKNRKEDLPIVILKENVLFPNITLWVTFDNEYVINSIAQSMLEGRLILFAYPNESNYDEFGKGGIKNLCSVGT YSKLIQVIKVSKDVVKVLVECQSRVLIDSVSKKNDYLRAKVTFVPDVSGLNRELFTYSKFLKETYEVYRNSLSLKSYDSD NEPIDYFENPSKLVDIIASNSNLENSIKLELLQELNVKTRIEKLIVNLNIEIDLLDLKKDINSKVRAKLDKGQRDYFLSE QVKEIQKRLGKDENDYIDRLNSKDISEDVKSKIEKEISRLSKMQMNSPDANIIRSYIELILDLPWNENTLMKNHLSEIEF ILRNSHYGMDEAKEKIINFLAVYQINSKVKAPILCLVGPPGIGKTSLVESVARSLSREFVKISLGGLRDEAEIRGHRRTY VGSLPGVFISAMKRAGKSNPVILLDEIDKINNSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFVTTANSLNSM SKPLLDRMEIIKVEGYSYIEKLEIAKIFLIPSIIKESFLDKVYIRIEDEVIFNLIRKYTMESGVRGLKRVLTNLIRKLVR ELLYKYSKDQIIKGNFYSPSSLIHGNNSLFTHDPDIPGIYKIININNYCNYVDTEYNLDLIKIDSSGFVYGLAWTNYGGA VLPVEATKFEKTGDIILTGSLGAIMKESAQLAYSIVKTYSSKLNFDIKESPEIHLHFPEGATPKDGPSAGITIATAIASI LSDKKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGINKVILPKDNKKDYFKLPEEVKDNIDVKFVSSLEEVFDYLN II
Sequences:
>Translated_802_residues MKSILNMIKNRKEDLPIVILKENVLFPNITLWVTFDNEYVINSIAQSMLEGRLILFAYPNESNYDEFGKGGIKNLCSVGT YSKLIQVIKVSKDVVKVLVECQSRVLIDSVSKKNDYLRAKVTFVPDVSGLNRELFTYSKFLKETYEVYRNSLSLKSYDSD NEPIDYFENPSKLVDIIASNSNLENSIKLELLQELNVKTRIEKLIVNLNIEIDLLDLKKDINSKVRAKLDKGQRDYFLSE QVKEIQKRLGKDENDYIDRLNSKDISEDVKSKIEKEISRLSKMQMNSPDANIIRSYIELILDLPWNENTLMKNHLSEIEF ILRNSHYGMDEAKEKIINFLAVYQINSKVKAPILCLVGPPGIGKTSLVESVARSLSREFVKISLGGLRDEAEIRGHRRTY VGSLPGVFISAMKRAGKSNPVILLDEIDKINNSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFVTTANSLNSM SKPLLDRMEIIKVEGYSYIEKLEIAKIFLIPSIIKESFLDKVYIRIEDEVIFNLIRKYTMESGVRGLKRVLTNLIRKLVR ELLYKYSKDQIIKGNFYSPSSLIHGNNSLFTHDPDIPGIYKIININNYCNYVDTEYNLDLIKIDSSGFVYGLAWTNYGGA VLPVEATKFEKTGDIILTGSLGAIMKESAQLAYSIVKTYSSKLNFDIKESPEIHLHFPEGATPKDGPSAGITIATAIASI LSDKKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGINKVILPKDNKKDYFKLPEEVKDNIDVKFVSSLEEVFDYLN II >Mature_802_residues MKSILNMIKNRKEDLPIVILKENVLFPNITLWVTFDNEYVINSIAQSMLEGRLILFAYPNESNYDEFGKGGIKNLCSVGT YSKLIQVIKVSKDVVKVLVECQSRVLIDSVSKKNDYLRAKVTFVPDVSGLNRELFTYSKFLKETYEVYRNSLSLKSYDSD NEPIDYFENPSKLVDIIASNSNLENSIKLELLQELNVKTRIEKLIVNLNIEIDLLDLKKDINSKVRAKLDKGQRDYFLSE QVKEIQKRLGKDENDYIDRLNSKDISEDVKSKIEKEISRLSKMQMNSPDANIIRSYIELILDLPWNENTLMKNHLSEIEF ILRNSHYGMDEAKEKIINFLAVYQINSKVKAPILCLVGPPGIGKTSLVESVARSLSREFVKISLGGLRDEAEIRGHRRTY VGSLPGVFISAMKRAGKSNPVILLDEIDKINNSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFVTTANSLNSM SKPLLDRMEIIKVEGYSYIEKLEIAKIFLIPSIIKESFLDKVYIRIEDEVIFNLIRKYTMESGVRGLKRVLTNLIRKLVR ELLYKYSKDQIIKGNFYSPSSLIHGNNSLFTHDPDIPGIYKIININNYCNYVDTEYNLDLIKIDSSGFVYGLAWTNYGGA VLPVEATKFEKTGDIILTGSLGAIMKESAQLAYSIVKTYSSKLNFDIKESPEIHLHFPEGATPKDGPSAGITIATAIASI LSDKKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGINKVILPKDNKKDYFKLPEEVKDNIDVKFVSSLEEVFDYLN II
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=830, Percent_Identity=35.1807228915663, Blast_Score=468, Evalue=1e-131, Organism=Homo sapiens, GI21396489, Length=673, Percent_Identity=38.038632986627, Blast_Score=464, Evalue=1e-130, Organism=Escherichia coli, GI1786643, Length=800, Percent_Identity=39.875, Blast_Score=572, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17505831, Length=663, Percent_Identity=38.1598793363499, Blast_Score=447, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17556486, Length=637, Percent_Identity=36.4207221350078, Blast_Score=427, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319449, Length=715, Percent_Identity=38.041958041958, Blast_Score=470, Evalue=1e-133, Organism=Drosophila melanogaster, GI221513036, Length=693, Percent_Identity=38.6724386724387, Blast_Score=473, Evalue=1e-133, Organism=Drosophila melanogaster, GI24666867, Length=693, Percent_Identity=38.6724386724387, Blast_Score=473, Evalue=1e-133,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 91074; Mature: 91074
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILNMIKNRKEDLPIVILKENVLFPNITLWVTFDNEYVINSIAQSMLEGRLILFAYPN CHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCC ESNYDEFGKGGIKNLCSVGTYSKLIQVIKVSKDVVKVLVECQSRVLIDSVSKKNDYLRAK CCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VTFVPDVSGLNRELFTYSKFLKETYEVYRNSLSLKSYDSDNEPIDYFENPSKLVDIIASN EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC SNLENSIKLELLQELNVKTRIEKLIVNLNIEIDLLDLKKDINSKVRAKLDKGQRDYFLSE CCCCHHHHHHHHHHCCHHHHHHHHHEEECEEEEEEHHHHHHCHHHHHHHCCCCCCHHHHH QVKEIQKRLGKDENDYIDRLNSKDISEDVKSKIEKEISRLSKMQMNSPDANIIRSYIELI HHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LDLPWNENTLMKNHLSEIEFILRNSHYGMDEAKEKIINFLAVYQINSKVKAPILCLVGPP HCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEECCC GIGKTSLVESVARSLSREFVKISLGGLRDEAEIRGHRRTYVGSLPGVFISAMKRAGKSNP CCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCC VILLDEIDKINNSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFVTTANSLNSM EEEEECHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHHH SKPLLDRMEIIKVEGYSYIEKLEIAKIFLIPSIIKESFLDKVYIRIEDEVIFNLIRKYTM HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHH ESGVRGLKRVLTNLIRKLVRELLYKYSKDQIIKGNFYSPSSLIHGNNSLFTHDPDIPGIY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECCCCEEECCCCCCCEE KIININNYCNYVDTEYNLDLIKIDSSGFVYGLAWTNYGGAVLPVEATKFEKTGDIILTGS EEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEECC LGAIMKESAQLAYSIVKTYSSKLNFDIKESPEIHLHFPEGATPKDGPSAGITIATAIASI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH LSDKKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGINKVILPKDNKKDYFKLPEEV HCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHCCCHHH KDNIDVKFVSSLEEVFDYLNII HCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSILNMIKNRKEDLPIVILKENVLFPNITLWVTFDNEYVINSIAQSMLEGRLILFAYPN CHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCC ESNYDEFGKGGIKNLCSVGTYSKLIQVIKVSKDVVKVLVECQSRVLIDSVSKKNDYLRAK CCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VTFVPDVSGLNRELFTYSKFLKETYEVYRNSLSLKSYDSDNEPIDYFENPSKLVDIIASN EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC SNLENSIKLELLQELNVKTRIEKLIVNLNIEIDLLDLKKDINSKVRAKLDKGQRDYFLSE CCCCHHHHHHHHHHCCHHHHHHHHHEEECEEEEEEHHHHHHCHHHHHHHCCCCCCHHHHH QVKEIQKRLGKDENDYIDRLNSKDISEDVKSKIEKEISRLSKMQMNSPDANIIRSYIELI HHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LDLPWNENTLMKNHLSEIEFILRNSHYGMDEAKEKIINFLAVYQINSKVKAPILCLVGPP HCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEECCC GIGKTSLVESVARSLSREFVKISLGGLRDEAEIRGHRRTYVGSLPGVFISAMKRAGKSNP CCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCC VILLDEIDKINNSYKGNPESALLEVLDPEQNYKFIDHYLEIPYDLSNVLFVTTANSLNSM EEEEECHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECHHHHHH SKPLLDRMEIIKVEGYSYIEKLEIAKIFLIPSIIKESFLDKVYIRIEDEVIFNLIRKYTM HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHH ESGVRGLKRVLTNLIRKLVRELLYKYSKDQIIKGNFYSPSSLIHGNNSLFTHDPDIPGIY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECCCCEEECCCCCCCEE KIININNYCNYVDTEYNLDLIKIDSSGFVYGLAWTNYGGAVLPVEATKFEKTGDIILTGS EEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEECC LGAIMKESAQLAYSIVKTYSSKLNFDIKESPEIHLHFPEGATPKDGPSAGITIATAIASI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH LSDKKVPLDLAMTGEVTLKGFVLPVGGIKEKVLAAYRNGINKVILPKDNKKDYFKLPEEV HCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHCCCHHH KDNIDVKFVSSLEEVFDYLNII HCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]