| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is pqqL [H]
Identifier: 51598787
GI number: 51598787
Start: 546765
End: 549566
Strand: Direct
Name: pqqL [H]
Synonym: BG0544
Alternate gene names: 51598787
Gene position: 546765-549566 (Clockwise)
Preceding gene: 51598786
Following gene: 51598792
Centisome position: 60.47
GC content: 26.73
Gene sequence:
>2802_bases ATGAATTGTCAAAGAATTAAAAATTATTGGAAATTTACAAGCGTTTTTCTATTTTTTTTGTTTTCCTGTGTTTCTAATGA TTTAAAGCTAGATAAAAACTTAGTAAAGGGGAAACTTGTTAATGGACTTAGCTATTATATTTATAAAAATCAAACCCCAA AGAATGCTGTTAATATGGGAATTGTCTTTAATGTCGGCTCTATTAATGAAGAAGATAATGAGAGGGGCATTGCTCATTAT CTTGAACATATGGCCTTTAATGGTACAAAAGATTATCCTGGGAATTCTATTGTCGATGTTCTTAAAAAATTTGGAATGCA ATTTGGCGCTGATATTAATGCTGCTACTAGTTTTGATTTCACTTATTATAGACTTGATTTGTCAGATGGTAACAATAAAG ATGAAATTGATGAATCTATAAATATTTTGAGGAACTGGGCTTCTCAAATCAGCTTCATTAAAGAAGAAATAGATTTGGAG CGTAATATTATTATTGAGGAAAAAAAGTTGGGTGAAACTTATCCTAGAAGGATTTATGAAAAAATGTATAAGTTTTTGGC AAGCGGAAGTATTTATGAATTTAGAAATCCTATTGGACTTGAAGAGCAAATTTTGTTTTTTCAGCCAGAAGATTTCAAAA AATTTTATCGAAAGTGGTATAGGCCAGAACTTGCGAGTGTTATTGTGGTAGGAGATATTGATCCTAGAGAAATTGAAGAG AAAATCAAGAAGCAATTTATTTCTTGGAAAAATCCAACTGATAAAATTAAAAAGGTAAAAGTAAATTTAGATGTAAGGCT TAAAGATAAGTTTTTACTTTTAGAAGATTTGGAAGTGGGGGAGCCCAGTTTAATGTTCTTTAAAAAGGAAATTGTTAACG TAGAACAGACTAAAGATGATGTTTTAAATGGTATTAAAAGTTCTTTATTGGCTGCTCTTTTTGAAAATAGATTTTCTGAA TTAAAGACTGTTGGGGTAAAGCATTTTAAAAATGTTTCAAATAAAGATTTTTTTTCATTTAAATCAGATAACAATACTAT TGTTGCAAGATCAATTTCCTTAAACTTTAATCCAGATTATTTGAAGGAAGGAATAGAAGACTTTTTTTATGAGCTTGAGA GAATAAAAAAATTTGGATTTACTCAGGATGAGTTTAAAAAAGTTAGATCTCAATTTTTTAAATTTTTATCACTAAAGAAA GATAATATAAATAAAACAAATTCATGGGCTATTTTTGAAGATTTAATAGACCTTGCTGTTGGTGGTTCTAATAAATTCGA TATGAGTGAATATTGCGATCTTTCTTTACAATATTTAGGAAAAATTGATTTAAAGACAATGAACAATCTTGTAGAAAAAG AGTTTGATGTGAAAAATTGTGCAATTTTTTATTCTTATAATGGAAGAGTACATCCTACTTTGGCTTTTGAAGACGTTGAT AATCTTCAAAAGATAGCTTTAAAAAGAGAGTTTAAGCCTTATGAGAATTCTTCAATTGAAGGTAAATTTTTTAAAGAGTC TTTAGAGAATAAAGATATTATTAGAGAAAATGAGCTTGAAAATAAAATTTCATCATTTGTTATTGAAAATGGAGTTGAAG TTTATTTTAAATATAATGATCAAAAAAAAGGTGTAATTGATTTTAGAGCAACTTCTTGGGGAGGTTTAATCAATGAGAAT CCAAAGCTTATTCCTGTTTTAACTTTTGCTCCTTTAGTAGTATCTAGTTCAGGCTACGGTGATTATTCTGCATTGCAGAT TGAAAAATATTTATCAGATAAATCTGTTTCTTTAAATGTTAGTGTTGGAGCCCAAGAATCATATATTGTTGGAAGTTCAG CTCAAAAAGATCTTGAAACTCTTTTTGAGCTTATATATTTTACTTTTAAGGCACCCAAAATAGATGATGTTTTCTTGCAA AATGCTATTAATGATATAAAAGCATTAATAAAGAGCGATGAAAATAATTCTAAATATCATTTTAACAAAGCTATTAGTAA ATTTTTAAACAATAATGATCCTAGATTTGAAGATCCAAAAGATAGTGATTTGCAATATTTTACAAAAGAAAATATTTTAT CTTTTTATAAGAAAAGGTTTACTTATGCAAATAATTTTAAGTTTGTTTTTGTTGGAGATTCAGATATTGAGACAATAAAA GCTTATTCAAAGAAATATTTAGGAAATCTTAACTTTAAAAAAATAAGCGAGTATAAAGATTTAGATTATTCTTATAGTAA GAATTTTAATAAAACAGTTATAAGGAAGGGAAAAGATTTAACTAGCTTTGCTTATGTGGTTTATCCTTTTAAATTTAATT ATTTAGAAGAAACCTCATTAAATTTAAATGCTTTAGCGGATCTTTTAACGGATGATCTTATAAAAAATATTAGAGAAAAA ATGTCGAGTGTTTATTCAATTCAAGCTTCTTTTGACTCCAATTTAAGGAAATATGTAGATTCCGATGGTATTTTGTCTAT TGTTTTTACTACTGAGCCCAAGGAGCTGGATAATGTTTTGAATTCTATTAATCGCTATATGATCGAAAGGCAAAAAATAG ATTTTAGTGATCAAGATTTTTCTTATGTTAAGAAAAATTATATTAAAAATACAAAGATAAATTCAGAAAAAAATAGTTAT TGGATTTCAAATATATTAGCATCATTATCCTGGCATGGAGTATTTAAAAATAATTTTGGTGTTAAGTTTATAGAGGCAAA TTTAAGCAAAGATTTGATAAATAAATTTTTTAAGAAAATTAATCTTAACGAAAAAGCAGAGATATTGTTAATACCCGAAT AG
Upstream 100 bases:
>100_bases AAGAGTTTAAAAGATTGGAATGATTTTGGATTTTCATCTATTTCAAAAACATTAAATAAAATTTATTCTGAAAAAATAAA TTTAAAAAAGGGGAGTGCAA
Downstream 100 bases:
>100_bases GTTATGTTTATTGAAAACCTAACAGACTAAATATAACTTTTTCTTAAAAGACATCCTCTAGGGGAATCGAACCCCTCTTG CCAGGATGAAAACCTGGAGT
Product: zinc protease, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MNCQRIKNYWKFTSVFLFFLFSCVSNDLKLDKNLVKGKLVNGLSYYIYKNQTPKNAVNMGIVFNVGSINEEDNERGIAHY LEHMAFNGTKDYPGNSIVDVLKKFGMQFGADINAATSFDFTYYRLDLSDGNNKDEIDESINILRNWASQISFIKEEIDLE RNIIIEEKKLGETYPRRIYEKMYKFLASGSIYEFRNPIGLEEQILFFQPEDFKKFYRKWYRPELASVIVVGDIDPREIEE KIKKQFISWKNPTDKIKKVKVNLDVRLKDKFLLLEDLEVGEPSLMFFKKEIVNVEQTKDDVLNGIKSSLLAALFENRFSE LKTVGVKHFKNVSNKDFFSFKSDNNTIVARSISLNFNPDYLKEGIEDFFYELERIKKFGFTQDEFKKVRSQFFKFLSLKK DNINKTNSWAIFEDLIDLAVGGSNKFDMSEYCDLSLQYLGKIDLKTMNNLVEKEFDVKNCAIFYSYNGRVHPTLAFEDVD NLQKIALKREFKPYENSSIEGKFFKESLENKDIIRENELENKISSFVIENGVEVYFKYNDQKKGVIDFRATSWGGLINEN PKLIPVLTFAPLVVSSSGYGDYSALQIEKYLSDKSVSLNVSVGAQESYIVGSSAQKDLETLFELIYFTFKAPKIDDVFLQ NAINDIKALIKSDENNSKYHFNKAISKFLNNNDPRFEDPKDSDLQYFTKENILSFYKKRFTYANNFKFVFVGDSDIETIK AYSKKYLGNLNFKKISEYKDLDYSYSKNFNKTVIRKGKDLTSFAYVVYPFKFNYLEETSLNLNALADLLTDDLIKNIREK MSSVYSIQASFDSNLRKYVDSDGILSIVFTTEPKELDNVLNSINRYMIERQKIDFSDQDFSYVKKNYIKNTKINSEKNSY WISNILASLSWHGVFKNNFGVKFIEANLSKDLINKFFKKINLNEKAEILLIPE
Sequences:
>Translated_933_residues MNCQRIKNYWKFTSVFLFFLFSCVSNDLKLDKNLVKGKLVNGLSYYIYKNQTPKNAVNMGIVFNVGSINEEDNERGIAHY LEHMAFNGTKDYPGNSIVDVLKKFGMQFGADINAATSFDFTYYRLDLSDGNNKDEIDESINILRNWASQISFIKEEIDLE RNIIIEEKKLGETYPRRIYEKMYKFLASGSIYEFRNPIGLEEQILFFQPEDFKKFYRKWYRPELASVIVVGDIDPREIEE KIKKQFISWKNPTDKIKKVKVNLDVRLKDKFLLLEDLEVGEPSLMFFKKEIVNVEQTKDDVLNGIKSSLLAALFENRFSE LKTVGVKHFKNVSNKDFFSFKSDNNTIVARSISLNFNPDYLKEGIEDFFYELERIKKFGFTQDEFKKVRSQFFKFLSLKK DNINKTNSWAIFEDLIDLAVGGSNKFDMSEYCDLSLQYLGKIDLKTMNNLVEKEFDVKNCAIFYSYNGRVHPTLAFEDVD NLQKIALKREFKPYENSSIEGKFFKESLENKDIIRENELENKISSFVIENGVEVYFKYNDQKKGVIDFRATSWGGLINEN PKLIPVLTFAPLVVSSSGYGDYSALQIEKYLSDKSVSLNVSVGAQESYIVGSSAQKDLETLFELIYFTFKAPKIDDVFLQ NAINDIKALIKSDENNSKYHFNKAISKFLNNNDPRFEDPKDSDLQYFTKENILSFYKKRFTYANNFKFVFVGDSDIETIK AYSKKYLGNLNFKKISEYKDLDYSYSKNFNKTVIRKGKDLTSFAYVVYPFKFNYLEETSLNLNALADLLTDDLIKNIREK MSSVYSIQASFDSNLRKYVDSDGILSIVFTTEPKELDNVLNSINRYMIERQKIDFSDQDFSYVKKNYIKNTKINSEKNSY WISNILASLSWHGVFKNNFGVKFIEANLSKDLINKFFKKINLNEKAEILLIPE >Mature_933_residues MNCQRIKNYWKFTSVFLFFLFSCVSNDLKLDKNLVKGKLVNGLSYYIYKNQTPKNAVNMGIVFNVGSINEEDNERGIAHY LEHMAFNGTKDYPGNSIVDVLKKFGMQFGADINAATSFDFTYYRLDLSDGNNKDEIDESINILRNWASQISFIKEEIDLE RNIIIEEKKLGETYPRRIYEKMYKFLASGSIYEFRNPIGLEEQILFFQPEDFKKFYRKWYRPELASVIVVGDIDPREIEE KIKKQFISWKNPTDKIKKVKVNLDVRLKDKFLLLEDLEVGEPSLMFFKKEIVNVEQTKDDVLNGIKSSLLAALFENRFSE LKTVGVKHFKNVSNKDFFSFKSDNNTIVARSISLNFNPDYLKEGIEDFFYELERIKKFGFTQDEFKKVRSQFFKFLSLKK DNINKTNSWAIFEDLIDLAVGGSNKFDMSEYCDLSLQYLGKIDLKTMNNLVEKEFDVKNCAIFYSYNGRVHPTLAFEDVD NLQKIALKREFKPYENSSIEGKFFKESLENKDIIRENELENKISSFVIENGVEVYFKYNDQKKGVIDFRATSWGGLINEN PKLIPVLTFAPLVVSSSGYGDYSALQIEKYLSDKSVSLNVSVGAQESYIVGSSAQKDLETLFELIYFTFKAPKIDDVFLQ NAINDIKALIKSDENNSKYHFNKAISKFLNNNDPRFEDPKDSDLQYFTKENILSFYKKRFTYANNFKFVFVGDSDIETIK AYSKKYLGNLNFKKISEYKDLDYSYSKNFNKTVIRKGKDLTSFAYVVYPFKFNYLEETSLNLNALADLLTDDLIKNIREK MSSVYSIQASFDSNLRKYVDSDGILSIVFTTEPKELDNVLNSINRYMIERQKIDFSDQDFSYVKKNYIKNTKINSEKNSY WISNILASLSWHGVFKNNFGVKFIEANLSKDLINKFFKKINLNEKAEILLIPE
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=896, Percent_Identity=25.6696428571429, Blast_Score=240, Evalue=3e-64, Organism=Escherichia coli, GI1789946, Length=390, Percent_Identity=22.3076923076923, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 108734; Mature: 108734
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCQRIKNYWKFTSVFLFFLFSCVSNDLKLDKNLVKGKLVNGLSYYIYKNQTPKNAVNMG CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEE IVFNVGSINEEDNERGIAHYLEHMAFNGTKDYPGNSIVDVLKKFGMQFGADINAATSFDF EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCE TYYRLDLSDGNNKDEIDESINILRNWASQISFIKEEIDLERNIIIEEKKLGETYPRRIYE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHH KMYKFLASGSIYEFRNPIGLEEQILFFQPEDFKKFYRKWYRPELASVIVVGDIDPREIEE HHHHHHHCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH KIKKQFISWKNPTDKIKKVKVNLDVRLKDKFLLLEDLEVGEPSLMFFKKEIVNVEQTKDD HHHHHHHCCCCCHHHHEEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHCHHHHHHH VLNGIKSSLLAALFENRFSELKTVGVKHFKNVSNKDFFSFKSDNNTIVARSISLNFNPDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEECCCHHH LKEGIEDFFYELERIKKFGFTQDEFKKVRSQFFKFLSLKKDNINKTNSWAIFEDLIDLAV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC GGSNKFDMSEYCDLSLQYLGKIDLKTMNNLVEKEFDVKNCAIFYSYNGRVHPTLAFEDVD CCCCCCCHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCEECCEEEHHHHH NLQKIALKREFKPYENSSIEGKFFKESLENKDIIRENELENKISSFVIENGVEVYFKYND HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECC QKKGVIDFRATSWGGLINENPKLIPVLTFAPLVVSSSGYGDYSALQIEKYLSDKSVSLNV CCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEE SVGAQESYIVGSSAQKDLETLFELIYFTFKAPKIDDVFLQNAINDIKALIKSDENNSKYH EECCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH FNKAISKFLNNNDPRFEDPKDSDLQYFTKENILSFYKKRFTYANNFKFVFVGDSDIETIK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCCCHHHHH AYSKKYLGNLNFKKISEYKDLDYSYSKNFNKTVIRKGKDLTSFAYVVYPFKFNYLEETSL HHHHHHHCCCCHHHHHHHHCCCCHHCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCCCCC NLNALADLLTDDLIKNIREKMSSVYSIQASFDSNLRKYVDSDGILSIVFTTEPKELDNVL CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHH NSINRYMIERQKIDFSDQDFSYVKKNYIKNTKINSEKNSYWISNILASLSWHGVFKNNFG HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCC VKFIEANLSKDLINKFFKKINLNEKAEILLIPE EEEEECCCCHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MNCQRIKNYWKFTSVFLFFLFSCVSNDLKLDKNLVKGKLVNGLSYYIYKNQTPKNAVNMG CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEE IVFNVGSINEEDNERGIAHYLEHMAFNGTKDYPGNSIVDVLKKFGMQFGADINAATSFDF EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCE TYYRLDLSDGNNKDEIDESINILRNWASQISFIKEEIDLERNIIIEEKKLGETYPRRIYE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHH KMYKFLASGSIYEFRNPIGLEEQILFFQPEDFKKFYRKWYRPELASVIVVGDIDPREIEE HHHHHHHCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH KIKKQFISWKNPTDKIKKVKVNLDVRLKDKFLLLEDLEVGEPSLMFFKKEIVNVEQTKDD HHHHHHHCCCCCHHHHEEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHCHHHHHHH VLNGIKSSLLAALFENRFSELKTVGVKHFKNVSNKDFFSFKSDNNTIVARSISLNFNPDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEECCCHHH LKEGIEDFFYELERIKKFGFTQDEFKKVRSQFFKFLSLKKDNINKTNSWAIFEDLIDLAV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC GGSNKFDMSEYCDLSLQYLGKIDLKTMNNLVEKEFDVKNCAIFYSYNGRVHPTLAFEDVD CCCCCCCHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCEECCEEEHHHHH NLQKIALKREFKPYENSSIEGKFFKESLENKDIIRENELENKISSFVIENGVEVYFKYND HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECC QKKGVIDFRATSWGGLINENPKLIPVLTFAPLVVSSSGYGDYSALQIEKYLSDKSVSLNV CCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEE SVGAQESYIVGSSAQKDLETLFELIYFTFKAPKIDDVFLQNAINDIKALIKSDENNSKYH EECCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH FNKAISKFLNNNDPRFEDPKDSDLQYFTKENILSFYKKRFTYANNFKFVFVGDSDIETIK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCCCHHHHH AYSKKYLGNLNFKKISEYKDLDYSYSKNFNKTVIRKGKDLTSFAYVVYPFKFNYLEETSL HHHHHHHCCCCHHHHHHHHCCCCHHCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCCCCC NLNALADLLTDDLIKNIREKMSSVYSIQASFDSNLRKYVDSDGILSIVFTTEPKELDNVL CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHH NSINRYMIERQKIDFSDQDFSYVKKNYIKNTKINSEKNSYWISNILASLSWHGVFKNNFG HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCC VKFIEANLSKDLINKFFKKINLNEKAEILLIPE EEEEECCCCHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]