Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598786
Identifier: 51598786
GI number: 51598786
Start: 546011
End: 546784
Strand: Direct
Name: 51598786
Synonym: BG0543
Alternate gene names: NA
Gene position: 546011-546784 (Clockwise)
Preceding gene: 51598785
Following gene: 51598787
Centisome position: 60.38
GC content: 22.09
Gene sequence:
>774_bases TTGAAAAAAAATATTGCAATTTTTTATTTAATATTTAGTGCTATTTTTAGTTTTGGCATTAATTTAAATGATTTTGATTT TTACCGTAGTCTTGAAAAGGAAGAATTGATGTTTTTTATTAATTTGCTAAAGAGAGAGCAACTTACTTTGGCAAATAGTT GTGCTTTAGAGTATATTGAATTAGCTTATAAAGCATTAAAAGAAAAAAATATTAATTTATTATTAAAAAATGACAAAGAA TTAACAGTAGATAGTAATATTAAACATTTAAGAGAATCTAAGGTCTATAACAATGCAAGGCTTATTTTTAACGCTACAAA GGATTTAAATACTTTAGTTCATATTAGTAAGGATGGGCTTTTAAAGACTTTAGATGGAAGAAATGTGGGATTTAAAGATA ATAAATTTATTATTTTAGATTCTTTTTTGAATAACGATTTTTATAATAATGTGCCAAGTGAATATACTACTATTGAAATT TATAATAAAAGCATTTTAATGCCTAATTTAAATAAATTTATTCTAGATAAGCGCTCAAATCCTTTTGTTTATCTTGAAGA TTTTAATAAAAACGTTTACTTAAATGATATTCCAAAATTAAGCAAAGAAGAGCTTTTATTTTTATTTTATGAGTTATTTC CAATTTCCAAGCTAAAGAGTTTAAAAGATTGGAATGATTTTGGATTTTCATCTATTTCAAAAACATTAAATAAAATTTAT TCTGAAAAAATAAATTTAAAAAAGGGGAGTGCAAATGAATTGTCAAAGAATTAA
Upstream 100 bases:
>100_bases TGTTAAAAAATCTCTAATTTTAGACAAAGTAATGGGAAGCGACCATTGTCCTGTTTTTTTAGAGTTGGCTGATGTAGTTA GTTAAAGGGAGGAAGCTAGA
Downstream 100 bases:
>100_bases AAATTATTGGAAATTTACAAGCGTTTTTCTATTTTTTTTGTTTTCCTGTGTTTCTAATGATTTAAAGCTAGATAAAAACT TAGTAAAGGGGAAACTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKKNIAIFYLIFSAIFSFGINLNDFDFYRSLEKEELMFFINLLKREQLTLANSCALEYIELAYKALKEKNINLLLKNDKE LTVDSNIKHLRESKVYNNARLIFNATKDLNTLVHISKDGLLKTLDGRNVGFKDNKFIILDSFLNNDFYNNVPSEYTTIEI YNKSILMPNLNKFILDKRSNPFVYLEDFNKNVYLNDIPKLSKEELLFLFYELFPISKLKSLKDWNDFGFSSISKTLNKIY SEKINLKKGSANELSKN
Sequences:
>Translated_257_residues MKKNIAIFYLIFSAIFSFGINLNDFDFYRSLEKEELMFFINLLKREQLTLANSCALEYIELAYKALKEKNINLLLKNDKE LTVDSNIKHLRESKVYNNARLIFNATKDLNTLVHISKDGLLKTLDGRNVGFKDNKFIILDSFLNNDFYNNVPSEYTTIEI YNKSILMPNLNKFILDKRSNPFVYLEDFNKNVYLNDIPKLSKEELLFLFYELFPISKLKSLKDWNDFGFSSISKTLNKIY SEKINLKKGSANELSKN >Mature_257_residues MKKNIAIFYLIFSAIFSFGINLNDFDFYRSLEKEELMFFINLLKREQLTLANSCALEYIELAYKALKEKNINLLLKNDKE LTVDSNIKHLRESKVYNNARLIFNATKDLNTLVHISKDGLLKTLDGRNVGFKDNKFIILDSFLNNDFYNNVPSEYTTIEI YNKSILMPNLNKFILDKRSNPFVYLEDFNKNVYLNDIPKLSKEELLFLFYELFPISKLKSLKDWNDFGFSSISKTLNKIY SEKINLKKGSANELSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30136; Mature: 30136
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNIAIFYLIFSAIFSFGINLNDFDFYRSLEKEELMFFINLLKREQLTLANSCALEYIE CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYKALKEKNINLLLKNDKELTVDSNIKHLRESKVYNNARLIFNATKDLNTLVHISKDGL HHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCC LKTLDGRNVGFKDNKFIILDSFLNNDFYNNVPSEYTTIEIYNKSILMPNLNKFILDKRSN EEECCCCCCCCCCCEEEEEEHHHCCCHHCCCCCCEEEEEEECCEEECCCCHHHHHCCCCC PFVYLEDFNKNVYLNDIPKLSKEELLFLFYELFPISKLKSLKDWNDFGFSSISKTLNKIY CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHH SEKINLKKGSANELSKN HHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKNIAIFYLIFSAIFSFGINLNDFDFYRSLEKEELMFFINLLKREQLTLANSCALEYIE CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYKALKEKNINLLLKNDKELTVDSNIKHLRESKVYNNARLIFNATKDLNTLVHISKDGL HHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCC LKTLDGRNVGFKDNKFIILDSFLNNDFYNNVPSEYTTIEIYNKSILMPNLNKFILDKRSN EEECCCCCCCCCCCEEEEEEHHHCCCHHCCCCCCEEEEEEECCEEECCCCHHHHHCCCCC PFVYLEDFNKNVYLNDIPKLSKEELLFLFYELFPISKLKSLKDWNDFGFSSISKTLNKIY CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHH SEKINLKKGSANELSKN HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA