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The map label for this gene is yidR

Identifier: 51598187

GI number: 51598187

Start: 4657611

End: 4658912

Strand: Direct

Name: yidR

Synonym: YPTB3902

Alternate gene names: 51598187

Gene position: 4657611-4658912 (Clockwise)

Preceding gene: 51598184

Following gene: 51598189

Centisome position: 98.17

GC content: 54.22

Gene sequence:

>1302_bases
ATGAATGCGCAAAAAACCCGTTTCTTACCGGAACAGCAGCTTACCTTTGATCCCAGAGGCCATCAGCTCACCAATATCAA
TGTCTGGACCCCGGATAGCCAGTGGTTGGCTTATGATGTGCGCCCTAGCGGGGGGACTTTTAACGGCTTAACGATTGAGC
GGGTAAATTGCATTACCGGTGAAATTGAGGTGATTTATCGTGCTCGACAGGGTGCTCATGTCGGGGTGGTGACCGTGAGT
CCTGATATGCCCGCACGCTATGTGTTTATCCACGGGCCGGAGCACCCAGATAGCCATTGGCACTACGATTTTCATCATCG
GCGTGGGGTGATTGTGTCTGAGCCGGATAGAGAACTGGCGGTGACCTTAGATGCCATGGATATCACGGCACCGTATACCC
CCGGTGCGTTACGGGGAGGCAGTCATGTGCATGTTTTTAGCCCTGATGGCAGCCGCCTCAGTTTTACGTATAACGACCAT
GTGCTGCATGAGCGGGATCCTGCGCTGGATTGTCGCAATGTTGGTGTTGCCCTGCCGTTACGTGGTGTGAATCCTCCGAA
ACACCACCCTCGTGAGCACGATGGCAGCCACTTTTGTGTCTTGATCAGTTGCACTACACCAACGCCACAGGCTGGTAGCG
ACCAGATTAATCGTGCTTATGAGGAAGGTTGGATAGGCGCGCGGGGTTACGTAAAGGCTGATGGTACTCGCCAGCGTTGG
GCACTGGCATTTATCGGCGATACCTTTTCCGTACAGGGAGAGAAGGTTCCTGAAATTTTTATTGCTGATTTGCCTGAGCA
TGACCGAGATTATGCACGTGCCGGTACACATCCACTTGAGGGAACGGAAAACACGCTACCCGCCCCCCCAGTGGGCGTGA
GCCAGCGGCGGCTAACCTACACCACTGAACGACCTTTCCCTGGGCTGGCAACTCGCCCGCGCCACTGGCTGCGTTCATCG
CCGGATGGCAGTGCCATTGCTTGCCTGATGAACGATGATAACGGTGTGGTGCAGTTATGGTTGATCTCCCCTAATGGCGG
CGAACTGCGTCAACTGACAGCGAGTCAATGGGGGATTCAGTCTGCATTTAGCTGGAGCCCACAGGGAGAGCATTTGGCCT
TTATCTGCGATAACAGCGTGATGTTGTGCGATAGCCTAACCGGACATTTACGGCGGCTGACAGCCCGCAGCGTGGTGGCC
CCGCTGGCTGACGCTGTGGTGTTTTCACCAAACGGTAAAAAGATCGCGTTTATGCGTGAGATCGATGGATGGGCACAAAT
TTTTACTGTGCATGCTGATTAG

Upstream 100 bases:

>100_bases
TGACGGGGCGTTCTGTGTGTCATAATGGCATACATATTCAGCAAAAAATGTCATTTGCAACTTATCATAAAAGAATTAAA
AGCATAAAAGAGTTGAAAAT

Downstream 100 bases:

>100_bases
CATCGACAAGATCTATTGGCTGGAGAGGGGGGAGCGGATCTATTATTTTGGCGTATCACCTGTCTGATTAGTTTGCTGGT
TTTGCATCTCGGATTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNAQKTRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIERVNCITGEIEVIYRARQGAHVGVVTVS
PDMPARYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELAVTLDAMDITAPYTPGALRGGSHVHVFSPDGSRLSFTYNDH
VLHERDPALDCRNVGVALPLRGVNPPKHHPREHDGSHFCVLISCTTPTPQAGSDQINRAYEEGWIGARGYVKADGTRQRW
ALAFIGDTFSVQGEKVPEIFIADLPEHDRDYARAGTHPLEGTENTLPAPPVGVSQRRLTYTTERPFPGLATRPRHWLRSS
PDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVA
PLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD

Sequences:

>Translated_433_residues
MNAQKTRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIERVNCITGEIEVIYRARQGAHVGVVTVS
PDMPARYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELAVTLDAMDITAPYTPGALRGGSHVHVFSPDGSRLSFTYNDH
VLHERDPALDCRNVGVALPLRGVNPPKHHPREHDGSHFCVLISCTTPTPQAGSDQINRAYEEGWIGARGYVKADGTRQRW
ALAFIGDTFSVQGEKVPEIFIADLPEHDRDYARAGTHPLEGTENTLPAPPVGVSQRRLTYTTERPFPGLATRPRHWLRSS
PDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVA
PLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD
>Mature_433_residues
MNAQKTRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIERVNCITGEIEVIYRARQGAHVGVVTVS
PDMPARYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELAVTLDAMDITAPYTPGALRGGSHVHVFSPDGSRLSFTYNDH
VLHERDPALDCRNVGVALPLRGVNPPKHHPREHDGSHFCVLISCTTPTPQAGSDQINRAYEEGWIGARGYVKADGTRQRW
ALAFIGDTFSVQGEKVPEIFIADLPEHDRDYARAGTHPLEGTENTLPAPPVGVSQRRLTYTTERPFPGLATRPRHWLRSS
PDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVA
PLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI308199520, Length=413, Percent_Identity=62.953995157385, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR022223 [H]

Pfam domain/function: PF12566 DUF3748 [H]

EC number: NA

Molecular weight: Translated: 48098; Mature: 48098

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQKTRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIERVNCITG
CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
EIEVIYRARQGAHVGVVTVSPDMPARYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELA
CEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEHHHCCCEEEECCCCEEE
VTLDAMDITAPYTPGALRGGSHVHVFSPDGSRLSFTYNDHVLHERDPALDCRNVGVALPL
EEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEE
RGVNPPKHHPREHDGSHFCVLISCTTPTPQAGSDQINRAYEEGWIGARGYVKADGTRQRW
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEE
ALAFIGDTFSVQGEKVPEIFIADLPEHDRDYARAGTHPLEGTENTLPAPPVGVSQRRLTY
EEEEECCEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
TTERPFPGLATRPRHWLRSSPDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQ
EECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEHHHHCCCC
SAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVAPLADAVVFSPNGKKIAFMRE
CCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEE
IDGWAQIFTVHAD
CCCCEEEEEEECC
>Mature Secondary Structure
MNAQKTRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIERVNCITG
CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
EIEVIYRARQGAHVGVVTVSPDMPARYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELA
CEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEHHHCCCEEEECCCCEEE
VTLDAMDITAPYTPGALRGGSHVHVFSPDGSRLSFTYNDHVLHERDPALDCRNVGVALPL
EEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEE
RGVNPPKHHPREHDGSHFCVLISCTTPTPQAGSDQINRAYEEGWIGARGYVKADGTRQRW
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEE
ALAFIGDTFSVQGEKVPEIFIADLPEHDRDYARAGTHPLEGTENTLPAPPVGVSQRRLTY
EEEEECCEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
TTERPFPGLATRPRHWLRSSPDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQ
EECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEHHHHCCCC
SAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVAPLADAVVFSPNGKKIAFMRE
CCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEE
IDGWAQIFTVHAD
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]