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The map label for this gene is yibD [H]

Identifier: 51598007

GI number: 51598007

Start: 4412538

End: 4413527

Strand: Direct

Name: yibD [H]

Synonym: YPTB3717

Alternate gene names: 51598007

Gene position: 4412538-4413527 (Clockwise)

Preceding gene: 51598006

Following gene: 51598008

Centisome position: 93.0

GC content: 49.49

Gene sequence:

>990_bases
ATGAACAGCGTTGATATCAGCGTCATTGTCCCCGTATACAATTGCGCAAATTATCTTACGGATCTGCTCGACTCACTGCG
CAGCCAAACGGGCGTCTCGCTTGAGATTATTGCCGTTAACGATGGCTCTACCGATCACAGTCTCGCACTACTGGAACAGG
TTGCTCATATTGATTCCCGATTAGTGATTATAAATCAGCAGAATCAGGGGCTTTCTGAGGCCCGCAATGTGGGGATCGCC
AAGGCGAAAGGCAATTGGGTTGCCTTTGCCGATGGTGATGATTGGCTGGCACCCCATGCCCTGTCAACTTGGTTACAGCA
GGTTAAACAGCAGAAGCTGGATGTCTTGATTGGTAACGGCTATCAATTTAGCAGTAACCCCGAGCGAAAACCGGTCACCC
CCTTATTGGGTCAACAGCCTTGGGGAGCGACGCTCAATGGTCAACAATGGATTATCCTCAGTGTTAAACAAAAAGAGTGG
CCACATTATGCCTGGTTGCAACTGATTCGTCGCGATGTGATCAGCACTCACCAATTACAGTTTATTCGCGATATGCTTCA
TGAAGATATTCTGTGGACCACCCAATTAGCACTCGTGGCCCAACGCATCGGGTTCTGTGCCACGCCCTTCTATGGCTACC
GTACTAATCCTGACTCAATCACTAACTCTCCCTCAATGCAGGCACTCCTACGCCGCGCCAGTAGCTACGTTGATATTATC
AACGCACTGGTTAAGATTGCCGCCAGCACCAAACCACCGGTGCGCGATGCCTTGCTATCTCATGCCAATCAAGAAAGTGG
CCATCTTTTAGGGTTATTACGTAAAAAACTACCTACCTCACCACAACGTACCGCATTGGCAATTCGCTTTATCACATTGG
GTCTGCGCCCTGCACTATTCCGTGGTGTAACCAATCTCCATGAACTCTGGCGAGCAATACGTTGCTCATTCTTGATGGGT
TCCTATGCCCGGCAAAAGCGCGCTGAATGA

Upstream 100 bases:

>100_bases
ATATGGCATCGTGAATATAGTCGTGCGAATTGAGTTAGAGTCGCACGACTAGAGCGGCGTGATTTTTCGCGGTCTTATCA
CGCCCAGAGATTAAACAATC

Downstream 100 bases:

>100_bases
ATAAGTTACAAATACTTATTCATTACACTGTATTTCCCTGGCACATATAAGGTTTAATTAAGCCCTGAAGCAATTAATGT
GAATGGACTTAAATGCAGCG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQKEW
PHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQALLRRASSYVDII
NALVKIAASTKPPVRDALLSHANQESGHLLGLLRKKLPTSPQRTALAIRFITLGLRPALFRGVTNLHELWRAIRCSFLMG
SYARQKRAE

Sequences:

>Translated_329_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQKEW
PHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQALLRRASSYVDII
NALVKIAASTKPPVRDALLSHANQESGHLLGLLRKKLPTSPQRTALAIRFITLGLRPALFRGVTNLHELWRAIRCSFLMG
SYARQKRAE
>Mature_329_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQKEW
PHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQALLRRASSYVDII
NALVKIAASTKPPVRDALLSHANQESGHLLGLLRKKLPTSPQRTALAIRFITLGLRPALFRGVTNLHELWRAIRCSFLMG
SYARQKRAE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=223, Percent_Identity=34.0807174887892, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36860; Mature: 36860

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSR
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCE
LVIINQQNQGLSEARNVGIAKAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNG
EEEEECCCCCHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECC
YQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQKEWPHYAWLQLIRRDVISTHQLQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
FIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQALLRRASSYVDII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NALVKIAASTKPPVRDALLSHANQESGHLLGLLRKKLPTSPQRTALAIRFITLGLRPALF
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
RGVTNLHELWRAIRCSFLMGSYARQKRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSR
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCE
LVIINQQNQGLSEARNVGIAKAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNG
EEEEECCCCCHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECC
YQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQKEWPHYAWLQLIRRDVISTHQLQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
FIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQALLRRASSYVDII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NALVKIAASTKPPVRDALLSHANQESGHLLGLLRKKLPTSPQRTALAIRFITLGLRPALF
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
RGVTNLHELWRAIRCSFLMGSYARQKRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]