Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is yheS
Identifier: 51598006
GI number: 51598006
Start: 4410481
End: 4412403
Strand: Direct
Name: yheS
Synonym: YPTB3716
Alternate gene names: 51598006
Gene position: 4410481-4412403 (Clockwise)
Preceding gene: 51598001
Following gene: 51598007
Centisome position: 92.96
GC content: 51.17
Gene sequence:
>1923_bases ATGATTGTTTTTTCCTCGCTTCAAATTCGACGTGGTACTCGCGTCTTGCTGGACAACGCCACAGCTACGATTAACCCCGG TCAGAAAGTCGGCCTGGTTGGCAAGAACGGTTGTGGTAAATCGACTCTGCTGGCGTTGCTCAAAGGCGAACTGAGCGCCG ATGGGGGCAATGTCACATTTCCCAATAACTGGGCACTGGCCTGGGTTAATCAGGAAACCCCGGCACTGGATATCCCGGCG ATAGAGTATGTTATCGACGGTGACCGCGAATATCGCCAGTTGGAGGCCGAACTTCAGGCTGCCAATGAAAAAAATGATGG CCATGCCATCGCAACCGTGCACGGTAAGCTGGATGCCATCCATGCCTGGACTATCCAATCGCGTGCGGCCAGTTTGCTCC ACGGGCTCGGGTTTTCTCAAGAAAAACTACAGCAACCGGTACGTTCATTTTCGGGTGGCTGGCGTATGCGTCTTAATCTG GCGCAGGCGCTGGTTTGCCGCTCTGATTTACTGCTCTTGGATGAACCAACCAACCACTTGGATTTGGATGCCGTCATCTG GCTGGAAAAATGGCTGAAAAGCTACACCGGTACCTTGGTATTAATTTCCCATGACCGCGATTTCCTTGATCCTATTATCG ATAAGATTTTGCATATTGAACAGCAAACGCTGAATGAATATACCGGTAACTATTCATCGTTCGAACGCCAGCGCGCCACC AAACTGTCGCAACAACAATCGATGTATCAGCATCAGCAAGAAAAAGTGGCGCATTTACAAAGTTATATTGATCGCTTCCG GGCGCAAGCCACCAAAGCCAAGCAAGCCCAGAGCCGTATCAAGATGCTCGAGCGTATGGAGCTGATTGCCCCTGCACATG TGGATAATCCGTTCCACTTCAGTTTTCGTACACCAGAAAGCCTGCCAGATCCCTTGCTGCGCATGGATAAAGTCAGTGCC GGTTACGGGGAAAACACCGTCTTACAGTCCATTAAACTCAACCTGGTGCCCGGTTCACGCATCGGTCTCTTGGGGCGTAA TGGTGCCGGTAAATCAACGCTGATTAAATTATTGGCCGGGACGTTAGAACCGCAAAGCGGTGAGATCGCCCTGTCCAAAG GCATTAAACTCGGTTACTTCGCCCAGCATCAGTTGGAGTTCTTACGGGCTGATGAATCACCGTTGCAGCATATGAGCCGC CTGGCCCCTAAAGAGTCAGAGCAGCAATTGCGCGATTATCTCGGTGGTTACGGCTTTCAGGGCGATCAGGTGACCGACCC AACCGCCCGCTTTTCCGGTGGAGAGAAGGCGCGTTTAGTGCTGGCACTGATTATTTGGCAACGGCCGAATCTGTTACTGC TGGATGAGCCCACCAACCATTTGGATTTGGACATGCGACAAGCCCTGACCGAGGCTCTGATTGATTTTGAAGGCGCATTG GTGGTGGTTTCCCATGACCGTCATTTACTGCGCTCTACCACCGATGACCTCTATCTGGTGCACGACGGTAAAGTGGAACA GTTCGATGGCGATCTGGAAGATTATCAGCAGTGGCTGGTGGATTCACAGCGCCAGCAAAGCCAACAGGATAATCCGGCGA AGGAGCTATCGGGCAACAGCGCACAACAGCGTAAAGACCAAAAACGTCGCGATGCTGAATTCCGCACTCAAACGCAGCCA CTGCGTAAGCAGATTATGACGCTGGAAAAACAGATGGATAAACTCAGCACTGAGCTGGCCGCTATCGAAGCACAGTTGGC GGATTCAGCACTGTATGATATTGCGCGCAAAGCGGACTTGACCCAATGCCTACTGCAACAAACGCAAGTGAAATCCAAGC TGGAAGAGACGGAAATGCAGTGGTTAGATGTGCAAGAACAGCTTGAAATACTGACTAAAGAGTTTAGCGATGCCGATATA TAA
Upstream 100 bases:
>100_bases TACTCAAGTCAGTCATTAGGATGAGTGAACGTGGCTAACCCCTGTAACTTCAAGTGCAAAGGGGATGATAATTTAACATA TCCTAAACATACGGCACTCT
Downstream 100 bases:
>100_bases TATCGGAAATATAGATATAACATCGCGAATGTAAATATGGCATCGTGAATATAGTCGTGCGAATTGAGTTAGAGTCGCAC GACTAGAGCGGCGTGATTTT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKGELSADGGNVTFPNNWALAWVNQETPALDIPA IEYVIDGDREYRQLEAELQAANEKNDGHAIATVHGKLDAIHAWTIQSRAASLLHGLGFSQEKLQQPVRSFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLVLISHDRDFLDPIIDKILHIEQQTLNEYTGNYSSFERQRAT KLSQQQSMYQHQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRTPESLPDPLLRMDKVSA GYGENTVLQSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGTLEPQSGEIALSKGIKLGYFAQHQLEFLRADESPLQHMSR LAPKESEQQLRDYLGGYGFQGDQVTDPTARFSGGEKARLVLALIIWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGKVEQFDGDLEDYQQWLVDSQRQQSQQDNPAKELSGNSAQQRKDQKRRDAEFRTQTQP LRKQIMTLEKQMDKLSTELAAIEAQLADSALYDIARKADLTQCLLQQTQVKSKLEETEMQWLDVQEQLEILTKEFSDADI
Sequences:
>Translated_640_residues MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKGELSADGGNVTFPNNWALAWVNQETPALDIPA IEYVIDGDREYRQLEAELQAANEKNDGHAIATVHGKLDAIHAWTIQSRAASLLHGLGFSQEKLQQPVRSFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLVLISHDRDFLDPIIDKILHIEQQTLNEYTGNYSSFERQRAT KLSQQQSMYQHQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRTPESLPDPLLRMDKVSA GYGENTVLQSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGTLEPQSGEIALSKGIKLGYFAQHQLEFLRADESPLQHMSR LAPKESEQQLRDYLGGYGFQGDQVTDPTARFSGGEKARLVLALIIWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGKVEQFDGDLEDYQQWLVDSQRQQSQQDNPAKELSGNSAQQRKDQKRRDAEFRTQTQP LRKQIMTLEKQMDKLSTELAAIEAQLADSALYDIARKADLTQCLLQQTQVKSKLEETEMQWLDVQEQLEILTKEFSDADI >Mature_640_residues MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKGELSADGGNVTFPNNWALAWVNQETPALDIPA IEYVIDGDREYRQLEAELQAANEKNDGHAIATVHGKLDAIHAWTIQSRAASLLHGLGFSQEKLQQPVRSFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLVLISHDRDFLDPIIDKILHIEQQTLNEYTGNYSSFERQRAT KLSQQQSMYQHQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRTPESLPDPLLRMDKVSA GYGENTVLQSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGTLEPQSGEIALSKGIKLGYFAQHQLEFLRADESPLQHMSR LAPKESEQQLRDYLGGYGFQGDQVTDPTARFSGGEKARLVLALIIWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGKVEQFDGDLEDYQQWLVDSQRQQSQQDNPAKELSGNSAQQRKDQKRRDAEFRTQTQP LRKQIMTLEKQMDKLSTELAAIEAQLADSALYDIARKADLTQCLLQQTQVKSKLEETEMQWLDVQEQLEILTKEFSDADI
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=37.6163873370577, Blast_Score=374, Evalue=1e-103, Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=36.2428842504744, Blast_Score=325, Evalue=8e-89, Organism=Homo sapiens, GI27881506, Length=526, Percent_Identity=35.7414448669202, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI69354671, Length=551, Percent_Identity=34.8457350272232, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI10947135, Length=551, Percent_Identity=34.8457350272232, Blast_Score=276, Evalue=3e-74, Organism=Escherichia coli, GI1789751, Length=629, Percent_Identity=81.5580286168522, Blast_Score=1067, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=527, Percent_Identity=33.7760910815939, Blast_Score=308, Evalue=7e-85, Organism=Escherichia coli, GI2367384, Length=528, Percent_Identity=31.0606060606061, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1787182, Length=594, Percent_Identity=27.6094276094276, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=34.0314136125654, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI87081782, Length=553, Percent_Identity=25.1356238698011, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI48994997, Length=248, Percent_Identity=27.0161290322581, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1787164, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=24, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=26.1467889908257, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1787547, Length=200, Percent_Identity=25.5, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=27.536231884058, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786803, Length=218, Percent_Identity=27.0642201834862, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994883, Length=219, Percent_Identity=27.8538812785388, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1787500, Length=305, Percent_Identity=22.9508196721311, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1788506, Length=257, Percent_Identity=24.9027237354086, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1786703, Length=213, Percent_Identity=29.1079812206573, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=38.6792452830189, Blast_Score=358, Evalue=4e-99, Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=35, Blast_Score=328, Evalue=4e-90, Organism=Caenorhabditis elegans, GI17559834, Length=548, Percent_Identity=33.5766423357664, Blast_Score=311, Evalue=5e-85, Organism=Caenorhabditis elegans, GI115533592, Length=267, Percent_Identity=25.0936329588015, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=546, Percent_Identity=35.8974358974359, Blast_Score=348, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=35.1606805293006, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=30.9462915601023, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6324314, Length=400, Percent_Identity=29, Blast_Score=147, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323278, Length=392, Percent_Identity=28.0612244897959, Blast_Score=141, Evalue=3e-34, Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=38.150289017341, Blast_Score=374, Evalue=1e-103, Organism=Drosophila melanogaster, GI24642252, Length=528, Percent_Identity=38.4469696969697, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI18859989, Length=528, Percent_Identity=38.4469696969697, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24641342, Length=533, Percent_Identity=35.0844277673546, Blast_Score=308, Evalue=6e-84, Organism=Drosophila melanogaster, GI116007184, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221500365, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574259, Length=246, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72171; Mature: 72171
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKGELSADGGNVTF CEEECCEEECCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEC PNNWALAWVNQETPALDIPAIEYVIDGDREYRQLEAELQAANEKNDGHAIATVHGKLDAI CCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE HAWTIQSRAASLLHGLGFSQEKLQQPVRSFSGGWRMRLNLAQALVCRSDLLLLDEPTNHL EEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYTGTLVLISHDRDFLDPIIDKILHIEQQTLNEYTGNYSSFERQRAT CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLSQQQSMYQHQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE SFRTPESLPDPLLRMDKVSAGYGENTVLQSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EECCCCCCCCHHHHHHHHCCCCCCHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHH TLEPQSGEIALSKGIKLGYFAQHQLEFLRADESPLQHMSRLAPKESEQQLRDYLGGYGFQ CCCCCCCCEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCC GDQVTDPTARFSGGEKARLVLALIIWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCCCCCCHHHCCCCCHHHHHEEEHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLLRSTTDDLYLVHDGKVEQFDGDLEDYQQWLVDSQRQQSQQDNPAKELSGNS EEEECCCHHHHCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCC AQQRKDQKRRDAEFRTQTQPLRKQIMTLEKQMDKLSTELAAIEAQLADSALYDIARKADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQCLLQQTQVKSKLEETEMQWLDVQEQLEILTKEFSDADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKGELSADGGNVTF CEEECCEEECCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEC PNNWALAWVNQETPALDIPAIEYVIDGDREYRQLEAELQAANEKNDGHAIATVHGKLDAI CCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEE HAWTIQSRAASLLHGLGFSQEKLQQPVRSFSGGWRMRLNLAQALVCRSDLLLLDEPTNHL EEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYTGTLVLISHDRDFLDPIIDKILHIEQQTLNEYTGNYSSFERQRAT CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLSQQQSMYQHQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE SFRTPESLPDPLLRMDKVSAGYGENTVLQSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EECCCCCCCCHHHHHHHHCCCCCCHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHH TLEPQSGEIALSKGIKLGYFAQHQLEFLRADESPLQHMSRLAPKESEQQLRDYLGGYGFQ CCCCCCCCEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCC GDQVTDPTARFSGGEKARLVLALIIWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCCCCCCHHHCCCCCHHHHHEEEHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLLRSTTDDLYLVHDGKVEQFDGDLEDYQQWLVDSQRQQSQQDNPAKELSGNS EEEECCCHHHHCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCC AQQRKDQKRRDAEFRTQTQPLRKQIMTLEKQMDKLSTELAAIEAQLADSALYDIARKADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQCLLQQTQVKSKLEETEMQWLDVQEQLEILTKEFSDADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]