Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is mutL
Identifier: 51594775
GI number: 51594775
Start: 506287
End: 508194
Strand: Direct
Name: mutL
Synonym: YPTB0423
Alternate gene names: 51594775
Gene position: 506287-508194 (Clockwise)
Preceding gene: 51594774
Following gene: 51594776
Centisome position: 10.67
GC content: 50.47
Gene sequence:
>1908_bases ATGCCGATTCAGATTCTGCCTCCACAGCTTGCCAACCAGATTGCCGCCGGTGAGGTGGTAGAGCGGCCTGCATCGGTAGT CAAAGAGTTGGTAGAAAACAGTCTGGATGCGGGTGCTACACGGATTGATATTGATATTGAACGTGGTGGGGCGAAACTTA TTCGCATCCGTGATAATGGCTGCGGCATCAGTAAAGATGATTTGGCACTGGCGTTGGCCCGCCACGCCACCAGCAAAATC AGTTCACTCGAGGATTTAGAAGCCATCCTCAGTATGGGGTTTCGCGGTGAAGCCTTGGCCAGTATCAGTTCAGTTTCACG TCTTATCTTAACCTCACGTACCGCTGAGCAAAGCGAAGCCTGGCAAGCCTATGCCGAAGGTCGCGACATGGCGGTCACCA TCAAGCCTGCGGCACACCCGGTTGGCAGTACACTTGAAGTGTTGGATTTATTTTATAACACCCCCGCGCGCCGCAAATTT ATGCGAACTGAAAAGACGGAGTTTGGTCATATTGATGAGGTCGTCAGGCGCATTGCGCTGGCGCGCTTCGATGTGGCAAT AAATTTGAACCACAATGGTAAGTTAATTCGCCAATATCGTGCGGCACCAGACCCTGCCCAACATGAGCGTCGGTTGGCAA GTATTTGTGGTCCGGCGTTTTTGCAACATGCTTTGGCTATCGCTTGGCAGCACGGGGATTTGAACATTCATGGTTGGGTG GCGGATCCTGCCGCGAGCCATACGCTGAGTGAAATGCAATATTGCTATGTCAATAACCGCATGATGCGTGATCGGTTGAT TAATCACGCGATTCGCCAGGCTTATCAAGATCGACTCAACGATGCTCAACAGCCCGCTTATGTTTTGTATCTGGATATCG ATCCGCATCAGGTTGATGTCAACGTTCATCCGGCTAAGCATGAAGTGCGTTTTCATCAGGCTCGGTTGGTACATGACTTT ATTTATCAGGCAGTCACTGCGGTTTTACAACAAACTAATGCGCCGATACTGAACATCAGTGAAGAAGGTGAAGTTGACGC TCCACGTTGGCAGCAGGAAAACCGGGTAGCGGCTGGCACCAATAAATATGCTCAACCGGAAGCGGCGAAATCCAGTGCGG CGGAGCAGGCTGTGGCTCGCGAGCGTTCGTCTGCCCGTGAACGCGCTGCGCCGGCCTATAAAGAAGATCACCCCTATCAG AAGCAACAAGGGGAGTTATACCGCCAGCTATTGCAACCGTCAGCGGCAGCCAAACCCGCAACATCGCCAGCGGCAATACC TGCGTCATCTGTTTCCTCACCATCCATCCCGGTTCAACGAATTACTCAGGCAGAAGAGCCGCTTCACGGTGATAATTACA GTTTTGGCCGAGTTTTAACGGTTTTTCCACCTTGTTATGCTTTGATTGAATATCAGGGCGGGGTAGCATTGCTATCCTTA GCCGTTGCGGAGCGCTGGTTGAAACAAGCTCAGCTCAGCCCGCCAGAAGAGGGGTTACGCCCTCAACCGTTATTGATTCC ACTCAAAATCACATTAGACAAAAATGAAATAGCGGCTTGTCAGAACCATGAAAAATTGCTAATTACCATGGGAATAGAGC TGAGTGTCGAGCAGGGGCGGGCGACCTTACGTGCGGTTTCTTTACCATTACGCCAACAAAATTTACAAAAACTGATACCG GAACTGTTAGGCTATCTGTCGCAGCATGAAGAGATATCGCCAGATACACTGGCCACATGGCTTGCCCGCCATCTTGGTAG CGAACATGAGGTATGGAATGTGTCTCAAGCGATACAGTTATTGACGGAAGTTGAGCGTCTTTGTCCGCAGTTGGTGCAAT CTCCTCCTGCTGGGCTATTACAACCTATTGATATAAAGGCCGCATTGGCAACTTTGACACATGAATGA
Upstream 100 bases:
>100_bases ATCAATGAGTGAGATTGAGCGGGTGAATAAAATCAAGTCAGGTAATGTTCAGCTTGGGCAAACGCTCACTATTCCACAAT CGTAAGCGCAAGGAATTGTT
Downstream 100 bases:
>100_bases TATTGAGAATCTAGATCGTCCACCGGCAATTTTTATTATGGGGCCAACTGCTTCCGGTAAAACCGCGCTCTCTATTGCGT TGAGGCAGCGATTGCCTGTG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALARHATSKI SSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKF MRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHPAKHEVRFHQARLVHDF IYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGTNKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQ KQQGELYRQLLQPSAAAKPATSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL AVAERWLKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGRATLRAVSLPLRQQNLQKLIP ELLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQLLTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE
Sequences:
>Translated_635_residues MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALARHATSKI SSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKF MRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHPAKHEVRFHQARLVHDF IYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGTNKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQ KQQGELYRQLLQPSAAAKPATSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL AVAERWLKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGRATLRAVSLPLRQQNLQKLIP ELLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQLLTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE >Mature_634_residues PIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGISKDDLALALARHATSKIS SLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFM RTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWVA DPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDVNVHPAKHEVRFHQARLVHDFI YQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGTNKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQK QQGELYRQLLQPSAAAKPATSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSLA VAERWLKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGRATLRAVSLPLRQQNLQKLIPE LLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQLLTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=336, Percent_Identity=35.7142857142857, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4505911, Length=317, Percent_Identity=31.8611987381703, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI189458898, Length=317, Percent_Identity=31.8611987381703, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI189458896, Length=315, Percent_Identity=29.5238095238095, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI4505913, Length=359, Percent_Identity=26.4623955431755, Blast_Score=131, Evalue=3e-30, Organism=Homo sapiens, GI310128478, Length=359, Percent_Identity=26.4623955431755, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI263191589, Length=247, Percent_Identity=30.3643724696356, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI91992162, Length=356, Percent_Identity=23.876404494382, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI91992160, Length=356, Percent_Identity=23.876404494382, Blast_Score=97, Evalue=7e-20, Organism=Homo sapiens, GI310128480, Length=317, Percent_Identity=23.3438485804416, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1790612, Length=639, Percent_Identity=65.1017214397496, Blast_Score=801, Evalue=0.0, Organism=Caenorhabditis elegans, GI71991825, Length=321, Percent_Identity=37.3831775700935, Blast_Score=188, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17562796, Length=344, Percent_Identity=26.7441860465116, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=317, Percent_Identity=36.9085173501577, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6324247, Length=343, Percent_Identity=25.9475218658892, Blast_Score=106, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6325093, Length=290, Percent_Identity=26.8965517241379, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=361, Percent_Identity=24.6537396121884, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI17136968, Length=383, Percent_Identity=33.420365535248, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI17136970, Length=358, Percent_Identity=26.2569832402235, Blast_Score=110, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70289; Mature: 70158
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV HHEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEE ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEE NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCC NKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAKPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC TSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEHHCCCCCHHHHHH AVAERWLKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGR HHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCEEEEHHCH ATLRAVSLPLRQQNLQKLIPELLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCC CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHH WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV HHEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEE ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEE NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCC NKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAKPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC TSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEHHCCCCCHHHHHH AVAERWLKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGR HHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCEEEEHHCH ATLRAVSLPLRQQNLQKLIPELLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA