| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is pstS3 [H]
Identifier: 50841827
GI number: 50841827
Start: 391709
End: 392860
Strand: Reverse
Name: pstS3 [H]
Synonym: PPA0341
Alternate gene names: 50841827
Gene position: 392860-391709 (Counterclockwise)
Preceding gene: 50841828
Following gene: 50841826
Centisome position: 15.34
GC content: 60.68
Gene sequence:
>1152_bases GTGAATCGTTTCGCCAAAATCACTGCCCTGGCTGCTATCAGCGCCATCTCCCTCACCGCTTGTGGTGCCAATGGTGACAA GGGTTCCAGTTCTGCCTCGTCCTCCAAGACCACCTCGACTGCCAGCTCCGCCGCCCAGCCCAGCGATTCCTCGGCTGACG CTGTCTCGTTCAAGCCCGCCTGCCCTGGTGGCAGCATCTCCGGTGCTGGTTCCTCGGCTCAGCTGAACGCCATCAACCAA GTTATTTCCGACTACAAGGCTGCCTGTTCCTCAGCAACCGTCAACTACTCCCCCACCGGCTCCGGCGCTGGCGTGAAGTC CTTCATCGGTAGGCAAACCGACTGGGCCGGTTCTGACTCCGTCCTCAACGCTGACAAGGGGGAGCCTGATAAGGCCAAGC AGCGCTGCAACGCCGACCCATGGCACCTCCCGATGGCTGCTGGCCCGATTGCCGTGGTCTACAACGTCGACGGCGTCAAA GATCTAACCCTCTCCACCGCGACCCTCGCCAAGATTTTCTCCGGCGCCATCACAAACTGGAACGACGACGCCATCAAGAA GGAGAACCCGAAAGCCGCGTTGCCGTCGGCCCAGATCGAGGTGTTTTACCGCAAGGACGAGTCGGGCACCACCGACAACT TCACCAAGTTCCTCAACAAGGCGGCCGGTGACATCTGGACTGAGAAGCACTCCAAGACATGGAAAGGTGCGGGCAAGGGC GCCGATAAGTCGGCCGGCATCGCCCAGGCTGTCAAGAGCACCAAGAACTCGATCTCGTACGACGAGTGGTCCTACGCTAC AAAGAACAGCCTCGACATGGCCGCCATCGATAACGGAAACGGTCCGGTCAAGCTGACCGGTGAGTCTGCCGGTAAGGCCG TCTCGGCCGCTAAGGTCGTCGGACAGGGCCATGACCTGCAGCTCGAGCTCCAGTACAAGAACACCCCGGCGGGCGTGTAT CCGGCCGTTCTCGTAACCTACGAGATCGCTTGTTCCAAGGGCCAGGACTCCGGCAAGGCCGCGCTCTTGAAGGACTTCCT GTCCTTCTACGCTTCTGAGAGGGAGCAGAAGAAGATCCAGGACCTTGGTTACGCTCCGCTACCCTCCGACGTTGCTTCGA AGGTTCTGGGTTCCGCCCAGGCCCTCTCCTGA
Upstream 100 bases:
>100_bases ACCTTGACGCGATCCCTGCGACATTTCCAAACCCTAACGTCATCCCTGTACCAAGGACCGCAACGGCGGCCCCAGTACAT CACTCGAAGAAGGATGTGCC
Downstream 100 bases:
>100_bases TTGACTCTCTGCCCGGGGACAAGCGCCCCGGCGCGCCGGGGCGGGAGGACGCCAGTCGTCTTCCCGCCCCTCACCACAAC ACGACCATGATCGCGACGAA
Product: phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 3; PstS-3 [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPACPGGSISGAGSSAQLNAINQ VISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDSVLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVK DLTLSTATLAKIFSGAITNWNDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVVGQGHDLQLELQYKNTPAGVY PAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQDLGYAPLPSDVASKVLGSAQALS
Sequences:
>Translated_383_residues MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPACPGGSISGAGSSAQLNAINQ VISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDSVLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVK DLTLSTATLAKIFSGAITNWNDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVVGQGHDLQLELQYKNTPAGVY PAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQDLGYAPLPSDVASKVLGSAQALS >Mature_383_residues MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPACPGGSISGAGSSAQLNAINQ VISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDSVLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVK DLTLSTATLAKIFSGAITNWNDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVVGQGHDLQLELQYKNTPAGVY PAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQDLGYAPLPSDVASKVLGSAQALS
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=323, Percent_Identity=29.7213622291022, Blast_Score=92, Evalue=7e-20,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 39547; Mature: 39547
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPA CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC CPGGSISGAGSSAQLNAINQVISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC VLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVKDLTLSTATLAKIFSGAITNW CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC NDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHH GQGHDLQLELQYKNTPAGVYPAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQ CCCCCEEEEEEECCCCCCHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGYAPLPSDVASKVLGSAQALS HCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNRFAKITALAAISAISLTACGANGDKGSSSASSSKTTSTASSAAQPSDSSADAVSFKPA CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC CPGGSISGAGSSAQLNAINQVISDYKAACSSATVNYSPTGSGAGVKSFIGRQTDWAGSDS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC VLNADKGEPDKAKQRCNADPWHLPMAAGPIAVVYNVDGVKDLTLSTATLAKIFSGAITNW CCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC NDDAIKKENPKAALPSAQIEVFYRKDESGTTDNFTKFLNKAAGDIWTEKHSKTWKGAGKG CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADKSAGIAQAVKSTKNSISYDEWSYATKNSLDMAAIDNGNGPVKLTGESAGKAVSAAKVV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHH GQGHDLQLELQYKNTPAGVYPAVLVTYEIACSKGQDSGKAALLKDFLSFYASEREQKKIQ CCCCCEEEEEEECCCCCCHHHHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGYAPLPSDVASKVLGSAQALS HCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA