Definition | Propionibacterium acnes KPA171202, complete genome. |
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Accession | NC_006085 |
Length | 2,560,265 |
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The map label for this gene is 50841818
Identifier: 50841818
GI number: 50841818
Start: 382407
End: 383111
Strand: Reverse
Name: 50841818
Synonym: PPA0332
Alternate gene names: NA
Gene position: 383111-382407 (Counterclockwise)
Preceding gene: 50841820
Following gene: 50841817
Centisome position: 14.96
GC content: 61.42
Gene sequence:
>705_bases ATGTTCACCCTCACCTCAACGCCCGTCACCTTCATCGGGCTATTGATCCTCTTTGCCTGGTCACTCGTATGGTCAGTACG AGATGCCATCAAAGCCCCCACTGTCGTGACACGAATTTCCACCTGGGTCCACGTCGTCATGGCCGTGACCATGATCCTCA TGGTGCCGAAGTCATGGTGGAAACCCATTGTCCCTGCCATCGGCGGCCCCATTACCCCTGTCATCATCTTCGCTATATGC ACCGCATGGATGGTGTTCATGGCCGCGTGGCGATCCTCGTGGTCGTCATGGGGTCACGCCGCGATGTTCGCAGCGATGGT CTGGCACCTGGCCGCGATGCGCAAGATGTCCTCGCTCATGACTGCCCCCCGGGATTCTGGCATGGGCCAGATGAATCACA CGCACAGTGGCATGCATGGTCCCGGCATGCAGACGGCTATGAATGCTGCCATGCACGACTACGCCGTGGTCGGTGTTCCG CTTATGGTCGCCCTGCTAGCCATGGCCGTCGCCGGGCTATGGCGGGCCATCAGCGGCCGCGCGGAAAACCCAGGCAAGGC GCCCACCTGCCACGTAGTCGCTACCGAGCCCCTCGCAATCCGGCTCTCCGGACTCGCTGACTTCGCCATGGCCTTCGGCA TGGCGTGGATGAGCACCGGACTGTTATCCCCTGTCATGCCTTTCACGGCACACCTCCACCCCTGA
Upstream 100 bases:
>100_bases CCACGCGGATCCCGTCAACCTGCTGCAGGCGCGGATCCAGTGATGTCGAGCAATGCCATGTAGGGTGATCGCCAGCCCCA GCCGGTTTCACAGGAGCGGA
Downstream 100 bases:
>100_bases CCTGTGACGTGGAGGCCACCGGTCGATACTGGCAAGCAGCAAAGCCCCCAGACCATCAGGTCCATACGCGGGCACATCAC CGGACAAGCAGAGTCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWWKPIVPAIGGPITPVIIFAIC TAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLMTAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVP LMVALLAMAVAGLWRAISGRAENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP
Sequences:
>Translated_234_residues MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWWKPIVPAIGGPITPVIIFAIC TAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLMTAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVP LMVALLAMAVAGLWRAISGRAENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP >Mature_234_residues MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWWKPIVPAIGGPITPVIIFAIC TAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLMTAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVP LMVALLAMAVAGLWRAISGRAENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25315; Mature: 25315
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 9.8 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 9.8 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KPIVPAIGGPITPVIIFAICTAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVPLMVALLAMAVAGLWRAISGR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFTLTSTPVTFIGLLILFAWSLVWSVRDAIKAPTVVTRISTWVHVVMAVTMILMVPKSWW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KPIVPAIGGPITPVIIFAICTAWMVFMAAWRSSWSSWGHAAMFAAMVWHLAAMRKMSSLM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TAPRDSGMGQMNHTHSGMHGPGMQTAMNAAMHDYAVVGVPLMVALLAMAVAGLWRAISGR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AENPGKAPTCHVVATEPLAIRLSGLADFAMAFGMAWMSTGLLSPVMPFTAHLHP CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA